RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 RGS13O14921 159 aa11.25□□□□□ -0.61
DDX55-212ENST00000544738 ZNF138P52744 262 aa11.25□□□□□ -0.61
DDX55-212ENST00000544738 TAS2R45P59539 299 aa11.25□□□□□ -0.61
DDX55-212ENST00000544738 FFAR4Q5NUL3 377 aa11.25□□□□□ -0.61
DDX55-212ENST00000544738 IBA57Q5T440 356 aaKnown RBP11.25□□□□□ -0.61
DDX55-212ENST00000544738 ZFAND2AQ8N6M9 145 aa11.25□□□□□ -0.61
DDX55-212ENST00000544738 TMPRSS5Q9H3S3 457 aa11.25□□□□□ -0.61
DDX55-212ENST00000544738 Q9H8V8 135 aa11.25□□□□□ -0.61
DDX55-212ENST00000544738 TCL1AP56279 114 aa11.24□□□□□ -0.61
DDX55-212ENST00000544738 RANP62826 216 aaKnown RBP11.24□□□□□ -0.61
DDX55-212ENST00000544738 KHDC3LQ587J8 217 aa11.24□□□□□ -0.61
DDX55-212ENST00000544738 PHYHIPLQ96FC7 376 aa11.24□□□□□ -0.61
DDX55-212ENST00000544738 FLG2Q5D862 2391 aaPredicted RBP11.24□□□□□ -0.61
DDX55-212ENST00000544738 IGHV1OR15-1A0A075B7D0 117 aa11.23□□□□□ -0.61
DDX55-212ENST00000544738 TRGV1A0A0A0MS02 117 aa11.23□□□□□ -0.61
DDX55-212ENST00000544738 UBE2L3P68036 154 aaKnown RBP11.23□□□□□ -0.61
DDX55-212ENST00000544738 TTC32Q5I0X7 151 aa11.23□□□□□ -0.61
DDX55-212ENST00000544738 Q9H3A6 140 aa11.23□□□□□ -0.61
DDX55-212ENST00000544738 MBD2Q9UBB5 411 aa11.23□□□□□ -0.61
DDX55-212ENST00000544738 SPINK4O60575 86 aa11.22□□□□□ -0.61
DDX55-212ENST00000544738 ARPC5LQ9BPX5 153 aa11.22□□□□□ -0.61
DDX55-212ENST00000544738 UPK3BQ9BT76 320 aa11.22□□□□□ -0.61
DDX55-212ENST00000544738 SMIM3Q9BZL3 60 aa11.22□□□□□ -0.61
DDX55-212ENST00000544738 BATF3Q9NR55 127 aa11.22□□□□□ -0.61
DDX55-212ENST00000544738 KLF12Q9Y4X4 402 aa11.22□□□□□ -0.61
DDX55-212ENST00000544738 LENEPQ9Y5L5 61 aa11.22□□□□□ -0.61
DDX55-212ENST00000544738 KRTAP10-2P60368 255 aa11.21□□□□□ -0.61
DDX55-212ENST00000544738 ESRGQ1W209 222 aa11.21□□□□□ -0.61
DDX55-212ENST00000544738 PRR9Q5T870 116 aa11.21□□□□□ -0.61
DDX55-212ENST00000544738 A0A1W2PPV4 95 aa11.2□□□□□ -0.62
DDX55-212ENST00000544738 ZNF266Q14584 549 aa11.2□□□□□ -0.62
DDX55-212ENST00000544738 ACOT6Q3I5F7 207 aaPredicted RBP11.2□□□□□ -0.62
DDX55-212ENST00000544738 FAM74A1Q5RGS3 127 aa11.2□□□□□ -0.62
DDX55-212ENST00000544738 Q8TAT8 98 aa11.2□□□□□ -0.62
DDX55-212ENST00000544738 VSIG2Q96IQ7 327 aa11.2□□□□□ -0.62
DDX55-212ENST00000544738 ST6GAL2Q96JF0 529 aa11.2□□□□□ -0.62
DDX55-212ENST00000544738 TP53TG3Q9ULZ0 132 aa11.2□□□□□ -0.62
DDX55-212ENST00000544738 MRPS16Q9Y3D3 137 aaKnown RBP11.2□□□□□ -0.62
DDX55-212ENST00000544738 VPS13BQ7Z7G8 4022 aa11.19□□□□□ -0.62
DDX55-212ENST00000544738 A0A1W2PPQ1 181 aa11.19□□□□□ -0.62
DDX55-212ENST00000544738 DIRC3C9JPN6 131 aa11.19□□□□□ -0.62
DDX55-212ENST00000544738 ZNF415Q09FC8 603 aa11.19□□□□□ -0.62
DDX55-212ENST00000544738 SLAQ13239 276 aa11.19□□□□□ -0.62
DDX55-212ENST00000544738 PQLC2Q6ZP29 291 aa11.19□□□□□ -0.62
DDX55-212ENST00000544738 CMTM2Q8TAZ6 248 aa11.19□□□□□ -0.62
DDX55-212ENST00000544738 TMED6Q8WW62 240 aa11.19□□□□□ -0.62
DDX55-212ENST00000544738 A0A096LPF7 62 aa11.18□□□□□ -0.62
DDX55-212ENST00000544738 ARL6IP6Q8N6S5 226 aa11.18□□□□□ -0.62
DDX55-212ENST00000544738 WFDC1Q9HC57 220 aa11.18□□□□□ -0.62
DDX55-212ENST00000544738 OTORQ9NRC9 128 aa11.18□□□□□ -0.62
DDX55-212ENST00000544738 PRO0255Q9UI72 69 aa11.18□□□□□ -0.62
DDX55-212ENST00000544738 PGPA6NDG6 321 aa11.17□□□□□ -0.62
DDX55-212ENST00000544738 PAX4O43316 350 aa11.17□□□□□ -0.62
DDX55-212ENST00000544738 BTF3P20290 206 aaKnown RBP11.17□□□□□ -0.62
DDX55-212ENST00000544738 Q6AWC8 147 aa11.17□□□□□ -0.62
DDX55-212ENST00000544738 FAM159AQ6UWV7 190 aa11.17□□□□□ -0.62
DDX55-212ENST00000544738 Q6ZQT7 251 aa11.17□□□□□ -0.62
DDX55-212ENST00000544738 HYLS1Q96M11 299 aa11.17□□□□□ -0.62
DDX55-212ENST00000544738 SPXQ9BT56 116 aa11.17□□□□□ -0.62
DDX55-212ENST00000544738 MRPL16Q9NX20 251 aaKnown RBP11.17□□□□□ -0.62
DDX55-212ENST00000544738 ICOSQ9Y6W8 199 aa11.17□□□□□ -0.62
DDX55-212ENST00000544738 MUC21Q5SSG8 566 aa11.16□□□□□ -0.62
DDX55-212ENST00000544738 Q5VSD8 79 aa11.16□□□□□ -0.62
DDX55-212ENST00000544738 OR10G4Q8NGN3 311 aa11.16□□□□□ -0.62
DDX55-212ENST00000544738 OR10G9Q8NGN4 311 aa11.16□□□□□ -0.62
DDX55-212ENST00000544738 OR10G7Q8NGN6 311 aa11.16□□□□□ -0.62
DDX55-212ENST00000544738 ALG5Q9Y673 324 aa11.16□□□□□ -0.62
DDX55-212ENST00000544738 TRGV11A0A075B6L2 103 aa11.15□□□□□ -0.62
DDX55-212ENST00000544738 HHLA3Q9XRX5 114 aa11.15□□□□□ -0.62
DDX55-212ENST00000544738 PTTG1O95997 202 aa11.14□□□□□ -0.63
DDX55-212ENST00000544738 IGHV3-53P01767 116 aa11.14□□□□□ -0.63
DDX55-212ENST00000544738 RAB2AP61019 212 aa11.14□□□□□ -0.63
DDX55-212ENST00000544738 MRPL23Q16540 153 aaKnown RBP11.14□□□□□ -0.63
DDX55-212ENST00000544738 TDRG1Q3Y452 100 aa11.14□□□□□ -0.63
DDX55-212ENST00000544738 FRZBQ92765 325 aa11.14□□□□□ -0.63
DDX55-212ENST00000544738 KRTAP1-5Q9BYS1 174 aa11.14□□□□□ -0.63
DDX55-212ENST00000544738 MDFICQ9P1T7 246 aa11.14□□□□□ -0.63
DDX55-212ENST00000544738 RPH3ALQ9UNE2 315 aa11.14□□□□□ -0.63
DDX55-212ENST00000544738 TRGV4A0A0C4DH28 118 aa11.13□□□□□ -0.63
DDX55-212ENST00000544738 J3QL48 77 aa11.13□□□□□ -0.63
DDX55-212ENST00000544738 CRYBA4P53673 196 aa11.13□□□□□ -0.63
DDX55-212ENST00000544738 FHL2Q14192 279 aa11.13□□□□□ -0.63
DDX55-212ENST00000544738 TMEM183BQ1AE95 376 aa11.13□□□□□ -0.63
DDX55-212ENST00000544738 GOLT1AQ6ZVE7 132 aa11.13□□□□□ -0.63
DDX55-212ENST00000544738 IQCF2Q8IXL9 164 aa11.13□□□□□ -0.63
DDX55-212ENST00000544738 TMEM183AQ8IXX5 376 aa11.13□□□□□ -0.63
DDX55-212ENST00000544738 OR2G3Q8NGZ4 309 aa11.13□□□□□ -0.63
DDX55-212ENST00000544738 RASL10AQ92737 203 aa11.13□□□□□ -0.63
DDX55-212ENST00000544738 MED28Q9H204 178 aa11.13□□□□□ -0.63
DDX55-212ENST00000544738 TRAV21A0A0B4J279 112 aa11.12□□□□□ -0.63
DDX55-212ENST00000544738 SIVA1O15304 175 aa11.12□□□□□ -0.63
DDX55-212ENST00000544738 EIF3GO75821 320 aaKnown RBP eCLIP11.12□□□□□ -0.63
DDX55-212ENST00000544738 CDC34P49427 236 aaPredicted RBP11.12□□□□□ -0.63
DDX55-212ENST00000544738 HSD17B11Q8NBQ5 300 aa11.12□□□□□ -0.63
DDX55-212ENST00000544738 C8orf49Q96NF6 230 aa11.12□□□□□ -0.63
DDX55-212ENST00000544738 AQP10Q96PS8 301 aa11.12□□□□□ -0.63
DDX55-212ENST00000544738 PSMG3Q9BT73 122 aaPredicted RBP11.12□□□□□ -0.63
DDX55-212ENST00000544738 SERTM2A0A1B0GWG4 89 aa11.11□□□□□ -0.63
DDX55-212ENST00000544738 MBP02144 154 aa11.11□□□□□ -0.63
DDX55-212ENST00000544738 XGP55808 180 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms