RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 BAGE2Q86Y30 109 aa17.68■□□□□ 0.42
HMGA2-208ENST00000537429 ZNF674Q2M3X9 581 aa17.67■□□□□ 0.42
HMGA2-208ENST00000537429 CENPWQ5EE01 88 aa17.67■□□□□ 0.42
HMGA2-208ENST00000537429 SBSPONQ8IVN8 264 aa17.67■□□□□ 0.42
HMGA2-208ENST00000537429 TMEM183AQ8IXX5 376 aa17.67■□□□□ 0.42
HMGA2-208ENST00000537429 MLST8Q9BVC4 326 aa17.67■□□□□ 0.42
HMGA2-208ENST00000537429 BTN1A1Q13410 526 aa17.67■□□□□ 0.42
HMGA2-208ENST00000537429 Q6ZWC4 215 aa17.67■□□□□ 0.42
HMGA2-208ENST00000537429 C7orf71A4D174 169 aa17.66■□□□□ 0.42
HMGA2-208ENST00000537429 GNG4P50150 75 aa17.66■□□□□ 0.42
HMGA2-208ENST00000537429 SMUG1Q53HV7 270 aa17.66■□□□□ 0.42
HMGA2-208ENST00000537429 C9JCJ5 164 aa17.65■□□□□ 0.42
HMGA2-208ENST00000537429 INSP01308 110 aa17.65■□□□□ 0.42
HMGA2-208ENST00000537429 RBMY1A1P0DJD3 496 aaKnown RBP17.65■□□□□ 0.42
HMGA2-208ENST00000537429 RBMY1CP0DJD4 496 aa17.65■□□□□ 0.42
HMGA2-208ENST00000537429 RNASE4P34096 147 aaKnown RBP17.65■□□□□ 0.42
HMGA2-208ENST00000537429 RBMY1FQ15415 496 aaKnown RBP17.65■□□□□ 0.42
HMGA2-208ENST00000537429 DEFB135Q30KP9 77 aa17.65■□□□□ 0.42
HMGA2-208ENST00000537429 NHLRC2Q8NBF2 726 aa17.65■□□□□ 0.42
HMGA2-208ENST00000537429 TRAV12-3A0A0B4J271 114 aa17.64■□□□□ 0.41
HMGA2-208ENST00000537429 ZNF324O75467 553 aaPredicted RBP17.64■□□□□ 0.41
HMGA2-208ENST00000537429 IGLV2-8P01709 118 aa17.64■□□□□ 0.41
HMGA2-208ENST00000537429 ZNF80P51504 273 aaPredicted RBP17.64■□□□□ 0.41
HMGA2-208ENST00000537429 C1orf158Q8N1D5 194 aa17.64■□□□□ 0.41
HMGA2-208ENST00000537429 SMIM12Q96EX1 92 aa17.64■□□□□ 0.41
HMGA2-208ENST00000537429 B9D2Q9BPU9 175 aa17.64■□□□□ 0.41
HMGA2-208ENST00000537429 SMIM7Q9BQ49 75 aa17.64■□□□□ 0.41
HMGA2-208ENST00000537429 C20orf144Q9BQM9 153 aa17.64■□□□□ 0.41
HMGA2-208ENST00000537429 ZNF727A8MUV8 499 aa17.63■□□□□ 0.41
HMGA2-208ENST00000537429 GCGP01275 180 aa17.63■□□□□ 0.41
HMGA2-208ENST00000537429 Q6AWC8 147 aa17.63■□□□□ 0.41
HMGA2-208ENST00000537429 ZC2HC1AQ96GY0 325 aa17.63■□□□□ 0.41
HMGA2-208ENST00000537429 PGPEP1LA6NFU8 196 aa17.62■□□□□ 0.41
HMGA2-208ENST00000537429 FAM74A3Q4VXF1 159 aa17.62■□□□□ 0.41
HMGA2-208ENST00000537429 SOHLH1Q5JUK2 328 aa17.62■□□□□ 0.41
HMGA2-208ENST00000537429 RCHY1Q96PM5 261 aa17.62■□□□□ 0.41
HMGA2-208ENST00000537429 SFTA3P0C7M3 94 aa17.62■□□□□ 0.41
HMGA2-208ENST00000537429 Q6ZQT7 251 aa17.62■□□□□ 0.41
HMGA2-208ENST00000537429 RNF183Q96D59 192 aa17.62■□□□□ 0.41
HMGA2-208ENST00000537429 FBN3Q75N90 2809 aa17.61■□□□□ 0.41
HMGA2-208ENST00000537429 IGHV3OR16-12A0A075B7B8 117 aa17.61■□□□□ 0.41
HMGA2-208ENST00000537429 CRIP1P50238 77 aa17.61■□□□□ 0.41
HMGA2-208ENST00000537429 ZNF705AQ6ZN79 300 aaPredicted RBP17.61■□□□□ 0.41
HMGA2-208ENST00000537429 TM2D3Q9BRN9 247 aa17.61■□□□□ 0.41
HMGA2-208ENST00000537429 NIPSNAP3BQ9BS92 247 aa17.61■□□□□ 0.41
HMGA2-208ENST00000537429 TMEM208Q9BTX3 173 aa17.61■□□□□ 0.41
HMGA2-208ENST00000537429 TP53TG1Q9Y2A0 90 aa17.61■□□□□ 0.41
HMGA2-208ENST00000537429 PRKDCP78527 4128 aaKnown RBP17.6■□□□□ 0.41
HMGA2-208ENST00000537429 OCC1Q8TAD7 63 aa17.6■□□□□ 0.41
HMGA2-208ENST00000537429 RETNQ9HD89 108 aa17.6■□□□□ 0.41
HMGA2-208ENST00000537429 GOLT1BQ9Y3E0 138 aa17.6■□□□□ 0.41
HMGA2-208ENST00000537429 TRAV21A0A0B4J279 112 aa17.59■□□□□ 0.41
HMGA2-208ENST00000537429 SPRY2O43597 315 aa17.59■□□□□ 0.41
HMGA2-208ENST00000537429 PFN1P07737 140 aaKnown RBP17.59■□□□□ 0.41
HMGA2-208ENST00000537429 TMEM256Q8N2U0 113 aa17.59■□□□□ 0.41
HMGA2-208ENST00000537429 LY96Q9Y6Y9 160 aa17.59■□□□□ 0.41
HMGA2-208ENST00000537429 NBEAL2Q6ZNJ1 2754 aa17.59■□□□□ 0.41
HMGA2-208ENST00000537429 TMEM218A2RU14 115 aa17.58■□□□□ 0.41
HMGA2-208ENST00000537429 FABP5P3A8MUU1 101 aa17.58■□□□□ 0.41
HMGA2-208ENST00000537429 SPATA25Q9BR10 227 aa17.58■□□□□ 0.41
HMGA2-208ENST00000537429 OVOL2Q9BRP0 275 aa17.58■□□□□ 0.41
HMGA2-208ENST00000537429 ZMAT4Q9H898 229 aa17.58■□□□□ 0.41
HMGA2-208ENST00000537429 DNAH9Q9NYC9 4486 aa17.58■□□□□ 0.4
HMGA2-208ENST00000537429 H7BYZ3 331 aa17.57■□□□□ 0.4
HMGA2-208ENST00000537429 MGST1P10620 155 aaKnown RBP17.57■□□□□ 0.4
HMGA2-208ENST00000537429 LINC01587Q99440 93 aa17.57■□□□□ 0.4
HMGA2-208ENST00000537429 TMEM241Q24JQ0 296 aa17.57■□□□□ 0.4
HMGA2-208ENST00000537429 FAM162BQ5T6X4 162 aa17.57■□□□□ 0.4
HMGA2-208ENST00000537429 K7EN84 100 aa17.56■□□□□ 0.4
HMGA2-208ENST00000537429 SH2D1AO60880 128 aa17.56■□□□□ 0.4
HMGA2-208ENST00000537429 LINC01551Q86U37 167 aa17.56■□□□□ 0.4
HMGA2-208ENST00000537429 PYGO2Q9BRQ0 406 aa17.56■□□□□ 0.4
HMGA2-208ENST00000537429 NAT8Q9UHE5 227 aa17.56■□□□□ 0.4
HMGA2-208ENST00000537429 PRR27Q6MZM9 219 aa17.55■□□□□ 0.4
HMGA2-208ENST00000537429 OR11H2Q8NH07 326 aa17.55■□□□□ 0.4
HMGA2-208ENST00000537429 C11orf21Q9P2W6 132 aa17.55■□□□□ 0.4
HMGA2-208ENST00000537429 X6R8D5 127 aa17.55■□□□□ 0.4
HMGA2-208ENST00000537429 HTN1P15515 57 aa17.54■□□□□ 0.4
HMGA2-208ENST00000537429 OR5I1Q13606 314 aa17.54■□□□□ 0.4
HMGA2-208ENST00000537429 NEU1Q99519 415 aa17.54■□□□□ 0.4
HMGA2-208ENST00000537429 LINC00467Q9BRT7 94 aa17.54■□□□□ 0.4
HMGA2-208ENST00000537429 BIN3Q9NQY0 253 aa17.54■□□□□ 0.4
HMGA2-208ENST00000537429 ADCYAP1P18509 176 aa17.53■□□□□ 0.4
HMGA2-208ENST00000537429 NDUFA5Q16718 116 aa17.53■□□□□ 0.4
HMGA2-208ENST00000537429 MUC21Q5SSG8 566 aa17.53■□□□□ 0.4
HMGA2-208ENST00000537429 SLC7A5P1Q8MH63 180 aa17.53■□□□□ 0.4
HMGA2-208ENST00000537429 SDF2L1Q9HCN8 221 aa17.53■□□□□ 0.4
HMGA2-208ENST00000537429 HUWE1Q7Z6Z7 4374 aaKnown RBP17.53■□□□□ 0.4
HMGA2-208ENST00000537429 IGHV1OR15-1A0A075B7D0 117 aa17.52■□□□□ 0.4
HMGA2-208ENST00000537429 PRM2P04554 102 aa17.52■□□□□ 0.4
HMGA2-208ENST00000537429 NHLRC4P0CG21 123 aaPredicted RBP17.52■□□□□ 0.4
HMGA2-208ENST00000537429 RPL23P62829 140 aaKnown RBP17.52■□□□□ 0.4
HMGA2-208ENST00000537429 TDRG1Q3Y452 100 aa17.52■□□□□ 0.4
HMGA2-208ENST00000537429 C19orf71A6NCJ1 209 aa17.52■□□□□ 0.39
HMGA2-208ENST00000537429 FAM159AQ6UWV7 190 aa17.52■□□□□ 0.39
HMGA2-208ENST00000537429 NAGKQ9UJ70 344 aa17.52■□□□□ 0.39
HMGA2-208ENST00000537429 SMIM9A6NGZ8 99 aa17.51■□□□□ 0.39
HMGA2-208ENST00000537429 ZNF705GA8MUZ8 300 aaPredicted RBP17.51■□□□□ 0.39
HMGA2-208ENST00000537429 F8W036 122 aa17.51■□□□□ 0.39
HMGA2-208ENST00000537429 ANXA2RQ3ZCQ2 193 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms