RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 MRPS26Q9BYN8 205 aaKnown RBP4.45□□□□□ -1.7
CPSF7-214ENST00000535222 RBM38Q9H0Z9 239 aaKnown RBP4.45□□□□□ -1.7
CPSF7-214ENST00000535222 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.45□□□□□ -1.7
CPSF7-214ENST00000535222 PLCXD1Q9NUJ7 323 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 EHFQ9NZC4 300 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 ANAPC10Q9UM13 185 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 CCDC160A6NGH7 325 aa4.44□□□□□ -1.7
CPSF7-214ENST00000535222 ORM2P19652 201 aa4.44□□□□□ -1.7
CPSF7-214ENST00000535222 PI3P19957 117 aa4.44□□□□□ -1.7
CPSF7-214ENST00000535222 S100PP25815 95 aa4.44□□□□□ -1.7
CPSF7-214ENST00000535222 AKR1C2P52895 323 aa4.44□□□□□ -1.7
CPSF7-214ENST00000535222 RND3P61587 244 aa4.44□□□□□ -1.7
CPSF7-214ENST00000535222 TRIM16LQ309B1 348 aa4.44□□□□□ -1.7
CPSF7-214ENST00000535222 LCN15Q6UWW0 184 aa4.44□□□□□ -1.7
CPSF7-214ENST00000535222 Q6ZQT7 251 aa4.44□□□□□ -1.7
CPSF7-214ENST00000535222 LINC00299Q6ZSB3 139 aa4.44□□□□□ -1.7
CPSF7-214ENST00000535222 STPG4Q8N801 248 aa4.44□□□□□ -1.7
CPSF7-214ENST00000535222 LYPD6BQ8NI32 183 aa4.44□□□□□ -1.7
CPSF7-214ENST00000535222 LRRC20Q8TCA0 184 aa4.44□□□□□ -1.7
CPSF7-214ENST00000535222 C12orf57Q99622 126 aa4.44□□□□□ -1.7
CPSF7-214ENST00000535222 TMEM147Q9BVK8 224 aa4.44□□□□□ -1.7
CPSF7-214ENST00000535222 AUNIPQ9H7T9 357 aa4.44□□□□□ -1.7
CPSF7-214ENST00000535222 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.43□□□□□ -1.7
CPSF7-214ENST00000535222 IGHV3-16A0A0C4DH30 117 aa4.43□□□□□ -1.7
CPSF7-214ENST00000535222 XKRY2A2RUG3 117 aa4.43□□□□□ -1.7
CPSF7-214ENST00000535222 PMS2P5A8MQ11 134 aa4.43□□□□□ -1.7
CPSF7-214ENST00000535222 PDCD5O14737 125 aa4.43□□□□□ -1.7
CPSF7-214ENST00000535222 ZNF253O75346 499 aa4.43□□□□□ -1.7
CPSF7-214ENST00000535222 APOA1P02647 267 aa4.43□□□□□ -1.7
CPSF7-214ENST00000535222 SMIM6P0DI80 62 aa4.43□□□□□ -1.7
CPSF7-214ENST00000535222 SMIM18P0DKX4 95 aa4.43□□□□□ -1.7
CPSF7-214ENST00000535222 RNASE4P34096 147 aaKnown RBP4.43□□□□□ -1.7
CPSF7-214ENST00000535222 PLP1P60201 277 aa4.43□□□□□ -1.7
CPSF7-214ENST00000535222 SPHARQ15513 63 aa4.43□□□□□ -1.7
CPSF7-214ENST00000535222 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
CPSF7-214ENST00000535222 ZFAND2AQ8N6M9 145 aa4.43□□□□□ -1.7
CPSF7-214ENST00000535222 CYB561D1Q8N8Q1 229 aa4.43□□□□□ -1.7
CPSF7-214ENST00000535222 RNASE11Q8TAA1 199 aaKnown RBP4.43□□□□□ -1.7
CPSF7-214ENST00000535222 SAT2Q96F10 170 aaPredicted RBP4.43□□□□□ -1.7
CPSF7-214ENST00000535222 LINC00477Q96M19 166 aa4.43□□□□□ -1.7
CPSF7-214ENST00000535222 IFT46Q9NQC8 304 aa4.43□□□□□ -1.7
CPSF7-214ENST00000535222 CACFD1Q9UGQ2 172 aa4.43□□□□□ -1.7
CPSF7-214ENST00000535222 SSR3Q9UNL2 185 aa4.43□□□□□ -1.7
CPSF7-214ENST00000535222 URGCP-MRPS24S4R325 110 aa4.43□□□□□ -1.7
CPSF7-214ENST00000535222 TRAV1-1A0A0B4J248 108 aa4.42□□□□□ -1.7
CPSF7-214ENST00000535222 FBLL1A6NHQ2 334 aaKnown RBP4.42□□□□□ -1.7
CPSF7-214ENST00000535222 LINC00587B1AMM8 73 aa4.42□□□□□ -1.7
CPSF7-214ENST00000535222 NDUFS6O75380 124 aaKnown RBP4.42□□□□□ -1.7
CPSF7-214ENST00000535222 GNAO1P09471 354 aa4.42□□□□□ -1.7
CPSF7-214ENST00000535222 OR4E1P0C645 316 aa4.42□□□□□ -1.7
CPSF7-214ENST00000535222 RPL13AP40429 203 aaKnown RBP4.42□□□□□ -1.7
CPSF7-214ENST00000535222 SRPXP78539 464 aa4.42□□□□□ -1.7
CPSF7-214ENST00000535222 FABP5Q01469 135 aa4.42□□□□□ -1.7
CPSF7-214ENST00000535222 SMCO1Q147U7 214 aa4.42□□□□□ -1.7
CPSF7-214ENST00000535222 TMEM183BQ1AE95 376 aa4.42□□□□□ -1.7
CPSF7-214ENST00000535222 ZNF674Q2M3X9 581 aa4.42□□□□□ -1.7
CPSF7-214ENST00000535222 LAIR2Q6ISS4 152 aa4.42□□□□□ -1.7
CPSF7-214ENST00000535222 TMEM183AQ8IXX5 376 aa4.42□□□□□ -1.7
CPSF7-214ENST00000535222 FER1L6-AS1Q8NA97 138 aa4.42□□□□□ -1.7
CPSF7-214ENST00000535222 OR1S1Q8NH92 325 aa4.42□□□□□ -1.7
CPSF7-214ENST00000535222 MARCH1Q8TCQ1 289 aa4.42□□□□□ -1.7
CPSF7-214ENST00000535222 UFD1Q92890 307 aa4.42□□□□□ -1.7
CPSF7-214ENST00000535222 TP53RKQ96S44 253 aa4.42□□□□□ -1.7
CPSF7-214ENST00000535222 MGLLQ99685 303 aa4.42□□□□□ -1.7
CPSF7-214ENST00000535222 Q9H521 79 aa4.42□□□□□ -1.7
CPSF7-214ENST00000535222 TREM1Q9NP99 234 aa4.42□□□□□ -1.7
CPSF7-214ENST00000535222 A0A0A6YYH2 397 aa4.41□□□□□ -1.7
CPSF7-214ENST00000535222 A6NJ64 397 aa4.41□□□□□ -1.7
CPSF7-214ENST00000535222 M0R2P5 195 aa4.41□□□□□ -1.7
CPSF7-214ENST00000535222 IFNA7P01567 189 aa4.41□□□□□ -1.7
CPSF7-214ENST00000535222 GPX1P07203 203 aa4.41□□□□□ -1.7
CPSF7-214ENST00000535222 COX6A2Q02221 97 aa4.41□□□□□ -1.7
CPSF7-214ENST00000535222 RAB31Q13636 194 aa4.41□□□□□ -1.7
CPSF7-214ENST00000535222 PRR9Q5T870 116 aa4.41□□□□□ -1.7
CPSF7-214ENST00000535222 ZFP1Q6P2D0 407 aa4.41□□□□□ -1.7
CPSF7-214ENST00000535222 DHRSXQ8N5I4 330 aa4.41□□□□□ -1.7
CPSF7-214ENST00000535222 DIRC1Q969H9 104 aa4.41□□□□□ -1.7
CPSF7-214ENST00000535222 MND1Q9BWT6 205 aa4.41□□□□□ -1.7
CPSF7-214ENST00000535222 ACOT13Q9NPJ3 140 aa4.41□□□□□ -1.7
CPSF7-214ENST00000535222 PXMP4Q9Y6I8 212 aa4.41□□□□□ -1.7
CPSF7-214ENST00000535222 TRAV18A0A075B6X5 111 aa4.4□□□□□ -1.71
CPSF7-214ENST00000535222 TRBV7-9A0A0J9YWB2 115 aa4.4□□□□□ -1.71
CPSF7-214ENST00000535222 CEBPZOSA8MTT3 80 aa4.4□□□□□ -1.71
CPSF7-214ENST00000535222 H0Y8G0 127 aa4.4□□□□□ -1.71
CPSF7-214ENST00000535222 SLC17A3O00476 420 aa4.4□□□□□ -1.71
CPSF7-214ENST00000535222 TNFAIP8O95379 198 aa4.4□□□□□ -1.71
CPSF7-214ENST00000535222 HLA-DQA1P01909 254 aa4.4□□□□□ -1.71
CPSF7-214ENST00000535222 MBP02144 154 aa4.4□□□□□ -1.71
CPSF7-214ENST00000535222 PMP2P02689 132 aa4.4□□□□□ -1.71
CPSF7-214ENST00000535222 S100A8P05109 93 aa4.4□□□□□ -1.71
CPSF7-214ENST00000535222 STAG3L3P0CL85 134 aa4.4□□□□□ -1.71
CPSF7-214ENST00000535222 RAB3BP20337 219 aa4.4□□□□□ -1.71
CPSF7-214ENST00000535222 INPP1P49441 399 aa4.4□□□□□ -1.71
CPSF7-214ENST00000535222 ZNF138P52744 262 aa4.4□□□□□ -1.71
CPSF7-214ENST00000535222 TAS2R46P59540 309 aa4.4□□□□□ -1.71
CPSF7-214ENST00000535222 MIAQ16674 131 aa4.4□□□□□ -1.71
CPSF7-214ENST00000535222 LYSMD2Q8IV50 215 aa4.4□□□□□ -1.71
CPSF7-214ENST00000535222 OR5H6Q8NGV6 325 aa4.4□□□□□ -1.71
CPSF7-214ENST00000535222 PRSS3P2Q8NHM4 247 aa4.4□□□□□ -1.71
CPSF7-214ENST00000535222 DTD1Q8TEA8 209 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms