RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 SIGLEC9Q9Y336 463 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 INSIG2Q9Y5U4 225 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 PRSS47A8MTI9 375 aa8.15□□□□□ -1.1
CHFR-219ENST00000541341 ENSAO43768 121 aaKnown RBP8.15□□□□□ -1.1
CHFR-219ENST00000541341 DPM2O94777 84 aa8.15□□□□□ -1.1
CHFR-219ENST00000541341 IGLV2-11P01706 119 aa8.15□□□□□ -1.1
CHFR-219ENST00000541341 CRYGBP07316 175 aa8.15□□□□□ -1.1
CHFR-219ENST00000541341 ARMS2P0C7Q2 107 aa8.15□□□□□ -1.1
CHFR-219ENST00000541341 PLNP26678 52 aa8.15□□□□□ -1.1
CHFR-219ENST00000541341 CD300EQ496F6 205 aaPredicted RBP8.15□□□□□ -1.1
CHFR-219ENST00000541341 FAM216BQ8N7L0 139 aa8.15□□□□□ -1.1
CHFR-219ENST00000541341 ZNF502Q8TBZ5 544 aa8.15□□□□□ -1.1
CHFR-219ENST00000541341 VGLL1Q99990 258 aa8.15□□□□□ -1.1
CHFR-219ENST00000541341 CNFNQ9BYD5 112 aa8.15□□□□□ -1.1
CHFR-219ENST00000541341 HIF1ANQ9NWT6 349 aa8.15□□□□□ -1.1
CHFR-219ENST00000541341 RBAKDNA6NC62 111 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 CGB1A6NKQ9 187 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 D6R8Y8 96 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 H0Y8G0 127 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 TMEM178BH3BS89 294 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 PPP1R17O96001 155 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 IGKCP01834 107 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 IFI27P40305 119 aaPredicted RBP8.14□□□□□ -1.11
CHFR-219ENST00000541341 MFAP4P55083 255 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 TCTAP57738 103 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 CACNG7P62955 275 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 HOXA4Q00056 320 aaPredicted RBP8.14□□□□□ -1.11
CHFR-219ENST00000541341 TMEM155Q4W5P6 130 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 ZNF562Q6V9R5 426 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 LINC00322Q6ZN03 302 aaPredicted RBP8.14□□□□□ -1.11
CHFR-219ENST00000541341 LINC00173Q6ZV60 143 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 Q6ZVH6 145 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 LINC01356Q8N9X3 169 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 DEFB108BQ8NET1 73 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 MYOZ3Q8TDC0 251 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 RNF125Q96EQ8 232 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 ZC2HC1AQ96GY0 325 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 ASCL2Q99929 193 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 ZMAT4Q9H898 229 aa8.14□□□□□ -1.11
CHFR-219ENST00000541341 WI2-2373I1.2A0A1W2PRP0 233 aa8.13□□□□□ -1.11
CHFR-219ENST00000541341 NCBP2LA6PVI3 153 aaKnown RBP8.13□□□□□ -1.11
CHFR-219ENST00000541341 FABP5P3A8MUU1 101 aa8.13□□□□□ -1.11
CHFR-219ENST00000541341 IGHV1-8P0DP01 117 aa8.13□□□□□ -1.11
CHFR-219ENST00000541341 TMEM11P17152 192 aa8.13□□□□□ -1.11
CHFR-219ENST00000541341 COL8A2P25067 703 aa8.13□□□□□ -1.11
CHFR-219ENST00000541341 KLF17Q5JT82 389 aaPredicted RBP8.13□□□□□ -1.11
CHFR-219ENST00000541341 SIGLEC15Q6ZMC9 328 aa8.13□□□□□ -1.11
CHFR-219ENST00000541341 TTC9CQ8N5M4 171 aa8.13□□□□□ -1.11
CHFR-219ENST00000541341 ATP6V0E2Q8NHE4 81 aa8.13□□□□□ -1.11
CHFR-219ENST00000541341 I3L2K1 104 aa8.12□□□□□ -1.11
CHFR-219ENST00000541341 CLEC3BP05452 202 aa8.12□□□□□ -1.11
CHFR-219ENST00000541341 PRSS1P07477 247 aa8.12□□□□□ -1.11
CHFR-219ENST00000541341 NMUP48645 174 aa8.12□□□□□ -1.11
CHFR-219ENST00000541341 LYZL1Q6UWQ5 148 aa8.12□□□□□ -1.11
CHFR-219ENST00000541341 FOXI2Q6ZQN5 318 aa8.12□□□□□ -1.11
CHFR-219ENST00000541341 ZNF785A8K8V0 405 aa8.11□□□□□ -1.11
CHFR-219ENST00000541341 OOSP1A8MZH6 123 aa8.11□□□□□ -1.11
CHFR-219ENST00000541341 TNFRSF13BO14836 293 aaPredicted RBP8.11□□□□□ -1.11
CHFR-219ENST00000541341 GNG7O60262 68 aa8.11□□□□□ -1.11
CHFR-219ENST00000541341 SSBP2P81877 361 aaPredicted RBP8.11□□□□□ -1.11
CHFR-219ENST00000541341 RPL24P83731 157 aaKnown RBP8.11□□□□□ -1.11
CHFR-219ENST00000541341 MRPL51Q4U2R6 128 aaKnown RBP8.11□□□□□ -1.11
CHFR-219ENST00000541341 PAPPA-AS1Q5QFB9 102 aa8.11□□□□□ -1.11
CHFR-219ENST00000541341 HCP5Q6MZN7 132 aa8.11□□□□□ -1.11
CHFR-219ENST00000541341 CEND1Q8N111 149 aa8.11□□□□□ -1.11
CHFR-219ENST00000541341 Q8N8P6 123 aa8.11□□□□□ -1.11
CHFR-219ENST00000541341 CCL17Q92583 94 aa8.11□□□□□ -1.11
CHFR-219ENST00000541341 RPEQ96AT9 228 aa8.11□□□□□ -1.11
CHFR-219ENST00000541341 RITA1Q96K30 269 aa8.11□□□□□ -1.11
CHFR-219ENST00000541341 CHAC1Q9BUX1 264 aa8.11□□□□□ -1.11
CHFR-219ENST00000541341 TRAV12-1A0A0B4J245 112 aa8.1□□□□□ -1.11
CHFR-219ENST00000541341 IGHV1-3A0A0C4DH29 117 aa8.1□□□□□ -1.11
CHFR-219ENST00000541341 NPIPB5A8MRT5 1133 aa8.1□□□□□ -1.11
CHFR-219ENST00000541341 CNIH1O95406 144 aa8.1□□□□□ -1.11
CHFR-219ENST00000541341 FCGR2BP31994 310 aaPredicted RBP8.1□□□□□ -1.11
CHFR-219ENST00000541341 DLX6P56179 175 aa8.1□□□□□ -1.11
CHFR-219ENST00000541341 TCTEX1D4Q5JR98 221 aa8.1□□□□□ -1.11
CHFR-219ENST00000541341 CCDC144NLQ6NUI1 221 aa8.1□□□□□ -1.11
CHFR-219ENST00000541341 AMN1Q8IY45 258 aa8.1□□□□□ -1.11
CHFR-219ENST00000541341 C3orf56Q8N813 242 aa8.1□□□□□ -1.11
CHFR-219ENST00000541341 MRPL53Q96EL3 112 aaKnown RBP8.1□□□□□ -1.11
CHFR-219ENST00000541341 SPATA25Q9BR10 227 aa8.1□□□□□ -1.11
CHFR-219ENST00000541341 SLC50A1Q9BRV3 221 aa8.1□□□□□ -1.11
CHFR-219ENST00000541341 TIMM8BQ9Y5J9 83 aaPredicted RBP8.1□□□□□ -1.11
CHFR-219ENST00000541341 WNK2Q9Y3S1 2297 aa8.1□□□□□ -1.11
CHFR-219ENST00000541341 TEX22C9J3V5 150 aa8.09□□□□□ -1.11
CHFR-219ENST00000541341 E7EUB6 86 aa8.09□□□□□ -1.11
CHFR-219ENST00000541341 E9PLD3 99 aa8.09□□□□□ -1.11
CHFR-219ENST00000541341 BUB1B-PAK6H3BSN5 160 aa8.09□□□□□ -1.11
CHFR-219ENST00000541341 SH2D1AO60880 128 aa8.09□□□□□ -1.11
CHFR-219ENST00000541341 AVPP01185 164 aa8.09□□□□□ -1.11
CHFR-219ENST00000541341 IGLC6P0CF74 106 aa8.09□□□□□ -1.11
CHFR-219ENST00000541341 GCSHP23434 173 aa8.09□□□□□ -1.11
CHFR-219ENST00000541341 ZNF138P52744 262 aa8.09□□□□□ -1.11
CHFR-219ENST00000541341 PAX8Q06710 450 aa8.09□□□□□ -1.11
CHFR-219ENST00000541341 ORMDL2Q53FV1 153 aa8.09□□□□□ -1.11
CHFR-219ENST00000541341 EXOC3-AS1Q8N2X6 119 aa8.09□□□□□ -1.11
CHFR-219ENST00000541341 ZNF491Q8N8L2 437 aa8.09□□□□□ -1.11
CHFR-219ENST00000541341 MRAP2Q96G30 205 aa8.09□□□□□ -1.11
CHFR-219ENST00000541341 PRR25Q96S07 402 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 1154.2 ms