RNA–Protein interactions for RNA: ENST00000534207.5

CHID1-223, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 1,171 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-223ENST00000534207 SMIM12Q96EX1 92 aa13.07□□□□□ -0.32
CHID1-223ENST00000534207 LINC00479Q96M42 142 aa13.07□□□□□ -0.32
CHID1-223ENST00000534207 EIF5A2Q9GZV4 153 aaKnown RBP13.07□□□□□ -0.32
CHID1-223ENST00000534207 TREM1Q9NP99 234 aa13.07□□□□□ -0.32
CHID1-223ENST00000534207 TRAV12-2A0A075B6T6 113 aa13.06□□□□□ -0.32
CHID1-223ENST00000534207 TRAV34A0A0B4J273 112 aa13.06□□□□□ -0.32
CHID1-223ENST00000534207 H7BYZ3 331 aa13.06□□□□□ -0.32
CHID1-223ENST00000534207 LINC00467Q9BRT7 94 aa13.06□□□□□ -0.32
CHID1-223ENST00000534207 NIPSNAP3BQ9BS92 247 aa13.06□□□□□ -0.32
CHID1-223ENST00000534207 MIFP14174 115 aa13.05□□□□□ -0.32
CHID1-223ENST00000534207 RPL35P42766 123 aaKnown RBP13.05□□□□□ -0.32
CHID1-223ENST00000534207 PEA15Q15121 130 aa13.05□□□□□ -0.32
CHID1-223ENST00000534207 SMUG1Q53HV7 270 aa13.05□□□□□ -0.32
CHID1-223ENST00000534207 TMEM183AQ8IXX5 376 aa13.05□□□□□ -0.32
CHID1-223ENST00000534207 PYGO2Q9BRQ0 406 aa13.05□□□□□ -0.32
CHID1-223ENST00000534207 MED9Q9NWA0 146 aa13.05□□□□□ -0.32
CHID1-223ENST00000534207 RAB19A4D1S5 217 aa13.04□□□□□ -0.32
CHID1-223ENST00000534207 ZNF324O75467 553 aaPredicted RBP13.04□□□□□ -0.32
CHID1-223ENST00000534207 KIR3DS1Q14943 382 aa13.04□□□□□ -0.32
CHID1-223ENST00000534207 PRR9Q5T870 116 aa13.04□□□□□ -0.32
CHID1-223ENST00000534207 OR11H2Q8NH07 326 aa13.04□□□□□ -0.32
CHID1-223ENST00000534207 SGK494Q96LW2 274 aa13.04□□□□□ -0.32
CHID1-223ENST00000534207 X6R8D5 127 aa13.04□□□□□ -0.32
CHID1-223ENST00000534207 TRAV21A0A0B4J279 112 aa13.03□□□□□ -0.32
CHID1-223ENST00000534207 C9JCJ5 164 aa13.03□□□□□ -0.32
CHID1-223ENST00000534207 RBMY1A1P0DJD3 496 aaKnown RBP13.03□□□□□ -0.32
CHID1-223ENST00000534207 RBMY1CP0DJD4 496 aa13.03□□□□□ -0.32
CHID1-223ENST00000534207 BTN1A1Q13410 526 aa13.03□□□□□ -0.32
CHID1-223ENST00000534207 RBMY1FQ15415 496 aaKnown RBP13.03□□□□□ -0.32
CHID1-223ENST00000534207 TMEM208Q9BTX3 173 aa13.03□□□□□ -0.32
CHID1-223ENST00000534207 MLST8Q9BVC4 326 aa13.03□□□□□ -0.32
CHID1-223ENST00000534207 DNAH9Q9NYC9 4486 aa13.03□□□□□ -0.32
CHID1-223ENST00000534207 TRAV12-3A0A0B4J271 114 aa13.02□□□□□ -0.33
CHID1-223ENST00000534207 SRP19P09132 144 aaKnown RBP13.02□□□□□ -0.33
CHID1-223ENST00000534207 RNASE4P34096 147 aaKnown RBP13.02□□□□□ -0.33
CHID1-223ENST00000534207 C8orf49Q96NF6 230 aa13.02□□□□□ -0.33
CHID1-223ENST00000534207 C11orf68Q9H3H3 251 aaKnown RBP13.02□□□□□ -0.33
CHID1-223ENST00000534207 RETNQ9HD89 108 aa13.02□□□□□ -0.33
CHID1-223ENST00000534207 NBEAL2Q6ZNJ1 2754 aa13.01□□□□□ -0.33
CHID1-223ENST00000534207 J3KRW8 73 aa13.01□□□□□ -0.33
CHID1-223ENST00000534207 GCGP01275 180 aa13.01□□□□□ -0.33
CHID1-223ENST00000534207 PFN1P07737 140 aaKnown RBP13.01□□□□□ -0.33
CHID1-223ENST00000534207 BAGE2Q86Y30 109 aa13.01□□□□□ -0.33
CHID1-223ENST00000534207 LINC01587Q99440 93 aa13.01□□□□□ -0.33
CHID1-223ENST00000534207 DERL1Q9BUN8 251 aa13.01□□□□□ -0.33
CHID1-223ENST00000534207 PARLQ9H300 379 aa13.01□□□□□ -0.33
CHID1-223ENST00000534207 U3KQK5 164 aa13.01□□□□□ -0.33
CHID1-223ENST00000534207 COL7A1Q02388 2944 aa13.01□□□□□ -0.33
CHID1-223ENST00000534207 TMEM189A5PLL7 270 aa13□□□□□ -0.33
CHID1-223ENST00000534207 GNG4P50150 75 aa13□□□□□ -0.33
CHID1-223ENST00000534207 RRN3P1Q2M238 152 aa13□□□□□ -0.33
CHID1-223ENST00000534207 TDRG1Q3Y452 100 aa13□□□□□ -0.33
CHID1-223ENST00000534207 ANXA2RQ3ZCQ2 193 aa13□□□□□ -0.33
CHID1-223ENST00000534207 ZNF493Q6ZR52 646 aa13□□□□□ -0.33
CHID1-223ENST00000534207 Q8NAQ8 132 aa13□□□□□ -0.33
CHID1-223ENST00000534207 BIN3Q9NQY0 253 aa13□□□□□ -0.33
CHID1-223ENST00000534207 LY96Q9Y6Y9 160 aa13□□□□□ -0.33
CHID1-223ENST00000534207 TENM3Q9P273 2699 aa13□□□□□ -0.33
CHID1-223ENST00000534207 FABP5P3A8MUU1 101 aa12.99□□□□□ -0.33
CHID1-223ENST00000534207 ZNF674Q2M3X9 581 aa12.99□□□□□ -0.33
CHID1-223ENST00000534207 FAM74A3Q4VXF1 159 aa12.99□□□□□ -0.33
CHID1-223ENST00000534207 CENPWQ5EE01 88 aa12.99□□□□□ -0.33
CHID1-223ENST00000534207 EIF4E3Q8N5X7 224 aaKnown RBP12.99□□□□□ -0.33
CHID1-223ENST00000534207 ZC2HC1AQ96GY0 325 aa12.99□□□□□ -0.33
CHID1-223ENST00000534207 TRBV20OR9-2A0A075B6H5 130 aa12.98□□□□□ -0.33
CHID1-223ENST00000534207 IGHV1OR15-1A0A075B7D0 117 aa12.98□□□□□ -0.33
CHID1-223ENST00000534207 ZNF80P51504 273 aaPredicted RBP12.98□□□□□ -0.33
CHID1-223ENST00000534207 UQCC3Q6UW78 93 aa12.98□□□□□ -0.33
CHID1-223ENST00000534207 TMEM263Q8WUH6 116 aaKnown RBP12.98□□□□□ -0.33
CHID1-223ENST00000534207 C16orf74Q96GX8 76 aa12.98□□□□□ -0.33
CHID1-223ENST00000534207 KCNS1Q96KK3 526 aa12.98□□□□□ -0.33
CHID1-223ENST00000534207 IGHV3OR16-12A0A075B7B8 117 aa12.97□□□□□ -0.33
CHID1-223ENST00000534207 LINC00862A6NCI5 91 aa12.97□□□□□ -0.33
CHID1-223ENST00000534207 IGLV2-8P01709 118 aa12.97□□□□□ -0.33
CHID1-223ENST00000534207 FAM162BQ5T6X4 162 aa12.97□□□□□ -0.33
CHID1-223ENST00000534207 IGHV4-28A0A0C4DH34 117 aa12.96□□□□□ -0.33
CHID1-223ENST00000534207 IBA57Q5T440 356 aaKnown RBP12.96□□□□□ -0.33
CHID1-223ENST00000534207 FAM159AQ6UWV7 190 aa12.96□□□□□ -0.33
CHID1-223ENST00000534207 RNASE8Q8TDE3 154 aaKnown RBP12.96□□□□□ -0.33
CHID1-223ENST00000534207 TP53TG3Q9ULZ0 132 aa12.96□□□□□ -0.33
CHID1-223ENST00000534207 HUWE1Q7Z6Z7 4374 aaKnown RBP12.95□□□□□ -0.34
CHID1-223ENST00000534207 TEX48A0A1B0GUV7 120 aa12.95□□□□□ -0.34
CHID1-223ENST00000534207 SRSF3P84103 164 aaKnown RBP12.95□□□□□ -0.34
CHID1-223ENST00000534207 SMIM7Q9BQ49 75 aa12.95□□□□□ -0.34
CHID1-223ENST00000534207 TRGV11A0A075B6L2 103 aa12.94□□□□□ -0.34
CHID1-223ENST00000534207 ZNF727A8MUV8 499 aa12.94□□□□□ -0.34
CHID1-223ENST00000534207 ZNF705GA8MUZ8 300 aaPredicted RBP12.94□□□□□ -0.34
CHID1-223ENST00000534207 C9JQL5 133 aa12.94□□□□□ -0.34
CHID1-223ENST00000534207 CRIP1P50238 77 aa12.94□□□□□ -0.34
CHID1-223ENST00000534207 SDF2L1Q9HCN8 221 aa12.94□□□□□ -0.34
CHID1-223ENST00000534207 SH2D1AO60880 128 aa12.93□□□□□ -0.34
CHID1-223ENST00000534207 LINC01559Q495D7 138 aa12.93□□□□□ -0.34
CHID1-223ENST00000534207 Q6ZQT7 251 aa12.93□□□□□ -0.34
CHID1-223ENST00000534207 NHLRC2Q8NBF2 726 aa12.93□□□□□ -0.34
CHID1-223ENST00000534207 EDA2RQ9HAV5 297 aa12.93□□□□□ -0.34
CHID1-223ENST00000534207 PLAC8L1A1L4L8 177 aa12.92□□□□□ -0.34
CHID1-223ENST00000534207 CBY3A6NI87 242 aa12.92□□□□□ -0.34
CHID1-223ENST00000534207 CXCL1P09341 107 aa12.92□□□□□ -0.34
CHID1-223ENST00000534207 CEBPGP53567 150 aa12.92□□□□□ -0.34
CHID1-223ENST00000534207 SOHLH1Q5JUK2 328 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms