RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 TREM1Q9NP99 234 aa12.53□□□□□ -0.4
CTSB-229ENST00000533572 XCL2Q9UBD3 114 aa12.53□□□□□ -0.4
CTSB-229ENST00000533572 GOLT1BQ9Y3E0 138 aa12.53□□□□□ -0.4
CTSB-229ENST00000533572 A0A0J9YWU9 116 aa12.52□□□□□ -0.41
CTSB-229ENST00000533572 RAB19A4D1S5 217 aa12.52□□□□□ -0.41
CTSB-229ENST00000533572 M0R2Z0 102 aa12.52□□□□□ -0.41
CTSB-229ENST00000533572 PRB4P10163 310 aaPredicted RBP12.52□□□□□ -0.41
CTSB-229ENST00000533572 Q8TAT8 98 aa12.52□□□□□ -0.41
CTSB-229ENST00000533572 SMIM12Q96EX1 92 aa12.52□□□□□ -0.41
CTSB-229ENST00000533572 TRAV34A0A0B4J273 112 aa12.51□□□□□ -0.41
CTSB-229ENST00000533572 GIG44P09565 113 aaPredicted RBP12.51□□□□□ -0.41
CTSB-229ENST00000533572 FXYD7P58549 80 aa12.51□□□□□ -0.41
CTSB-229ENST00000533572 Q86TA4 180 aa12.51□□□□□ -0.41
CTSB-229ENST00000533572 ZFAND2AQ8N6M9 145 aa12.51□□□□□ -0.41
CTSB-229ENST00000533572 CSNK1G2-AS1Q8NCQ2 148 aa12.51□□□□□ -0.41
CTSB-229ENST00000533572 LINC00479Q96M42 142 aa12.51□□□□□ -0.41
CTSB-229ENST00000533572 NIPSNAP3BQ9BS92 247 aa12.51□□□□□ -0.41
CTSB-229ENST00000533572 AGRNO00468 2067 aa12.5□□□□□ -0.41
CTSB-229ENST00000533572 C7orf71A4D174 169 aa12.5□□□□□ -0.41
CTSB-229ENST00000533572 CRXO43186 299 aaPredicted RBP12.5□□□□□ -0.41
CTSB-229ENST00000533572 LTAP01374 205 aa12.5□□□□□ -0.41
CTSB-229ENST00000533572 RPL35P42766 123 aaKnown RBP12.5□□□□□ -0.41
CTSB-229ENST00000533572 SMUG1Q53HV7 270 aa12.5□□□□□ -0.41
CTSB-229ENST00000533572 COX8CQ7Z4L0 72 aa12.5□□□□□ -0.41
CTSB-229ENST00000533572 OR11H2Q8NH07 326 aa12.5□□□□□ -0.41
CTSB-229ENST00000533572 SGK494Q96LW2 274 aa12.5□□□□□ -0.41
CTSB-229ENST00000533572 H7BYZ3 331 aa12.49□□□□□ -0.41
CTSB-229ENST00000533572 GFI1BQ5VTD9 330 aa12.49□□□□□ -0.41
CTSB-229ENST00000533572 BAGE2Q86Y30 109 aa12.49□□□□□ -0.41
CTSB-229ENST00000533572 TMEM183AQ8IXX5 376 aa12.49□□□□□ -0.41
CTSB-229ENST00000533572 TMEM208Q9BTX3 173 aa12.49□□□□□ -0.41
CTSB-229ENST00000533572 TRAV12-2A0A075B6T6 113 aa12.48□□□□□ -0.41
CTSB-229ENST00000533572 TRAV21A0A0B4J279 112 aa12.48□□□□□ -0.41
CTSB-229ENST00000533572 CXorf65A6NEN9 183 aa12.48□□□□□ -0.41
CTSB-229ENST00000533572 SMIM9A6NGZ8 99 aa12.48□□□□□ -0.41
CTSB-229ENST00000533572 SRP19P09132 144 aaKnown RBP12.48□□□□□ -0.41
CTSB-229ENST00000533572 GNG4P50150 75 aa12.48□□□□□ -0.41
CTSB-229ENST00000533572 Q6AWC8 147 aa12.48□□□□□ -0.41
CTSB-229ENST00000533572 NEU1Q99519 415 aa12.48□□□□□ -0.41
CTSB-229ENST00000533572 BIN3Q9NQY0 253 aa12.48□□□□□ -0.41
CTSB-229ENST00000533572 C9JCJ5 164 aa12.47□□□□□ -0.41
CTSB-229ENST00000533572 J3KRW8 73 aa12.47□□□□□ -0.41
CTSB-229ENST00000533572 RNASE4P34096 147 aaKnown RBP12.47□□□□□ -0.41
CTSB-229ENST00000533572 FAM74A3Q4VXF1 159 aa12.47□□□□□ -0.41
CTSB-229ENST00000533572 UQCC3Q6UW78 93 aa12.47□□□□□ -0.41
CTSB-229ENST00000533572 ZNF705AQ6ZN79 300 aaPredicted RBP12.47□□□□□ -0.41
CTSB-229ENST00000533572 TVP23CQ96ET8 276 aa12.47□□□□□ -0.41
CTSB-229ENST00000533572 PYGO2Q9BRQ0 406 aa12.47□□□□□ -0.41
CTSB-229ENST00000533572 PARLQ9H300 379 aa12.47□□□□□ -0.41
CTSB-229ENST00000533572 TRAV12-3A0A0B4J271 114 aa12.46□□□□□ -0.41
CTSB-229ENST00000533572 C1orf158Q8N1D5 194 aa12.46□□□□□ -0.41
CTSB-229ENST00000533572 LINC01587Q99440 93 aa12.46□□□□□ -0.41
CTSB-229ENST00000533572 LINC00467Q9BRT7 94 aa12.46□□□□□ -0.41
CTSB-229ENST00000533572 DERL1Q9BUN8 251 aa12.46□□□□□ -0.41
CTSB-229ENST00000533572 LINC00862A6NCI5 91 aa12.45□□□□□ -0.42
CTSB-229ENST00000533572 FABP5P3A8MUU1 101 aa12.45□□□□□ -0.42
CTSB-229ENST00000533572 ZNF324O75467 553 aaPredicted RBP12.45□□□□□ -0.42
CTSB-229ENST00000533572 GCGP01275 180 aa12.45□□□□□ -0.42
CTSB-229ENST00000533572 PFN1P07737 140 aaKnown RBP12.45□□□□□ -0.42
CTSB-229ENST00000533572 MIFP14174 115 aa12.45□□□□□ -0.42
CTSB-229ENST00000533572 CEBPGP53567 150 aa12.45□□□□□ -0.42
CTSB-229ENST00000533572 BTN1A1Q13410 526 aa12.45□□□□□ -0.42
CTSB-229ENST00000533572 CENPWQ5EE01 88 aa12.45□□□□□ -0.42
CTSB-229ENST00000533572 MLST8Q9BVC4 326 aa12.45□□□□□ -0.42
CTSB-229ENST00000533572 C11orf68Q9H3H3 251 aaKnown RBP12.45□□□□□ -0.42
CTSB-229ENST00000533572 LY96Q9Y6Y9 160 aa12.45□□□□□ -0.42
CTSB-229ENST00000533572 EIF4E3Q8N5X7 224 aaKnown RBP12.44□□□□□ -0.42
CTSB-229ENST00000533572 KCNS1Q96KK3 526 aa12.44□□□□□ -0.42
CTSB-229ENST00000533572 C8orf49Q96NF6 230 aa12.44□□□□□ -0.42
CTSB-229ENST00000533572 SMIM7Q9BQ49 75 aa12.44□□□□□ -0.42
CTSB-229ENST00000533572 IGHV3OR16-12A0A075B7B8 117 aa12.43□□□□□ -0.42
CTSB-229ENST00000533572 NUPR2A6NF83 97 aa12.43□□□□□ -0.42
CTSB-229ENST00000533572 ZNF727A8MUV8 499 aa12.43□□□□□ -0.42
CTSB-229ENST00000533572 KIR3DS1Q14943 382 aa12.43□□□□□ -0.42
CTSB-229ENST00000533572 RRN3P1Q2M238 152 aa12.43□□□□□ -0.42
CTSB-229ENST00000533572 ZNF674Q2M3X9 581 aa12.43□□□□□ -0.42
CTSB-229ENST00000533572 FAM162BQ5T6X4 162 aa12.43□□□□□ -0.42
CTSB-229ENST00000533572 PRR9Q5T870 116 aa12.43□□□□□ -0.42
CTSB-229ENST00000533572 FAM159AQ6UWV7 190 aa12.43□□□□□ -0.42
CTSB-229ENST00000533572 STARD9Q9P2P6 4700 aa12.43□□□□□ -0.42
CTSB-229ENST00000533572 TMEM189A5PLL7 270 aa12.42□□□□□ -0.42
CTSB-229ENST00000533572 SRSF3P84103 164 aaKnown RBP12.42□□□□□ -0.42
CTSB-229ENST00000533572 SOHLH1Q5JUK2 328 aa12.42□□□□□ -0.42
CTSB-229ENST00000533572 ZNF493Q6ZR52 646 aa12.42□□□□□ -0.42
CTSB-229ENST00000533572 ZC2HC1AQ96GY0 325 aa12.42□□□□□ -0.42
CTSB-229ENST00000533572 CSMD3Q7Z407 3707 aa12.41□□□□□ -0.42
CTSB-229ENST00000533572 IGHV1OR15-1A0A075B7D0 117 aa12.41□□□□□ -0.42
CTSB-229ENST00000533572 LCE6AA0A183 80 aa12.41□□□□□ -0.42
CTSB-229ENST00000533572 DEFB4AO15263 64 aa12.41□□□□□ -0.42
CTSB-229ENST00000533572 RBMY1A1P0DJD3 496 aaKnown RBP12.41□□□□□ -0.42
CTSB-229ENST00000533572 RBMY1CP0DJD4 496 aa12.41□□□□□ -0.42
CTSB-229ENST00000533572 RBMY1FQ15415 496 aaKnown RBP12.41□□□□□ -0.42
CTSB-229ENST00000533572 TDRG1Q3Y452 100 aa12.41□□□□□ -0.42
CTSB-229ENST00000533572 ANXA2RQ3ZCQ2 193 aa12.41□□□□□ -0.42
CTSB-229ENST00000533572 COMMD7Q86VX2 200 aa12.41□□□□□ -0.42
CTSB-229ENST00000533572 C11orf45Q8TAV5 145 aa12.41□□□□□ -0.42
CTSB-229ENST00000533572 TENM2Q9NT68 2774 aa12.41□□□□□ -0.42
CTSB-229ENST00000533572 KLK5Q9Y337 293 aaPredicted RBP12.41□□□□□ -0.42
CTSB-229ENST00000533572 X6R8D5 127 aa12.41□□□□□ -0.42
CTSB-229ENST00000533572 TRBV20OR9-2A0A075B6H5 130 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms