RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 FXYD5Q96DB9 178 aa6.91□□□□□ -1.3
TNFRSF1A-214ENST00000543048 AGPAT4-IT1Q9H0P7 198 aa6.91□□□□□ -1.3
TNFRSF1A-214ENST00000543048 DNAH10Q8IVF4 4471 aa6.91□□□□□ -1.3
TNFRSF1A-214ENST00000543048 EPPK1P58107 5090 aaKnown RBP6.9□□□□□ -1.3
TNFRSF1A-214ENST00000543048 PLAC8L1A1L4L8 177 aa6.9□□□□□ -1.3
TNFRSF1A-214ENST00000543048 OR7C2O60412 319 aa6.9□□□□□ -1.3
TNFRSF1A-214ENST00000543048 SLC25A5P05141 298 aaKnown RBP6.9□□□□□ -1.3
TNFRSF1A-214ENST00000543048 OR10J4P0C629 311 aa6.9□□□□□ -1.3
TNFRSF1A-214ENST00000543048 DEFB130BP0DP73 79 aa6.9□□□□□ -1.3
TNFRSF1A-214ENST00000543048 DEFB130AP0DP74 79 aa6.9□□□□□ -1.3
TNFRSF1A-214ENST00000543048 HTN3P15516 51 aa6.9□□□□□ -1.3
TNFRSF1A-214ENST00000543048 TAS2R45P59539 299 aa6.9□□□□□ -1.3
TNFRSF1A-214ENST00000543048 GFI1BQ5VTD9 330 aa6.9□□□□□ -1.3
TNFRSF1A-214ENST00000543048 C9orf47Q6ZRZ4 202 aa6.9□□□□□ -1.3
TNFRSF1A-214ENST00000543048 SSX7Q7RTT5 188 aa6.9□□□□□ -1.3
TNFRSF1A-214ENST00000543048 SFT2D1Q8WV19 159 aa6.9□□□□□ -1.3
TNFRSF1A-214ENST00000543048 C16orf74Q96GX8 76 aa6.9□□□□□ -1.3
TNFRSF1A-214ENST00000543048 MED9Q9NWA0 146 aa6.9□□□□□ -1.3
TNFRSF1A-214ENST00000543048 TIMM8BQ9Y5J9 83 aaPredicted RBP6.9□□□□□ -1.3
TNFRSF1A-214ENST00000543048 FRAS1Q86XX4 4008 aa6.89□□□□□ -1.31
TNFRSF1A-214ENST00000543048 TRAV12-3A0A0B4J271 114 aa6.89□□□□□ -1.31
TNFRSF1A-214ENST00000543048 CBY3A6NI87 242 aa6.89□□□□□ -1.31
TNFRSF1A-214ENST00000543048 J3KRW8 73 aa6.89□□□□□ -1.31
TNFRSF1A-214ENST00000543048 STAG3L2P0CL84 134 aa6.89□□□□□ -1.31
TNFRSF1A-214ENST00000543048 STAG3L3P0CL85 134 aa6.89□□□□□ -1.31
TNFRSF1A-214ENST00000543048 P0DMU3 169 aa6.89□□□□□ -1.31
TNFRSF1A-214ENST00000543048 FAM231AP0DMU4 169 aa6.89□□□□□ -1.31
TNFRSF1A-214ENST00000543048 FAM231CP0DMU5 169 aa6.89□□□□□ -1.31
TNFRSF1A-214ENST00000543048 CSN1S1P47710 185 aa6.89□□□□□ -1.31
TNFRSF1A-214ENST00000543048 RANP62826 216 aaKnown RBP6.89□□□□□ -1.31
TNFRSF1A-214ENST00000543048 KHDC3LQ587J8 217 aa6.89□□□□□ -1.31
TNFRSF1A-214ENST00000543048 COMMD7Q86VX2 200 aa6.89□□□□□ -1.31
TNFRSF1A-214ENST00000543048 LYPD1Q8N2G4 141 aa6.89□□□□□ -1.31
TNFRSF1A-214ENST00000543048 TMEM263Q8WUH6 116 aaKnown RBP6.89□□□□□ -1.31
TNFRSF1A-214ENST00000543048 FAM19A4Q96LR4 140 aa6.89□□□□□ -1.31
TNFRSF1A-214ENST00000543048 A0A1B0GV50 99 aa6.88□□□□□ -1.31
TNFRSF1A-214ENST00000543048 HMGB3O15347 200 aaKnown RBP6.88□□□□□ -1.31
TNFRSF1A-214ENST00000543048 EIF3GO75821 320 aaKnown RBP eCLIP6.88□□□□□ -1.31
TNFRSF1A-214ENST00000543048 CXorf1O96002 111 aa6.88□□□□□ -1.31
TNFRSF1A-214ENST00000543048 GPX1P07203 203 aa6.88□□□□□ -1.31
TNFRSF1A-214ENST00000543048 ARL14EPLP0DKL9 152 aa6.88□□□□□ -1.31
TNFRSF1A-214ENST00000543048 FGF8P55075 233 aaPredicted RBP6.88□□□□□ -1.31
TNFRSF1A-214ENST00000543048 TMEM78Q5T7P6 136 aa6.88□□□□□ -1.31
TNFRSF1A-214ENST00000543048 PQLC2Q6ZP29 291 aa6.88□□□□□ -1.31
TNFRSF1A-214ENST00000543048 POM121L12Q8N7R1 296 aa6.88□□□□□ -1.31
TNFRSF1A-214ENST00000543048 RNASE8Q8TDE3 154 aaKnown RBP6.88□□□□□ -1.31
TNFRSF1A-214ENST00000543048 ZNF503Q96F45 646 aa6.88□□□□□ -1.31
TNFRSF1A-214ENST00000543048 VGLL1Q99990 258 aa6.88□□□□□ -1.31
TNFRSF1A-214ENST00000543048 PYGO2Q9BRQ0 406 aa6.88□□□□□ -1.31
TNFRSF1A-214ENST00000543048 KRTAP4-8Q9BYQ9 185 aa6.88□□□□□ -1.31
TNFRSF1A-214ENST00000543048 NOP10Q9NPE3 64 aaKnown RBP6.88□□□□□ -1.31
TNFRSF1A-214ENST00000543048 C7orf71A4D174 169 aa6.87□□□□□ -1.31
TNFRSF1A-214ENST00000543048 KLLNB2CW77 178 aa6.87□□□□□ -1.31
TNFRSF1A-214ENST00000543048 ZNF324O75467 553 aaPredicted RBP6.87□□□□□ -1.31
TNFRSF1A-214ENST00000543048 IFNA1P01562 189 aa6.87□□□□□ -1.31
TNFRSF1A-214ENST00000543048 ATP5G1P05496 136 aa6.87□□□□□ -1.31
TNFRSF1A-214ENST00000543048 CRISP2P16562 243 aa6.87□□□□□ -1.31
TNFRSF1A-214ENST00000543048 RNASE4P34096 147 aaKnown RBP6.87□□□□□ -1.31
TNFRSF1A-214ENST00000543048 ATP5G3P48201 142 aa6.87□□□□□ -1.31
TNFRSF1A-214ENST00000543048 PPT1P50897 306 aa6.87□□□□□ -1.31
TNFRSF1A-214ENST00000543048 UBE2L3P68036 154 aaKnown RBP6.87□□□□□ -1.31
TNFRSF1A-214ENST00000543048 TMEM88Q6PEY1 159 aa6.87□□□□□ -1.31
TNFRSF1A-214ENST00000543048 IQCF2Q8IXL9 164 aa6.87□□□□□ -1.31
TNFRSF1A-214ENST00000543048 RXFP4Q8TDU9 374 aa6.87□□□□□ -1.31
TNFRSF1A-214ENST00000543048 Q9H3A6 140 aa6.87□□□□□ -1.31
TNFRSF1A-214ENST00000543048 ZNF492Q9P255 531 aa6.87□□□□□ -1.31
TNFRSF1A-214ENST00000543048 MUC4Q99102 2169 aa6.86□□□□□ -1.31
TNFRSF1A-214ENST00000543048 IGKV2-40A0A087WW87 121 aaPredicted RBP6.86□□□□□ -1.31
TNFRSF1A-214ENST00000543048 TRBV7-9A0A0J9YWB2 115 aa6.86□□□□□ -1.31
TNFRSF1A-214ENST00000543048 RAB19A4D1S5 217 aa6.86□□□□□ -1.31
TNFRSF1A-214ENST00000543048 RBAKDNA6NC62 111 aa6.86□□□□□ -1.31
TNFRSF1A-214ENST00000543048 PGPA6NDG6 321 aa6.86□□□□□ -1.31
TNFRSF1A-214ENST00000543048 SNURFLB1AK76 121 aa6.86□□□□□ -1.31
TNFRSF1A-214ENST00000543048 F5H768 121 aa6.86□□□□□ -1.31
TNFRSF1A-214ENST00000543048 IGKV2D-40P01614 121 aaPredicted RBP6.86□□□□□ -1.31
TNFRSF1A-214ENST00000543048 GCHFRP30047 84 aa6.86□□□□□ -1.31
TNFRSF1A-214ENST00000543048 ZNF138P52744 262 aa6.86□□□□□ -1.31
TNFRSF1A-214ENST00000543048 CCL20P78556 96 aa6.86□□□□□ -1.31
TNFRSF1A-214ENST00000543048 C15orf53Q8NAA6 179 aa6.86□□□□□ -1.31
TNFRSF1A-214ENST00000543048 FAM210AQ96ND0 272 aa6.86□□□□□ -1.31
TNFRSF1A-214ENST00000543048 LINC00467Q9BRT7 94 aa6.86□□□□□ -1.31
TNFRSF1A-214ENST00000543048 MANBALQ9NQG1 85 aa6.86□□□□□ -1.31
TNFRSF1A-214ENST00000543048 OTORQ9NRC9 128 aa6.86□□□□□ -1.31
TNFRSF1A-214ENST00000543048 TMEM167BQ9NRX6 74 aa6.86□□□□□ -1.31
TNFRSF1A-214ENST00000543048 GNG13Q9P2W3 67 aa6.86□□□□□ -1.31
TNFRSF1A-214ENST00000543048 DIRC3C9JPN6 131 aa6.85□□□□□ -1.31
TNFRSF1A-214ENST00000543048 H3BS24 57 aa6.85□□□□□ -1.31
TNFRSF1A-214ENST00000543048 PAX4O43316 350 aa6.85□□□□□ -1.31
TNFRSF1A-214ENST00000543048 BCL2P10415 239 aa6.85□□□□□ -1.31
TNFRSF1A-214ENST00000543048 TAGLN2P37802 199 aaKnown RBP6.85□□□□□ -1.31
TNFRSF1A-214ENST00000543048 DAZ2Q13117 558 aaKnown RBP6.85□□□□□ -1.31
TNFRSF1A-214ENST00000543048 BTN1A1Q13410 526 aa6.85□□□□□ -1.31
TNFRSF1A-214ENST00000543048 ANXA2RQ3ZCQ2 193 aa6.85□□□□□ -1.31
TNFRSF1A-214ENST00000543048 RNF212Q495C1 297 aa6.85□□□□□ -1.31
TNFRSF1A-214ENST00000543048 TOR2AQ5JU69 321 aa6.85□□□□□ -1.31
TNFRSF1A-214ENST00000543048 UQCC3Q6UW78 93 aa6.85□□□□□ -1.31
TNFRSF1A-214ENST00000543048 SLC7A5P1Q8MH63 180 aa6.85□□□□□ -1.31
TNFRSF1A-214ENST00000543048 EIF4E3Q8N5X7 224 aaKnown RBP6.85□□□□□ -1.31
TNFRSF1A-214ENST00000543048 ZFAND2AQ8N6M9 145 aa6.85□□□□□ -1.31
TNFRSF1A-214ENST00000543048 ARL6IP6Q8N6S5 226 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms