RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 ZNF503Q96F45 646 aa8.8□□□□□ -1
PRKDC-207ENST00000536483 LINC01587Q99440 93 aa8.8□□□□□ -1
PRKDC-207ENST00000536483 KLLNB2CW77 178 aa8.79□□□□□ -1
PRKDC-207ENST00000536483 F8W036 122 aa8.79□□□□□ -1
PRKDC-207ENST00000536483 M0R3E3 92 aa8.79□□□□□ -1
PRKDC-207ENST00000536483 CRISP2P16562 243 aa8.79□□□□□ -1
PRKDC-207ENST00000536483 LEPP41159 167 aa8.79□□□□□ -1
PRKDC-207ENST00000536483 GFI1BQ5VTD9 330 aa8.79□□□□□ -1
PRKDC-207ENST00000536483 TMEM263Q8WUH6 116 aaKnown RBP8.79□□□□□ -1
PRKDC-207ENST00000536483 MBD3L1Q8WWY6 194 aa8.79□□□□□ -1
PRKDC-207ENST00000536483 C16orf74Q96GX8 76 aa8.79□□□□□ -1
PRKDC-207ENST00000536483 LINC00467Q9BRT7 94 aa8.79□□□□□ -1
PRKDC-207ENST00000536483 PAXXQ9BUH6 204 aa8.79□□□□□ -1
PRKDC-207ENST00000536483 AGPAT4-IT1Q9H0P7 198 aa8.79□□□□□ -1
PRKDC-207ENST00000536483 PRM2P04554 102 aa8.78□□□□□ -1
PRKDC-207ENST00000536483 SLC25A5P05141 298 aaKnown RBP8.78□□□□□ -1
PRKDC-207ENST00000536483 KIR3DS1Q14943 382 aa8.78□□□□□ -1
PRKDC-207ENST00000536483 FFAR4Q5NUL3 377 aa8.78□□□□□ -1
PRKDC-207ENST00000536483 UBE2DNLQ8IWF7 75 aa8.78□□□□□ -1
PRKDC-207ENST00000536483 EXOC3-AS1Q8N2X6 119 aa8.78□□□□□ -1
PRKDC-207ENST00000536483 ARL6IP6Q8N6S5 226 aa8.78□□□□□ -1
PRKDC-207ENST00000536483 LINC00612Q8N6U2 182 aa8.78□□□□□ -1
PRKDC-207ENST00000536483 OR10G4Q8NGN3 311 aa8.78□□□□□ -1
PRKDC-207ENST00000536483 FAM213BQ8TBF2 198 aa8.78□□□□□ -1
PRKDC-207ENST00000536483 NKX6-2Q9C056 277 aaPredicted RBP8.78□□□□□ -1
PRKDC-207ENST00000536483 SH3BGRL3Q9H299 93 aa8.78□□□□□ -1
PRKDC-207ENST00000536483 AAMDCQ9H7C9 122 aa8.78□□□□□ -1
PRKDC-207ENST00000536483 RBAKDNA6NC62 111 aa8.77□□□□□ -1.01
PRKDC-207ENST00000536483 ZNF324O75467 553 aaPredicted RBP8.77□□□□□ -1.01
PRKDC-207ENST00000536483 TAS2R45P59539 299 aa8.77□□□□□ -1.01
PRKDC-207ENST00000536483 DAD1P61803 113 aa8.77□□□□□ -1.01
PRKDC-207ENST00000536483 ICAM4Q14773 271 aa8.77□□□□□ -1.01
PRKDC-207ENST00000536483 KHDC3LQ587J8 217 aa8.77□□□□□ -1.01
PRKDC-207ENST00000536483 Q6ZR54 194 aa8.77□□□□□ -1.01
PRKDC-207ENST00000536483 BLNKQ8WV28 456 aa8.77□□□□□ -1.01
PRKDC-207ENST00000536483 PYGO2Q9BRQ0 406 aa8.77□□□□□ -1.01
PRKDC-207ENST00000536483 TIMM8BQ9Y5J9 83 aaPredicted RBP8.77□□□□□ -1.01
PRKDC-207ENST00000536483 HSPG2P98160 4391 aa8.76□□□□□ -1.01
PRKDC-207ENST00000536483 CBY3A6NI87 242 aa8.76□□□□□ -1.01
PRKDC-207ENST00000536483 HTN3P15516 51 aa8.76□□□□□ -1.01
PRKDC-207ENST00000536483 ACOT6Q3I5F7 207 aaPredicted RBP8.76□□□□□ -1.01
PRKDC-207ENST00000536483 PQLC2Q6ZP29 291 aa8.76□□□□□ -1.01
PRKDC-207ENST00000536483 ZNF575Q86XF7 245 aa8.76□□□□□ -1.01
PRKDC-207ENST00000536483 EIF5A2Q9GZV4 153 aaKnown RBP8.76□□□□□ -1.01
PRKDC-207ENST00000536483 ZNF492Q9P255 531 aa8.76□□□□□ -1.01
PRKDC-207ENST00000536483 RBFOX3A6NFN3 312 aa8.75□□□□□ -1.01
PRKDC-207ENST00000536483 IFNA1P01562 189 aa8.75□□□□□ -1.01
PRKDC-207ENST00000536483 SFTA3P0C7M3 94 aa8.75□□□□□ -1.01
PRKDC-207ENST00000536483 PRB4P10163 310 aaPredicted RBP8.75□□□□□ -1.01
PRKDC-207ENST00000536483 PPT1P50897 306 aa8.75□□□□□ -1.01
PRKDC-207ENST00000536483 DAZ2Q13117 558 aaKnown RBP8.75□□□□□ -1.01
PRKDC-207ENST00000536483 ERCC8Q13216 396 aa8.75□□□□□ -1.01
PRKDC-207ENST00000536483 ANXA2RQ3ZCQ2 193 aa8.75□□□□□ -1.01
PRKDC-207ENST00000536483 ZNF506Q5JVG8 444 aa8.75□□□□□ -1.01
PRKDC-207ENST00000536483 ZFAND2AQ8N6M9 145 aa8.75□□□□□ -1.01
PRKDC-207ENST00000536483 C18orf15Q96N68 181 aa8.75□□□□□ -1.01
PRKDC-207ENST00000536483 KRTAP4-5Q9BYR2 181 aa8.75□□□□□ -1.01
PRKDC-207ENST00000536483 LENEPQ9Y5L5 61 aa8.75□□□□□ -1.01
PRKDC-207ENST00000536483 LRP1BQ9NZR2 4599 aa8.75□□□□□ -1.01
PRKDC-207ENST00000536483 C7orf71A4D174 169 aa8.74□□□□□ -1.01
PRKDC-207ENST00000536483 OR7C2O60412 319 aa8.74□□□□□ -1.01
PRKDC-207ENST00000536483 OR10J4P0C629 311 aa8.74□□□□□ -1.01
PRKDC-207ENST00000536483 ADCYAP1P18509 176 aa8.74□□□□□ -1.01
PRKDC-207ENST00000536483 BTN1A1Q13410 526 aa8.74□□□□□ -1.01
PRKDC-207ENST00000536483 RNF212Q495C1 297 aa8.74□□□□□ -1.01
PRKDC-207ENST00000536483 SOHLH1Q5JUK2 328 aa8.74□□□□□ -1.01
PRKDC-207ENST00000536483 RXFP4Q8TDU9 374 aa8.74□□□□□ -1.01
PRKDC-207ENST00000536483 SFT2D1Q8WV19 159 aa8.74□□□□□ -1.01
PRKDC-207ENST00000536483 VGLL1Q99990 258 aa8.74□□□□□ -1.01
PRKDC-207ENST00000536483 TRAV12-3A0A0B4J271 114 aa8.73□□□□□ -1.01
PRKDC-207ENST00000536483 ATP5G1P05496 136 aa8.73□□□□□ -1.01
PRKDC-207ENST00000536483 ATP5G3P48201 142 aa8.73□□□□□ -1.01
PRKDC-207ENST00000536483 FHITP49789 147 aa8.73□□□□□ -1.01
PRKDC-207ENST00000536483 ZNF138P52744 262 aa8.73□□□□□ -1.01
PRKDC-207ENST00000536483 RANP62826 216 aaKnown RBP8.73□□□□□ -1.01
PRKDC-207ENST00000536483 UBE2L3P68036 154 aaKnown RBP8.73□□□□□ -1.01
PRKDC-207ENST00000536483 SRSF3P84103 164 aaKnown RBP8.73□□□□□ -1.01
PRKDC-207ENST00000536483 TMEM78Q5T7P6 136 aa8.73□□□□□ -1.01
PRKDC-207ENST00000536483 FAM122CQ6P4D5 195 aa8.73□□□□□ -1.01
PRKDC-207ENST00000536483 C15orf53Q8NAA6 179 aa8.73□□□□□ -1.01
PRKDC-207ENST00000536483 ACTR3CQ9C0K3 210 aaPredicted RBP8.73□□□□□ -1.01
PRKDC-207ENST00000536483 Q9H3A6 140 aa8.73□□□□□ -1.01
PRKDC-207ENST00000536483 OTORQ9NRC9 128 aa8.73□□□□□ -1.01
PRKDC-207ENST00000536483 IGKV2-40A0A087WW87 121 aaPredicted RBP8.72□□□□□ -1.01
PRKDC-207ENST00000536483 CTXND1A0A1B0GTU2 59 aa8.72□□□□□ -1.01
PRKDC-207ENST00000536483 A0A1W2PPV4 95 aa8.72□□□□□ -1.01
PRKDC-207ENST00000536483 DIRC3C9JPN6 131 aa8.72□□□□□ -1.01
PRKDC-207ENST00000536483 SCO1O75880 301 aa8.72□□□□□ -1.01
PRKDC-207ENST00000536483 IGKV2D-40P01614 121 aaPredicted RBP8.72□□□□□ -1.01
PRKDC-207ENST00000536483 STAG3L2P0CL84 134 aa8.72□□□□□ -1.01
PRKDC-207ENST00000536483 STAG3L3P0CL85 134 aa8.72□□□□□ -1.01
PRKDC-207ENST00000536483 DEFB130BP0DP73 79 aa8.72□□□□□ -1.01
PRKDC-207ENST00000536483 DEFB130AP0DP74 79 aa8.72□□□□□ -1.01
PRKDC-207ENST00000536483 CSN1S1P47710 185 aa8.72□□□□□ -1.01
PRKDC-207ENST00000536483 FAM3BP58499 235 aaPredicted RBP8.72□□□□□ -1.01
PRKDC-207ENST00000536483 IBA57Q5T440 356 aaKnown RBP8.72□□□□□ -1.01
PRKDC-207ENST00000536483 C1orf134Q5TEV5 83 aa8.72□□□□□ -1.01
PRKDC-207ENST00000536483 TMEM88Q6PEY1 159 aa8.72□□□□□ -1.01
PRKDC-207ENST00000536483 C11orf72Q8NBR9 251 aa8.72□□□□□ -1.01
PRKDC-207ENST00000536483 CLRN3Q8NCR9 226 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms