RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 IGLC3P0DOY3 106 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 BLCAPP62952 87 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 USMG5Q96IX5 58 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 U3KQK5 164 aa10.66□□□□□ -0.7
MSH2-206ENST00000543555 AKAP9Q99996 3911 aa10.65□□□□□ -0.7
MSH2-206ENST00000543555 MAJINQ3KP22 176 aa10.65□□□□□ -0.7
MSH2-206ENST00000543555 KLHDC1Q8N7A1 406 aa10.65□□□□□ -0.7
MSH2-206ENST00000543555 D6R8Y8 96 aa10.65□□□□□ -0.71
MSH2-206ENST00000543555 SYS1-DBNDD2H3BUS1 97 aa10.65□□□□□ -0.71
MSH2-206ENST00000543555 NDUFA4O00483 81 aa10.65□□□□□ -0.71
MSH2-206ENST00000543555 LINC01559Q495D7 138 aa10.65□□□□□ -0.71
MSH2-206ENST00000543555 UNQ9165/PRO28630Q6UXU0 137 aa10.65□□□□□ -0.71
MSH2-206ENST00000543555 AP5S1Q9NUS5 200 aa10.65□□□□□ -0.71
MSH2-206ENST00000543555 UQCR10Q9UDW1 63 aa10.65□□□□□ -0.71
MSH2-206ENST00000543555 CUBNO60494 3623 aa10.64□□□□□ -0.71
MSH2-206ENST00000543555 TRAV9-2A0A087WT02 112 aa10.64□□□□□ -0.71
MSH2-206ENST00000543555 TWIST1Q15672 202 aa10.64□□□□□ -0.71
MSH2-206ENST00000543555 TMEM78Q5T7P6 136 aa10.64□□□□□ -0.71
MSH2-206ENST00000543555 MXRA5Q9NR99 2828 aa10.64□□□□□ -0.71
MSH2-206ENST00000543555 MRPL51Q4U2R6 128 aaKnown RBP10.64□□□□□ -0.71
MSH2-206ENST00000543555 Q6ZS46 218 aa10.64□□□□□ -0.71
MSH2-206ENST00000543555 ORMDL3Q8N138 153 aa10.64□□□□□ -0.71
MSH2-206ENST00000543555 PRSS3P2Q8NHM4 247 aa10.64□□□□□ -0.71
MSH2-206ENST00000543555 KLK15Q9H2R5 256 aa10.64□□□□□ -0.71
MSH2-206ENST00000543555 GATA3P23771 443 aa10.63□□□□□ -0.71
MSH2-206ENST00000543555 NUTF2P61970 127 aaKnown RBP10.63□□□□□ -0.71
MSH2-206ENST00000543555 FA2HQ7L5A8 372 aa10.63□□□□□ -0.71
MSH2-206ENST00000543555 CNFNQ9BYD5 112 aa10.63□□□□□ -0.71
MSH2-206ENST00000543555 SMAD7O15105 426 aaKnown RBP10.63□□□□□ -0.71
MSH2-206ENST00000543555 IGHV3-11P01762 117 aa10.63□□□□□ -0.71
MSH2-206ENST00000543555 PF4V1P10720 104 aa10.63□□□□□ -0.71
MSH2-206ENST00000543555 SLC25A16P16260 332 aa10.63□□□□□ -0.71
MSH2-206ENST00000543555 C9orf47Q6ZRZ4 202 aa10.63□□□□□ -0.71
MSH2-206ENST00000543555 C16orf92Q96LL3 132 aa10.63□□□□□ -0.71
MSH2-206ENST00000543555 PRELID3AQ96N28 172 aa10.63□□□□□ -0.71
MSH2-206ENST00000543555 HSPB8Q9UJY1 196 aa10.63□□□□□ -0.71
MSH2-206ENST00000543555 C20orf202A1L168 122 aa10.63□□□□□ -0.71
MSH2-206ENST00000543555 C9orf139Q6ZV77 190 aa10.63□□□□□ -0.71
MSH2-206ENST00000543555 MTORP42345 2549 aa10.62□□□□□ -0.71
MSH2-206ENST00000543555 IFI27P40305 119 aaPredicted RBP10.62□□□□□ -0.71
MSH2-206ENST00000543555 HIST1H1AQ02539 215 aaPredicted RBP10.62□□□□□ -0.71
MSH2-206ENST00000543555 MAP1LC3CQ9BXW4 147 aa10.62□□□□□ -0.71
MSH2-206ENST00000543555 OR4C46A6NHA9 309 aa10.62□□□□□ -0.71
MSH2-206ENST00000543555 RNF223E7ERA6 249 aa10.62□□□□□ -0.71
MSH2-206ENST00000543555 IGLV1-40P01703 118 aa10.62□□□□□ -0.71
MSH2-206ENST00000543555 TMEM191AQ9H0A3 160 aa10.62□□□□□ -0.71
MSH2-206ENST00000543555 IGKV3D-20A0A0C4DH25 116 aa10.61□□□□□ -0.71
MSH2-206ENST00000543555 OR4X2Q8NGF9 303 aa10.61□□□□□ -0.71
MSH2-206ENST00000543555 PPP1R14DQ9NXH3 145 aa10.61□□□□□ -0.71
MSH2-206ENST00000543555 SIGLEC8Q9NYZ4 499 aa10.61□□□□□ -0.71
MSH2-206ENST00000543555 IGLL1P15814 213 aa10.61□□□□□ -0.71
MSH2-206ENST00000543555 MSRB1Q9NZV6 116 aa10.61□□□□□ -0.71
MSH2-206ENST00000543555 C11orf21Q9P2W6 132 aa10.61□□□□□ -0.71
MSH2-206ENST00000543555 OTOGQ6ZRI0 2925 aa10.61□□□□□ -0.71
MSH2-206ENST00000543555 LOC389332A0A1B0GUA5 103 aa10.6□□□□□ -0.71
MSH2-206ENST00000543555 CFHR3Q02985 330 aa10.6□□□□□ -0.71
MSH2-206ENST00000543555 PET117Q6UWS5 81 aa10.6□□□□□ -0.71
MSH2-206ENST00000543555 Q6ZN92 141 aa10.6□□□□□ -0.71
MSH2-206ENST00000543555 GPHB5Q86YW7 130 aa10.6□□□□□ -0.71
MSH2-206ENST00000543555 LINC01356Q8N9X3 169 aa10.6□□□□□ -0.71
MSH2-206ENST00000543555 OR10AG1Q8NH19 301 aa10.6□□□□□ -0.71
MSH2-206ENST00000543555 C20orf173Q96LM9 149 aa10.6□□□□□ -0.71
MSH2-206ENST00000543555 CKS2P33552 79 aa10.6□□□□□ -0.71
MSH2-206ENST00000543555 LCNL1Q6ZST4 164 aa10.6□□□□□ -0.71
MSH2-206ENST00000543555 NPFFR1Q9GZQ6 430 aa10.6□□□□□ -0.71
MSH2-206ENST00000543555 TIMM8BQ9Y5J9 83 aaPredicted RBP10.6□□□□□ -0.71
MSH2-206ENST00000543555 A0A0G2JLM5 398 aa10.6□□□□□ -0.71
MSH2-206ENST00000543555 HNRNPA3P51991 378 aaKnown RBP10.6□□□□□ -0.71
MSH2-206ENST00000543555 DEFB113Q30KQ7 82 aa10.6□□□□□ -0.71
MSH2-206ENST00000543555 FAM106AQ4KMX7 169 aa10.6□□□□□ -0.71
MSH2-206ENST00000543555 Q5PR19 223 aa10.6□□□□□ -0.71
MSH2-206ENST00000543555 WFDC11Q8NEX6 87 aa10.6□□□□□ -0.71
MSH2-206ENST00000543555 A0A096LNT2 108 aa10.59□□□□□ -0.71
MSH2-206ENST00000543555 ZNF738Q8NE65 137 aa10.59□□□□□ -0.71
MSH2-206ENST00000543555 RNF185Q96GF1 192 aa10.59□□□□□ -0.71
MSH2-206ENST00000543555 ZNF747Q9BV97 191 aa10.59□□□□□ -0.71
MSH2-206ENST00000543555 SMKR1H3BMG3 65 aa10.59□□□□□ -0.71
MSH2-206ENST00000543555 SOCS3O14543 225 aa10.59□□□□□ -0.71
MSH2-206ENST00000543555 LOXL1Q08397 574 aaPredicted RBP10.59□□□□□ -0.71
MSH2-206ENST00000543555 A0A096LNJ9 63 aa10.58□□□□□ -0.72
MSH2-206ENST00000543555 NPYP01303 97 aa10.58□□□□□ -0.72
MSH2-206ENST00000543555 Q96MF0 132 aa10.58□□□□□ -0.72
MSH2-206ENST00000543555 LENEPQ9Y5L5 61 aa10.58□□□□□ -0.72
MSH2-206ENST00000543555 NCR2O95944 276 aa10.58□□□□□ -0.72
MSH2-206ENST00000543555 IGHV4-59P01825 116 aa10.58□□□□□ -0.72
MSH2-206ENST00000543555 FOXE3Q13461 319 aa10.58□□□□□ -0.72
MSH2-206ENST00000543555 DEFB112Q30KQ8 113 aa10.58□□□□□ -0.72
MSH2-206ENST00000543555 ZNF580Q9UK33 172 aa10.58□□□□□ -0.72
MSH2-206ENST00000543555 RPLP1P05386 114 aaKnown RBP10.58□□□□□ -0.72
MSH2-206ENST00000543555 BATFQ16520 125 aa10.58□□□□□ -0.72
MSH2-206ENST00000543555 TMEM95Q3KNT9 176 aa10.57□□□□□ -0.72
MSH2-206ENST00000543555 IGHV7-4-1A0A0J9YVY3 117 aa10.57□□□□□ -0.72
MSH2-206ENST00000543555 H0Y8G0 127 aa10.57□□□□□ -0.72
MSH2-206ENST00000543555 PPBPP02775 128 aa10.57□□□□□ -0.72
MSH2-206ENST00000543555 TSPOP30536 169 aa10.57□□□□□ -0.72
MSH2-206ENST00000543555 LINC01545Q5VT33 79 aa10.57□□□□□ -0.72
MSH2-206ENST00000543555 PRSS57Q6UWY2 283 aa10.57□□□□□ -0.72
MSH2-206ENST00000543555 MCRIP2Q9BUT9 160 aaKnown RBP10.57□□□□□ -0.72
MSH2-206ENST00000543555 hDV102S1A0JD36 115 aa10.56□□□□□ -0.72
MSH2-206ENST00000543555 J3QLI3 93 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms