RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 OR2D3Q8NGH3 330 aa8.29□□□□□ -1.08
SCG3-202ENST00000542355 TSKUQ8WUA8 353 aa8.29□□□□□ -1.08
SCG3-202ENST00000542355 NEU1Q99519 415 aa8.29□□□□□ -1.08
SCG3-202ENST00000542355 NPIPB6E9PJ23 425 aa8.28□□□□□ -1.08
SCG3-202ENST00000542355 OVOL1O14753 267 aa8.28□□□□□ -1.08
SCG3-202ENST00000542355 FRMD6-AS1P0C7T7 363 aa8.28□□□□□ -1.08
SCG3-202ENST00000542355 ZNF80P51504 273 aaPredicted RBP8.28□□□□□ -1.08
SCG3-202ENST00000542355 ZNF138P52744 262 aa8.28□□□□□ -1.08
SCG3-202ENST00000542355 RPL19P84098 196 aaKnown RBP8.28□□□□□ -1.08
SCG3-202ENST00000542355 SMUG1Q53HV7 270 aa8.28□□□□□ -1.08
SCG3-202ENST00000542355 COX8CQ7Z4L0 72 aa8.28□□□□□ -1.08
SCG3-202ENST00000542355 OR10J6PQ8NGY7 276 aa8.28□□□□□ -1.08
SCG3-202ENST00000542355 TRAV9-1A0A075B6T8 112 aa8.28□□□□□ -1.08
SCG3-202ENST00000542355 HIGD1CA8MV81 97 aa8.28□□□□□ -1.08
SCG3-202ENST00000542355 A8MWL6 223 aa8.28□□□□□ -1.08
SCG3-202ENST00000542355 SH2D1AO60880 128 aa8.28□□□□□ -1.08
SCG3-202ENST00000542355 CSN3P07498 182 aa8.28□□□□□ -1.08
SCG3-202ENST00000542355 GZMBP10144 247 aa8.28□□□□□ -1.08
SCG3-202ENST00000542355 NSUN5P1Q3KNT7 163 aa8.28□□□□□ -1.08
SCG3-202ENST00000542355 FAM162BQ5T6X4 162 aa8.28□□□□□ -1.08
SCG3-202ENST00000542355 SAMD13Q5VXD3 122 aa8.28□□□□□ -1.08
SCG3-202ENST00000542355 NUP35Q8NFH5 326 aa8.28□□□□□ -1.08
SCG3-202ENST00000542355 NAT8BQ9UHF3 227 aa8.28□□□□□ -1.08
SCG3-202ENST00000542355 FN1P02751 2386 aaKnown RBP8.27□□□□□ -1.08
SCG3-202ENST00000542355 IZUMO1RA6ND01 250 aa8.27□□□□□ -1.09
SCG3-202ENST00000542355 CYSRT1A8MQ03 144 aa8.27□□□□□ -1.09
SCG3-202ENST00000542355 K7EQG2 157 aa8.27□□□□□ -1.09
SCG3-202ENST00000542355 ZNF688P0C7X2 276 aa8.27□□□□□ -1.09
SCG3-202ENST00000542355 PAFAH1B2P68402 229 aa8.27□□□□□ -1.09
SCG3-202ENST00000542355 MRPL54Q6P161 138 aaKnown RBP8.27□□□□□ -1.09
SCG3-202ENST00000542355 OR4B1Q8NGF8 309 aa8.27□□□□□ -1.09
SCG3-202ENST00000542355 OR8A1Q8NGG7 326 aa8.27□□□□□ -1.09
SCG3-202ENST00000542355 KRTAP10-3P60369 221 aa8.27□□□□□ -1.09
SCG3-202ENST00000542355 SNRPD3P62318 126 aaKnown RBP8.27□□□□□ -1.09
SCG3-202ENST00000542355 HIST1H1AQ02539 215 aaPredicted RBP8.27□□□□□ -1.09
SCG3-202ENST00000542355 FABP9Q0Z7S8 132 aa8.27□□□□□ -1.09
SCG3-202ENST00000542355 PSMG4Q5JS54 123 aa8.27□□□□□ -1.09
SCG3-202ENST00000542355 DYNLRB2Q8TF09 96 aa8.27□□□□□ -1.09
SCG3-202ENST00000542355 GTSF1Q8WW33 167 aa8.27□□□□□ -1.09
SCG3-202ENST00000542355 LINC00477Q96M19 166 aa8.27□□□□□ -1.09
SCG3-202ENST00000542355 TRAPPC1Q9Y5R8 145 aa8.27□□□□□ -1.09
SCG3-202ENST00000542355 TMSB15BA0A087X1C1 80 aa8.26□□□□□ -1.09
SCG3-202ENST00000542355 LOC105371267A0A1B0GV96 52 aa8.26□□□□□ -1.09
SCG3-202ENST00000542355 CIDEAO60543 219 aa8.26□□□□□ -1.09
SCG3-202ENST00000542355 CDPF1Q6NVV7 123 aa8.26□□□□□ -1.09
SCG3-202ENST00000542355 FRZBQ92765 325 aa8.26□□□□□ -1.09
SCG3-202ENST00000542355 FABP5P3A8MUU1 101 aa8.25□□□□□ -1.09
SCG3-202ENST00000542355 PHOX2AO14813 284 aa8.25□□□□□ -1.09
SCG3-202ENST00000542355 TRGC1P0CF51 173 aa8.25□□□□□ -1.09
SCG3-202ENST00000542355 DEFB114Q30KQ6 69 aa8.25□□□□□ -1.09
SCG3-202ENST00000542355 PGLYRP4Q96LB8 373 aa8.25□□□□□ -1.09
SCG3-202ENST00000542355 TMEM189A5PLL7 270 aa8.25□□□□□ -1.09
SCG3-202ENST00000542355 ACTL10Q5JWF8 245 aa8.25□□□□□ -1.09
SCG3-202ENST00000542355 GDF5OSQ5U4N7 250 aa8.25□□□□□ -1.09
SCG3-202ENST00000542355 TMEM61Q8N0U2 210 aa8.25□□□□□ -1.09
SCG3-202ENST00000542355 GFRA4Q9GZZ7 299 aa8.25□□□□□ -1.09
SCG3-202ENST00000542355 HIST1H2BKO60814 126 aa8.24□□□□□ -1.09
SCG3-202ENST00000542355 ORM1P02763 201 aa8.24□□□□□ -1.09
SCG3-202ENST00000542355 HIST1H2BJP06899 126 aa8.24□□□□□ -1.09
SCG3-202ENST00000542355 HIST1H2BOP23527 126 aa8.24□□□□□ -1.09
SCG3-202ENST00000542355 HIST1H2BBP33778 126 aa8.24□□□□□ -1.09
SCG3-202ENST00000542355 HIST1H2BDP58876 126 aa8.24□□□□□ -1.09
SCG3-202ENST00000542355 HIST1H2BCP62807 126 aa8.24□□□□□ -1.09
SCG3-202ENST00000542355 HIST2H2BEQ16778 126 aa8.24□□□□□ -1.09
SCG3-202ENST00000542355 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.24□□□□□ -1.09
SCG3-202ENST00000542355 HIST1H2BHQ93079 126 aa8.24□□□□□ -1.09
SCG3-202ENST00000542355 HIST1H2BNQ99877 126 aa8.24□□□□□ -1.09
SCG3-202ENST00000542355 HIST1H2BMQ99879 126 aa8.24□□□□□ -1.09
SCG3-202ENST00000542355 LENEPQ9Y5L5 61 aa8.24□□□□□ -1.09
SCG3-202ENST00000542355 FAM231BA6NCW3 169 aa8.24□□□□□ -1.09
SCG3-202ENST00000542355 SNURFLB1AK76 121 aa8.24□□□□□ -1.09
SCG3-202ENST00000542355 RAB4BP61018 213 aa8.24□□□□□ -1.09
SCG3-202ENST00000542355 SNRPEP62304 92 aaKnown RBP8.24□□□□□ -1.09
SCG3-202ENST00000542355 CD300EQ496F6 205 aaPredicted RBP8.24□□□□□ -1.09
SCG3-202ENST00000542355 VCX2Q9H322 139 aa8.24□□□□□ -1.09
SCG3-202ENST00000542355 NSD1Q96L73 2696 aaPredicted RBP8.23□□□□□ -1.09
SCG3-202ENST00000542355 A0A1B0GUS0 222 aa8.23□□□□□ -1.09
SCG3-202ENST00000542355 FOXA3P55318 350 aaPredicted RBP8.23□□□□□ -1.09
SCG3-202ENST00000542355 PRR9Q5T870 116 aa8.23□□□□□ -1.09
SCG3-202ENST00000542355 Q6ZQT7 251 aa8.23□□□□□ -1.09
SCG3-202ENST00000542355 IGKV3-20P01619 116 aa8.22□□□□□ -1.09
SCG3-202ENST00000542355 NDUFA6P56556 154 aa8.22□□□□□ -1.09
SCG3-202ENST00000542355 NDUFA11Q86Y39 141 aa8.22□□□□□ -1.09
SCG3-202ENST00000542355 ZFAND2AQ8N6M9 145 aa8.22□□□□□ -1.09
SCG3-202ENST00000542355 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.22□□□□□ -1.09
SCG3-202ENST00000542355 GNB1LQ9BYB4 327 aa8.22□□□□□ -1.09
SCG3-202ENST00000542355 MRPL18Q9H0U6 180 aaKnown RBP8.22□□□□□ -1.09
SCG3-202ENST00000542355 C5orf52A6NGY3 159 aa8.22□□□□□ -1.09
SCG3-202ENST00000542355 GPX1P07203 203 aa8.22□□□□□ -1.09
SCG3-202ENST00000542355 SSTP61278 116 aa8.22□□□□□ -1.09
SCG3-202ENST00000542355 KIR3DS1Q14943 382 aa8.22□□□□□ -1.09
SCG3-202ENST00000542355 EBLN2Q6P2I7 272 aa8.22□□□□□ -1.09
SCG3-202ENST00000542355 TMEM136Q6ZRR5 245 aa8.22□□□□□ -1.09
SCG3-202ENST00000542355 ZNF575Q86XF7 245 aa8.22□□□□□ -1.09
SCG3-202ENST00000542355 FAM19A4Q96LR4 140 aa8.22□□□□□ -1.09
SCG3-202ENST00000542355 SAV1Q9H4B6 383 aaPredicted RBP8.22□□□□□ -1.09
SCG3-202ENST00000542355 SETD2Q9BYW2 2564 aaPredicted RBP8.21□□□□□ -1.09
SCG3-202ENST00000542355 A0A0J9YX75 114 aa8.21□□□□□ -1.09
SCG3-202ENST00000542355 GRIFINA4D1Z8 144 aa8.21□□□□□ -1.09
SCG3-202ENST00000542355 H0Y8G0 127 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms