RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 ZNF502Q8TBZ5 544 aa11.8□□□□□ -0.52
CLPTM1-202ENST00000541297 SLC25A39Q9BZJ4 359 aaPredicted RBP11.8□□□□□ -0.52
CLPTM1-202ENST00000541297 MS4A6AQ9H2W1 248 aa11.8□□□□□ -0.52
CLPTM1-202ENST00000541297 HSPB8Q9UJY1 196 aa11.8□□□□□ -0.52
CLPTM1-202ENST00000541297 Q6YL49 198 aa11.8□□□□□ -0.52
CLPTM1-202ENST00000541297 C9orf139Q6ZV77 190 aa11.8□□□□□ -0.52
CLPTM1-202ENST00000541297 NPIPB6E9PJ23 425 aa11.8□□□□□ -0.52
CLPTM1-202ENST00000541297 HAX1O00165 279 aa11.8□□□□□ -0.52
CLPTM1-202ENST00000541297 TRGV3P03979 118 aa11.8□□□□□ -0.52
CLPTM1-202ENST00000541297 LCNL1Q6ZST4 164 aa11.8□□□□□ -0.52
CLPTM1-202ENST00000541297 PRNTQ86SH4 94 aa11.8□□□□□ -0.52
CLPTM1-202ENST00000541297 Q86TA4 180 aa11.8□□□□□ -0.52
CLPTM1-202ENST00000541297 CCDC140Q96MF4 163 aa11.8□□□□□ -0.52
CLPTM1-202ENST00000541297 FAM231BA6NCW3 169 aa11.79□□□□□ -0.52
CLPTM1-202ENST00000541297 CIDEAO60543 219 aa11.79□□□□□ -0.52
CLPTM1-202ENST00000541297 PRB4P10163 310 aaPredicted RBP11.79□□□□□ -0.52
CLPTM1-202ENST00000541297 CRIP2P52943 208 aaPredicted RBP11.79□□□□□ -0.52
CLPTM1-202ENST00000541297 LINC01545Q5VT33 79 aa11.79□□□□□ -0.52
CLPTM1-202ENST00000541297 GAGE12BA1L429 117 aa11.79□□□□□ -0.52
CLPTM1-202ENST00000541297 C2orf91Q6ZV80 131 aa11.79□□□□□ -0.52
CLPTM1-202ENST00000541297 EXOC3-AS1Q8N2X6 119 aa11.79□□□□□ -0.52
CLPTM1-202ENST00000541297 CSTL1Q9H114 145 aa11.79□□□□□ -0.52
CLPTM1-202ENST00000541297 VPREB3Q9UKI3 123 aa11.79□□□□□ -0.52
CLPTM1-202ENST00000541297 NCR2O95944 276 aa11.78□□□□□ -0.52
CLPTM1-202ENST00000541297 PPIFP30405 207 aaKnown RBP11.78□□□□□ -0.52
CLPTM1-202ENST00000541297 FCGR2BP31994 310 aaPredicted RBP11.78□□□□□ -0.52
CLPTM1-202ENST00000541297 S100A7AQ86SG5 101 aa11.78□□□□□ -0.52
CLPTM1-202ENST00000541297 CLUHP3Q96NS8 147 aa11.78□□□□□ -0.52
CLPTM1-202ENST00000541297 ASCL2Q99929 193 aa11.78□□□□□ -0.52
CLPTM1-202ENST00000541297 WI2-2373I1.2A0A1W2PRP0 233 aa11.78□□□□□ -0.52
CLPTM1-202ENST00000541297 COX8AP10176 69 aa11.78□□□□□ -0.52
CLPTM1-202ENST00000541297 ATP5G2Q06055 141 aa11.78□□□□□ -0.52
CLPTM1-202ENST00000541297 GOLT1AQ6ZVE7 132 aa11.78□□□□□ -0.52
CLPTM1-202ENST00000541297 EEF1AKMT3Q96AZ1 226 aa11.78□□□□□ -0.52
CLPTM1-202ENST00000541297 KLK15Q9H2R5 256 aa11.78□□□□□ -0.52
CLPTM1-202ENST00000541297 IGLV2-11P01706 119 aa11.77□□□□□ -0.52
CLPTM1-202ENST00000541297 ARMS2P0C7Q2 107 aa11.77□□□□□ -0.52
CLPTM1-202ENST00000541297 KLK9Q2XQG4 91 aa11.77□□□□□ -0.52
CLPTM1-202ENST00000541297 ZNF747Q9BV97 191 aa11.77□□□□□ -0.52
CLPTM1-202ENST00000541297 AP5S1Q9NUS5 200 aa11.77□□□□□ -0.52
CLPTM1-202ENST00000541297 KLK9Q9UKQ9 250 aa11.77□□□□□ -0.52
CLPTM1-202ENST00000541297 NF1P21359 2839 aa11.77□□□□□ -0.53
CLPTM1-202ENST00000541297 C7orf71A4D174 169 aa11.77□□□□□ -0.53
CLPTM1-202ENST00000541297 ZNF785A8K8V0 405 aa11.77□□□□□ -0.53
CLPTM1-202ENST00000541297 PF4V1P10720 104 aa11.77□□□□□ -0.53
CLPTM1-202ENST00000541297 PEF1Q9UBV8 284 aaKnown RBP11.77□□□□□ -0.53
CLPTM1-202ENST00000541297 BPIFA4PQ86YQ2 179 aa11.76□□□□□ -0.53
CLPTM1-202ENST00000541297 A0A1B0GUT8 65 aa11.76□□□□□ -0.53
CLPTM1-202ENST00000541297 SCGB2A1O75556 95 aa11.76□□□□□ -0.53
CLPTM1-202ENST00000541297 KRTAP1-1Q07627 177 aa11.76□□□□□ -0.53
CLPTM1-202ENST00000541297 OTOGQ6ZRI0 2925 aa11.76□□□□□ -0.53
CLPTM1-202ENST00000541297 H3BRN7 92 aa11.75□□□□□ -0.53
CLPTM1-202ENST00000541297 IGHV3-11P01762 117 aa11.75□□□□□ -0.53
CLPTM1-202ENST00000541297 FAM106AQ4KMX7 169 aa11.75□□□□□ -0.53
CLPTM1-202ENST00000541297 SHANK2-AS3Q9BTD1 123 aa11.75□□□□□ -0.53
CLPTM1-202ENST00000541297 OTORQ9NRC9 128 aa11.75□□□□□ -0.53
CLPTM1-202ENST00000541297 TRBV7-1A0A0A6YYK4 115 aa11.75□□□□□ -0.53
CLPTM1-202ENST00000541297 TMEM238LA0A1B0GVL6 79 aa11.75□□□□□ -0.53
CLPTM1-202ENST00000541297 C10orf99Q6UWK7 81 aa11.75□□□□□ -0.53
CLPTM1-202ENST00000541297 PRSS3P2Q8NHM4 247 aa11.75□□□□□ -0.53
CLPTM1-202ENST00000541297 ZNF414Q96IQ9 312 aa11.75□□□□□ -0.53
CLPTM1-202ENST00000541297 ANK3Q12955 4377 aaKnown RBP11.75□□□□□ -0.53
CLPTM1-202ENST00000541297 FAM223BA6NKX1 122 aa11.74□□□□□ -0.53
CLPTM1-202ENST00000541297 RIPPLY3P57055 190 aa11.74□□□□□ -0.53
CLPTM1-202ENST00000541297 TMEM97Q5BJF2 176 aa11.74□□□□□ -0.53
CLPTM1-202ENST00000541297 FAM223AQ8IWN6 122 aa11.74□□□□□ -0.53
CLPTM1-202ENST00000541297 YAE1D1Q9NRH1 226 aa11.74□□□□□ -0.53
CLPTM1-202ENST00000541297 SELENOKQ9Y6D0 94 aa11.74□□□□□ -0.53
CLPTM1-202ENST00000541297 TRBV12-3P01733 135 aa11.74□□□□□ -0.53
CLPTM1-202ENST00000541297 FA2HQ7L5A8 372 aa11.74□□□□□ -0.53
CLPTM1-202ENST00000541297 TPPP3Q9BW30 176 aa11.74□□□□□ -0.53
CLPTM1-202ENST00000541297 MTORP42345 2549 aa11.74□□□□□ -0.53
CLPTM1-202ENST00000541297 CSN1S1P47710 185 aa11.73□□□□□ -0.53
CLPTM1-202ENST00000541297 TCTAP57738 103 aa11.73□□□□□ -0.53
CLPTM1-202ENST00000541297 RIGQ13278 110 aa11.73□□□□□ -0.53
CLPTM1-202ENST00000541297 OR8A1Q8NGG7 326 aa11.73□□□□□ -0.53
CLPTM1-202ENST00000541297 OR10AG1Q8NH19 301 aa11.73□□□□□ -0.53
CLPTM1-202ENST00000541297 C17orf77Q96MU5 243 aa11.73□□□□□ -0.53
CLPTM1-202ENST00000541297 GAGE10A6NGK3 116 aa11.73□□□□□ -0.53
CLPTM1-202ENST00000541297 K7ERU9 68 aa11.73□□□□□ -0.53
CLPTM1-202ENST00000541297 IFI27P40305 119 aaPredicted RBP11.73□□□□□ -0.53
CLPTM1-202ENST00000541297 CFHR3Q02985 330 aa11.73□□□□□ -0.53
CLPTM1-202ENST00000541297 RABAC1Q9UI14 185 aa11.73□□□□□ -0.53
CLPTM1-202ENST00000541297 SAP30O75446 220 aa11.72□□□□□ -0.53
CLPTM1-202ENST00000541297 IGLV1-40P01703 118 aa11.72□□□□□ -0.53
CLPTM1-202ENST00000541297 FGF6P10767 208 aa11.72□□□□□ -0.53
CLPTM1-202ENST00000541297 SMR3AQ99954 134 aa11.72□□□□□ -0.53
CLPTM1-202ENST00000541297 ZFAND3Q9H8U3 227 aa11.72□□□□□ -0.53
CLPTM1-202ENST00000541297 LOC389332A0A1B0GUA5 103 aa11.72□□□□□ -0.53
CLPTM1-202ENST00000541297 ZNF207O43670 478 aaKnown RBP11.72□□□□□ -0.53
CLPTM1-202ENST00000541297 RAB9AP51151 201 aa11.72□□□□□ -0.53
CLPTM1-202ENST00000541297 SEC11AP67812 179 aa11.72□□□□□ -0.53
CLPTM1-202ENST00000541297 IGHV3OR16-13A0A075B7E8 117 aa11.71□□□□□ -0.53
CLPTM1-202ENST00000541297 A0A096LNJ9 63 aa11.71□□□□□ -0.53
CLPTM1-202ENST00000541297 IGHV3-74A0A0B4J1X5 117 aa11.71□□□□□ -0.53
CLPTM1-202ENST00000541297 IGHV3-66A0A0C4DH42 116 aa11.71□□□□□ -0.53
CLPTM1-202ENST00000541297 TMEM14CQ9P0S9 112 aa11.71□□□□□ -0.53
CLPTM1-202ENST00000541297 H3BUA1 57 aa11.71□□□□□ -0.54
CLPTM1-202ENST00000541297 ARL3P36405 182 aa11.71□□□□□ -0.54
CLPTM1-202ENST00000541297 CRIP1P50238 77 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms