RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 FBLL1A6NHQ2 334 aaKnown RBP9.79□□□□□ -0.84
LTBR-213ENST00000544454 LYRM9A8MSI8 78 aa9.79□□□□□ -0.84
LTBR-213ENST00000544454 IFNA7P01567 189 aa9.79□□□□□ -0.84
LTBR-213ENST00000544454 UBE2G2P60604 165 aa9.79□□□□□ -0.84
LTBR-213ENST00000544454 Q6ZTC4 211 aa9.79□□□□□ -0.84
LTBR-213ENST00000544454 RNASE8Q8TDE3 154 aaKnown RBP9.79□□□□□ -0.84
LTBR-213ENST00000544454 TMEM263Q8WUH6 116 aaKnown RBP9.79□□□□□ -0.84
LTBR-213ENST00000544454 ATG101Q9BSB4 218 aa9.79□□□□□ -0.84
LTBR-213ENST00000544454 ARL2-SNX15V9GYD0 113 aa9.79□□□□□ -0.84
LTBR-213ENST00000544454 TRAV8-1A0A0A6YYK1 113 aa9.78□□□□□ -0.84
LTBR-213ENST00000544454 TRAV10A0A0B4J240 114 aa9.78□□□□□ -0.84
LTBR-213ENST00000544454 PLAC8L1A1L4L8 177 aa9.78□□□□□ -0.84
LTBR-213ENST00000544454 SULT1A2P50226 295 aa9.78□□□□□ -0.84
LTBR-213ENST00000544454 PRR9Q5T870 116 aa9.78□□□□□ -0.84
LTBR-213ENST00000544454 CYB561D1Q8N8Q1 229 aa9.78□□□□□ -0.84
LTBR-213ENST00000544454 HIST1H2BAQ96A08 127 aa9.78□□□□□ -0.84
LTBR-213ENST00000544454 TIMM8BQ9Y5J9 83 aaPredicted RBP9.78□□□□□ -0.84
LTBR-213ENST00000544454 TRAV1-1A0A0B4J248 108 aa9.77□□□□□ -0.85
LTBR-213ENST00000544454 PPT1P50897 306 aa9.77□□□□□ -0.85
LTBR-213ENST00000544454 ANXA2RQ3ZCQ2 193 aa9.77□□□□□ -0.85
LTBR-213ENST00000544454 EIF4E3Q8N5X7 224 aaKnown RBP9.77□□□□□ -0.85
LTBR-213ENST00000544454 TMEM75Q8N9X5 138 aa9.77□□□□□ -0.85
LTBR-213ENST00000544454 C2CD4CQ8TF44 421 aa9.77□□□□□ -0.85
LTBR-213ENST00000544454 TCEAL7Q9BRU2 100 aa9.77□□□□□ -0.85
LTBR-213ENST00000544454 NDFIP1Q9BT67 221 aa9.77□□□□□ -0.85
LTBR-213ENST00000544454 TREM1Q9NP99 234 aa9.77□□□□□ -0.85
LTBR-213ENST00000544454 PSG8Q9UQ74 426 aa9.77□□□□□ -0.85
LTBR-213ENST00000544454 F6UZH7 168 aa9.76□□□□□ -0.85
LTBR-213ENST00000544454 TEX46H3BTG2 121 aa9.76□□□□□ -0.85
LTBR-213ENST00000544454 RGS13O14921 159 aa9.76□□□□□ -0.85
LTBR-213ENST00000544454 IGLV2-11P01706 119 aa9.76□□□□□ -0.85
LTBR-213ENST00000544454 CST9LP1Q5W188 147 aa9.76□□□□□ -0.85
LTBR-213ENST00000544454 Q6AWC8 147 aa9.76□□□□□ -0.85
LTBR-213ENST00000544454 ZNF767PQ75MW2 155 aa9.76□□□□□ -0.85
LTBR-213ENST00000544454 ZNF680Q8NEM1 530 aa9.76□□□□□ -0.85
LTBR-213ENST00000544454 TVP23CQ96ET8 276 aa9.76□□□□□ -0.85
LTBR-213ENST00000544454 IGHV1OR15-1A0A075B7D0 117 aa9.75□□□□□ -0.85
LTBR-213ENST00000544454 DEFB131BA0A096LNP1 70 aa9.75□□□□□ -0.85
LTBR-213ENST00000544454 CBY3A6NI87 242 aa9.75□□□□□ -0.85
LTBR-213ENST00000544454 PEX7O00628 323 aa9.75□□□□□ -0.85
LTBR-213ENST00000544454 PAGE4O60829 102 aa9.75□□□□□ -0.85
LTBR-213ENST00000544454 TCTAP57738 103 aa9.75□□□□□ -0.85
LTBR-213ENST00000544454 DAD1P61803 113 aa9.75□□□□□ -0.85
LTBR-213ENST00000544454 FLI1Q01543 452 aaPredicted RBP9.75□□□□□ -0.85
LTBR-213ENST00000544454 DAZ2Q13117 558 aaKnown RBP9.75□□□□□ -0.85
LTBR-213ENST00000544454 SAPCD1Q5SSQ6 148 aa9.75□□□□□ -0.85
LTBR-213ENST00000544454 Q6ZQT7 251 aa9.75□□□□□ -0.85
LTBR-213ENST00000544454 SGK494Q96LW2 274 aa9.75□□□□□ -0.85
LTBR-213ENST00000544454 LINC00479Q96M42 142 aa9.75□□□□□ -0.85
LTBR-213ENST00000544454 NOP10Q9NPE3 64 aaKnown RBP9.75□□□□□ -0.85
LTBR-213ENST00000544454 TRAV21A0A0B4J279 112 aa9.74□□□□□ -0.85
LTBR-213ENST00000544454 A0A1B0GV50 99 aa9.74□□□□□ -0.85
LTBR-213ENST00000544454 SNURFLB1AK76 121 aa9.74□□□□□ -0.85
LTBR-213ENST00000544454 NKX2-5P52952 324 aaPredicted RBP9.74□□□□□ -0.85
LTBR-213ENST00000544454 PRNTQ86SH4 94 aa9.74□□□□□ -0.85
LTBR-213ENST00000544454 KLF12Q9Y4X4 402 aa9.74□□□□□ -0.85
LTBR-213ENST00000544454 TRAV34A0A0B4J273 112 aa9.73□□□□□ -0.85
LTBR-213ENST00000544454 DEFB130BP0DP73 79 aa9.73□□□□□ -0.85
LTBR-213ENST00000544454 DEFB130AP0DP74 79 aa9.73□□□□□ -0.85
LTBR-213ENST00000544454 CCL20P78556 96 aa9.73□□□□□ -0.85
LTBR-213ENST00000544454 IBA57Q5T440 356 aaKnown RBP9.73□□□□□ -0.85
LTBR-213ENST00000544454 FAM159AQ6UWV7 190 aa9.73□□□□□ -0.85
LTBR-213ENST00000544454 C11orf72Q8NBR9 251 aa9.73□□□□□ -0.85
LTBR-213ENST00000544454 SACSQ9NZJ4 4579 aa9.72□□□□□ -0.85
LTBR-213ENST00000544454 LYSTQ99698 3801 aa9.72□□□□□ -0.85
LTBR-213ENST00000544454 LCE6AA0A183 80 aa9.72□□□□□ -0.85
LTBR-213ENST00000544454 IGLL5B9A064 214 aa9.72□□□□□ -0.85
LTBR-213ENST00000544454 ATP5G3P48201 142 aa9.72□□□□□ -0.85
LTBR-213ENST00000544454 TDRG1Q3Y452 100 aa9.72□□□□□ -0.85
LTBR-213ENST00000544454 SMUG1Q53HV7 270 aa9.72□□□□□ -0.85
LTBR-213ENST00000544454 LINC00612Q8N6U2 182 aa9.72□□□□□ -0.85
LTBR-213ENST00000544454 FAM210BQ96KR6 192 aa9.72□□□□□ -0.85
LTBR-213ENST00000544454 MANBALQ9NQG1 85 aa9.72□□□□□ -0.85
LTBR-213ENST00000544454 GSN-AS1Q9NRJ2 163 aa9.72□□□□□ -0.85
LTBR-213ENST00000544454 ZFP30Q9Y2G7 519 aa9.72□□□□□ -0.85
LTBR-213ENST00000544454 TRBV6-1A0A0K0K1D8 114 aa9.71□□□□□ -0.86
LTBR-213ENST00000544454 TCL1AP56279 114 aa9.71□□□□□ -0.86
LTBR-213ENST00000544454 MUC21Q5SSG8 566 aa9.71□□□□□ -0.86
LTBR-213ENST00000544454 FMC1Q96HJ9 113 aa9.71□□□□□ -0.86
LTBR-213ENST00000544454 GNG13Q9P2W3 67 aa9.71□□□□□ -0.86
LTBR-213ENST00000544454 TP53TG3Q9ULZ0 132 aa9.71□□□□□ -0.86
LTBR-213ENST00000544454 GCGP01275 180 aa9.7□□□□□ -0.86
LTBR-213ENST00000544454 S100A9P06702 114 aaKnown RBP9.7□□□□□ -0.86
LTBR-213ENST00000544454 PFN1P07737 140 aaKnown RBP9.7□□□□□ -0.86
LTBR-213ENST00000544454 TMEM183BQ1AE95 376 aa9.7□□□□□ -0.86
LTBR-213ENST00000544454 ALKAL2Q6UX46 152 aa9.7□□□□□ -0.86
LTBR-213ENST00000544454 COX8CQ7Z4L0 72 aa9.7□□□□□ -0.86
LTBR-213ENST00000544454 KCNS1Q96KK3 526 aa9.7□□□□□ -0.86
LTBR-213ENST00000544454 C8orf49Q96NF6 230 aa9.7□□□□□ -0.86
LTBR-213ENST00000544454 TXNDC17Q9BRA2 123 aa9.7□□□□□ -0.86
LTBR-213ENST00000544454 TRGV11A0A075B6L2 103 aa9.69□□□□□ -0.86
LTBR-213ENST00000544454 IGHV4-4A0A075B6R2 117 aa9.69□□□□□ -0.86
LTBR-213ENST00000544454 SPINK4O60575 86 aa9.69□□□□□ -0.86
LTBR-213ENST00000544454 ATP5G1P05496 136 aa9.69□□□□□ -0.86
LTBR-213ENST00000544454 HTN3P15516 51 aa9.69□□□□□ -0.86
LTBR-213ENST00000544454 ZNF80P51504 273 aaPredicted RBP9.69□□□□□ -0.86
LTBR-213ENST00000544454 UBE2G1P62253 170 aa9.69□□□□□ -0.86
LTBR-213ENST00000544454 BLOC1S1P78537 153 aa9.69□□□□□ -0.86
LTBR-213ENST00000544454 ZNF415Q09FC8 603 aa9.69□□□□□ -0.86
LTBR-213ENST00000544454 LGALS9BQ3B8N2 356 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms