RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 VGLL1Q99990 258 aa13.52□□□□□ -0.25
TNFRSF1B-204ENST00000536782 WDR61Q9GZS3 305 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1B-204ENST00000536782 TP53TG3Q9ULZ0 132 aa13.52□□□□□ -0.25
TNFRSF1B-204ENST00000536782 ICOSQ9Y6W8 199 aa13.52□□□□□ -0.25
TNFRSF1B-204ENST00000536782 IGHV1OR15-1A0A075B7D0 117 aa13.51□□□□□ -0.25
TNFRSF1B-204ENST00000536782 PAX4O43316 350 aa13.51□□□□□ -0.25
TNFRSF1B-204ENST00000536782 RPL12P30050 165 aaKnown RBP13.51□□□□□ -0.25
TNFRSF1B-204ENST00000536782 PRR9Q5T870 116 aa13.51□□□□□ -0.25
TNFRSF1B-204ENST00000536782 ARPC5LQ9BPX5 153 aa13.51□□□□□ -0.25
TNFRSF1B-204ENST00000536782 MED28Q9H204 178 aa13.51□□□□□ -0.25
TNFRSF1B-204ENST00000536782 OR51M1Q9H341 326 aa13.51□□□□□ -0.25
TNFRSF1B-204ENST00000536782 ZNF492Q9P255 531 aa13.51□□□□□ -0.25
TNFRSF1B-204ENST00000536782 IGHV3-53P01767 116 aa13.5□□□□□ -0.25
TNFRSF1B-204ENST00000536782 RGS21Q2M5E4 152 aa13.5□□□□□ -0.25
TNFRSF1B-204ENST00000536782 ASB13Q8WXK3 278 aa13.5□□□□□ -0.25
TNFRSF1B-204ENST00000536782 MRPL16Q9NX20 251 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1B-204ENST00000536782 PRO0255Q9UI72 69 aa13.5□□□□□ -0.25
TNFRSF1B-204ENST00000536782 C17orf112F2Z3M2 114 aa13.49□□□□□ -0.25
TNFRSF1B-204ENST00000536782 SLAQ13239 276 aa13.49□□□□□ -0.25
TNFRSF1B-204ENST00000536782 Q6ZQT7 251 aa13.49□□□□□ -0.25
TNFRSF1B-204ENST00000536782 PAXXQ9BUH6 204 aa13.49□□□□□ -0.25
TNFRSF1B-204ENST00000536782 MRPL32Q9BYC8 188 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1B-204ENST00000536782 SCRT2Q9NQ03 307 aa13.49□□□□□ -0.25
TNFRSF1B-204ENST00000536782 TRBV7-9A0A0J9YWB2 115 aa13.48□□□□□ -0.25
TNFRSF1B-204ENST00000536782 NXPH4O95158 308 aa13.48□□□□□ -0.25
TNFRSF1B-204ENST00000536782 OR10J4P0C629 311 aa13.48□□□□□ -0.25
TNFRSF1B-204ENST00000536782 ZNF138P52744 262 aa13.48□□□□□ -0.25
TNFRSF1B-204ENST00000536782 FXYD5Q96DB9 178 aa13.48□□□□□ -0.25
TNFRSF1B-204ENST00000536782 HERC1Q15751 4861 aa13.47□□□□□ -0.25
TNFRSF1B-204ENST00000536782 ZNF415Q09FC8 603 aa13.47□□□□□ -0.25
TNFRSF1B-204ENST00000536782 Q6ZRN7 208 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1B-204ENST00000536782 HHLA3Q9XRX5 114 aa13.47□□□□□ -0.25
TNFRSF1B-204ENST00000536782 IFNA5P01569 189 aa13.46□□□□□ -0.25
TNFRSF1B-204ENST00000536782 GIPP09681 153 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF1B-204ENST00000536782 CSN1S1P47710 185 aa13.46□□□□□ -0.25
TNFRSF1B-204ENST00000536782 CRYBA4P53673 196 aa13.46□□□□□ -0.25
TNFRSF1B-204ENST00000536782 FHL2Q14192 279 aa13.46□□□□□ -0.25
TNFRSF1B-204ENST00000536782 MRPL23Q16540 153 aaKnown RBP13.46□□□□□ -0.25
TNFRSF1B-204ENST00000536782 Q8TAT8 98 aa13.46□□□□□ -0.25
TNFRSF1B-204ENST00000536782 PHYHIPLQ96FC7 376 aa13.46□□□□□ -0.25
TNFRSF1B-204ENST00000536782 C8orf49Q96NF6 230 aa13.46□□□□□ -0.25
TNFRSF1B-204ENST00000536782 LYPD5Q6UWN5 251 aa13.45□□□□□ -0.26
TNFRSF1B-204ENST00000536782 SCGB1C1Q8TD33 95 aa13.45□□□□□ -0.26
TNFRSF1B-204ENST00000536782 RBAKDNA6NC62 111 aa13.44□□□□□ -0.26
TNFRSF1B-204ENST00000536782 EREGO14944 169 aa13.44□□□□□ -0.26
TNFRSF1B-204ENST00000536782 OR7C2O60412 319 aa13.44□□□□□ -0.26
TNFRSF1B-204ENST00000536782 RANP62826 216 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1B-204ENST00000536782 MUC21Q5SSG8 566 aa13.44□□□□□ -0.26
TNFRSF1B-204ENST00000536782 NEGR1Q7Z3B1 354 aa13.44□□□□□ -0.26
TNFRSF1B-204ENST00000536782 LYPD1Q8N2G4 141 aa13.44□□□□□ -0.26
TNFRSF1B-204ENST00000536782 SMIM3Q9BZL3 60 aa13.44□□□□□ -0.26
TNFRSF1B-204ENST00000536782 PGPEP1Q9NXJ5 209 aa13.44□□□□□ -0.26
TNFRSF1B-204ENST00000536782 TRGV4A0A0C4DH28 118 aa13.43□□□□□ -0.26
TNFRSF1B-204ENST00000536782 ERVFC1-1P60608 527 aa13.43□□□□□ -0.26
TNFRSF1B-204ENST00000536782 ZNF266Q14584 549 aa13.43□□□□□ -0.26
TNFRSF1B-204ENST00000536782 NFE4Q86UQ8 179 aa13.42□□□□□ -0.26
TNFRSF1B-204ENST00000536782 AQP10Q96PS8 301 aa13.42□□□□□ -0.26
TNFRSF1B-204ENST00000536782 WFDC1Q9HC57 220 aa13.42□□□□□ -0.26
TNFRSF1B-204ENST00000536782 MDFICQ9P1T7 246 aa13.42□□□□□ -0.26
TNFRSF1B-204ENST00000536782 FAT1Q14517 4588 aa13.42□□□□□ -0.26
TNFRSF1B-204ENST00000536782 TRAV9-2A0A087WT02 112 aa13.41□□□□□ -0.26
TNFRSF1B-204ENST00000536782 UBE2L3P68036 154 aaKnown RBP13.41□□□□□ -0.26
TNFRSF1B-204ENST00000536782 FFAR4Q5NUL3 377 aa13.41□□□□□ -0.26
TNFRSF1B-204ENST00000536782 SPXQ9BT56 116 aa13.41□□□□□ -0.26
TNFRSF1B-204ENST00000536782 TNFRSF18Q9Y5U5 241 aa13.41□□□□□ -0.26
TNFRSF1B-204ENST00000536782 SFTA3P0C7M3 94 aa13.4□□□□□ -0.26
TNFRSF1B-204ENST00000536782 SRIP30626 198 aa13.4□□□□□ -0.26
TNFRSF1B-204ENST00000536782 Q6AWC8 147 aa13.4□□□□□ -0.26
TNFRSF1B-204ENST00000536782 FAM159AQ6UWV7 190 aa13.4□□□□□ -0.26
TNFRSF1B-204ENST00000536782 IQCF2Q8IXL9 164 aa13.4□□□□□ -0.26
TNFRSF1B-204ENST00000536782 RASL10AQ92737 203 aa13.4□□□□□ -0.26
TNFRSF1B-204ENST00000536782 ZNF479Q96JC4 524 aa13.4□□□□□ -0.26
TNFRSF1B-204ENST00000536782 LENEPQ9Y5L5 61 aa13.4□□□□□ -0.26
TNFRSF1B-204ENST00000536782 LY96Q9Y6Y9 160 aa13.4□□□□□ -0.26
TNFRSF1B-204ENST00000536782 TRGV11A0A075B6L2 103 aa13.39□□□□□ -0.27
TNFRSF1B-204ENST00000536782 DIRC3C9JPN6 131 aa13.39□□□□□ -0.27
TNFRSF1B-204ENST00000536782 K7EQD1 137 aa13.39□□□□□ -0.27
TNFRSF1B-204ENST00000536782 TMEM183BQ1AE95 376 aa13.39□□□□□ -0.27
TNFRSF1B-204ENST00000536782 KHDC3LQ587J8 217 aa13.39□□□□□ -0.27
TNFRSF1B-204ENST00000536782 CDPF1Q6NVV7 123 aa13.39□□□□□ -0.27
TNFRSF1B-204ENST00000536782 TMEM183AQ8IXX5 376 aa13.39□□□□□ -0.27
TNFRSF1B-204ENST00000536782 OR10G4Q8NGN3 311 aa13.39□□□□□ -0.27
TNFRSF1B-204ENST00000536782 PCNPQ8WW12 178 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1B-204ENST00000536782 ORM1P02763 201 aa13.38□□□□□ -0.27
TNFRSF1B-204ENST00000536782 TAS2R45P59539 299 aa13.38□□□□□ -0.27
TNFRSF1B-204ENST00000536782 K7EP13 123 aa13.37□□□□□ -0.27
TNFRSF1B-204ENST00000536782 GYPEP15421 78 aa13.37□□□□□ -0.27
TNFRSF1B-204ENST00000536782 FUSP35637 526 aaKnown RBP eCLIP13.37□□□□□ -0.27
TNFRSF1B-204ENST00000536782 ACOT6Q3I5F7 207 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1B-204ENST00000536782 Q5BKY6 102 aa13.37□□□□□ -0.27
TNFRSF1B-204ENST00000536782 INO80EQ8NBZ0 244 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1B-204ENST00000536782 TMED6Q8WW62 240 aa13.37□□□□□ -0.27
TNFRSF1B-204ENST00000536782 HYLS1Q96M11 299 aa13.37□□□□□ -0.27
TNFRSF1B-204ENST00000536782 EVI2AP22794 236 aa13.36□□□□□ -0.27
TNFRSF1B-204ENST00000536782 WFDC10BQ8IUB3 73 aa13.36□□□□□ -0.27
TNFRSF1B-204ENST00000536782 OR2T35Q8NGX2 323 aa13.36□□□□□ -0.27
TNFRSF1B-204ENST00000536782 MSRB1Q9NZV6 116 aa13.36□□□□□ -0.27
TNFRSF1B-204ENST00000536782 NAGKQ9UJ70 344 aa13.36□□□□□ -0.27
TNFRSF1B-204ENST00000536782 A0A087WTM6 91 aa13.35□□□□□ -0.27
TNFRSF1B-204ENST00000536782 EPM2AB3EWF7 344 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms