RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 ZNF714Q96N38 554 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 TRGV9Q99603 122 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 FOXC2Q99958 501 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 TMEM14BQ9NUH8 114 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 MRPL35Q9NZE8 188 aaKnown RBP2.42□□□□□ -2.02
CSDE1-216ENST00000534389 FOXA2Q9Y261 457 aaPredicted RBP2.42□□□□□ -2.02
CSDE1-216ENST00000534389 ASCC3Q8N3C0 2202 aaKnown RBP2.42□□□□□ -2.02
CSDE1-216ENST00000534389 HEATR1Q9H583 2144 aaKnown RBP2.42□□□□□ -2.02
CSDE1-216ENST00000534389 RP1P56715 2156 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 KNTC1P50748 2209 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 TNRC6BQ9UPQ9 1833 aaKnown RBP2.41□□□□□ -2.02
CSDE1-216ENST00000534389 IGHV3OR15-7A0A075B7D8 119 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 TRAV8-4A0A0B4J246 113 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 LOC107984156A0A0G2JMH3 177 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 TRBV6-1A0A0K0K1D8 114 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 TRBV7-7A0A0K0K1E9 115 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 TMEM30CPA0ZSE6 113 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 C10orf142B7Z368 130 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 INS-IGF2F8WCM5 200 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 F8WDY8 70 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 J3KT08 172 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 M0R2P5 195 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 LGALS9O00182 355 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 UPK2O00526 184 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 DUX1O43812 170 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 IGHV3-48P01763 117 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 IGHV3-13P01766 116 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 CXCL10P02778 98 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 TCRAP04437 139 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 CECR9P0C854 216 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 CFC1BP0CG36 223 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 CFC1P0CG37 223 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 LIFP15018 202 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 FKBP2P26885 142 aaKnown RBP2.41□□□□□ -2.02
CSDE1-216ENST00000534389 RPL13AP40429 203 aaKnown RBP2.41□□□□□ -2.02
CSDE1-216ENST00000534389 LEPP41159 167 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 SSR4P51571 173 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 TNFAIP6P98066 277 aaPredicted RBP2.41□□□□□ -2.02
CSDE1-216ENST00000534389 ZNF876PQ49A33 203 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 PSMG4Q5JS54 123 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.41□□□□□ -2.02
CSDE1-216ENST00000534389 LYZL1Q6UWQ5 148 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 HRCT1Q6UXD1 115 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 NDUFA11Q86Y39 141 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 ARL17AQ8IVW1 177 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 C3orf22Q8N5N4 141 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 OR11H6Q8NGC7 330 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 OR10J6PQ8NGY7 276 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 FMC1Q96HJ9 113 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 LINC00477Q96M19 166 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 DUX3Q96PT4 197 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 TPPP3Q9BW30 176 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 DEFB126Q9BYW3 111 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 PLA2G2FQ9BZM2 168 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 IFI27L2Q9H2X8 130 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 Q9H3A6 140 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 A0A0C4DFX4 3053 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 HCFC1P51610 2035 aa2.41□□□□□ -2.02
CSDE1-216ENST00000534389 IGLV9-49A0A0B4J1Y8 123 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 TRAV2A0A0B4J234 112 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 FAM236AA0A1B0GUQ0 79 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 FAM236BA0A1B0GV22 79 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 E7EUB6 86 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 H3BVH4 76 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 J3QLI3 93 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 ATP6V0E1O15342 81 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 SLC25A20O43772 301 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 COX7A2P2O60397 106 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 ATP5LO75964 103 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 NDUFA3O95167 84 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 IGHV3-33P01772 117 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 IGHV3-9P01782 118 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 GP9P14770 177 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 COX6B1P14854 86 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 SLC25A16P16260 332 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 ORM2P19652 201 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 LINC01547P58512 204 aaPredicted RBP2.4□□□□□ -2.03
CSDE1-216ENST00000534389 PCBD1P61457 104 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 ZNF415Q09FC8 603 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 POU2AF1Q16633 256 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 TMEM155Q4W5P6 130 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 C2orf83Q53S99 150 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 DEFB121Q5J5C9 76 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 C9orf153Q5TBE3 101 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 C10orf113Q5VZT2 155 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 ZNF826PQ6ZT77 177 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 GOLT1AQ6ZVE7 132 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 ASCL5Q7RTU5 278 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 AAED1Q7RTV5 226 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 PRNTQ86SH4 94 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 PDPNQ86YL7 162 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 ORMDL3Q8N138 153 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 EXOC3-AS1Q8N2X6 119 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 Q8N8P6 123 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 ZNRF2Q8NHG8 242 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 SMCR5Q8TEV8 140 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 LINC00526Q96FQ7 95 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 TIMD4Q96H15 378 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 FAM19A4Q96LR4 140 aa2.4□□□□□ -2.03
CSDE1-216ENST00000534389 PRADC1Q9BSG0 188 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms