RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 KIR3DS1Q14943 382 aa13.85□□□□□ -0.19
PHRF1-205ENST00000533464 Q8N8P6 123 aa13.85□□□□□ -0.19
PHRF1-205ENST00000533464 TP53TG1Q9Y2A0 90 aa13.85□□□□□ -0.19
PHRF1-205ENST00000533464 TMEM86BQ8N661 226 aa13.84□□□□□ -0.19
PHRF1-205ENST00000533464 A8MWV9 139 aa13.84□□□□□ -0.19
PHRF1-205ENST00000533464 PIEZO1Q92508 2521 aa13.84□□□□□ -0.19
PHRF1-205ENST00000533464 IGHV1-24A0A0C4DH33 117 aa13.84□□□□□ -0.19
PHRF1-205ENST00000533464 IGHV1OR15-1A0A075B7D0 117 aa13.84□□□□□ -0.19
PHRF1-205ENST00000533464 LY6G5BQ8NDX9 201 aa13.84□□□□□ -0.19
PHRF1-205ENST00000533464 CHAC1Q9BUX1 264 aa13.84□□□□□ -0.19
PHRF1-205ENST00000533464 C11orf68Q9H3H3 251 aaKnown RBP13.84□□□□□ -0.19
PHRF1-205ENST00000533464 RNF114Q9Y508 228 aa13.84□□□□□ -0.19
PHRF1-205ENST00000533464 C10orf126Q8N4M7 172 aa13.83□□□□□ -0.19
PHRF1-205ENST00000533464 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.83□□□□□ -0.2
PHRF1-205ENST00000533464 CDKN1BP46527 198 aa13.83□□□□□ -0.2
PHRF1-205ENST00000533464 IGLV2-14P01704 120 aa13.83□□□□□ -0.2
PHRF1-205ENST00000533464 TDGF1P3P51864 188 aa13.83□□□□□ -0.2
PHRF1-205ENST00000533464 SIGLEC8Q9NYZ4 499 aa13.83□□□□□ -0.2
PHRF1-205ENST00000533464 WDR87Q6ZQQ6 2873 aa13.83□□□□□ -0.2
PHRF1-205ENST00000533464 CENPVL3A0A0U1RRI6 287 aa13.83□□□□□ -0.2
PHRF1-205ENST00000533464 ESDP10768 282 aa13.83□□□□□ -0.2
PHRF1-205ENST00000533464 IGHV7-4-1A0A0J9YVY3 117 aa13.82□□□□□ -0.2
PHRF1-205ENST00000533464 NPYP01303 97 aa13.82□□□□□ -0.2
PHRF1-205ENST00000533464 RASL10AQ92737 203 aa13.82□□□□□ -0.2
PHRF1-205ENST00000533464 CKS1BP61024 79 aa13.82□□□□□ -0.2
PHRF1-205ENST00000533464 ZNF124Q15973 351 aa13.82□□□□□ -0.2
PHRF1-205ENST00000533464 IGKV1-17P01599 117 aa13.82□□□□□ -0.2
PHRF1-205ENST00000533464 IGHV4-61A0A0C4DH41 118 aa13.82□□□□□ -0.2
PHRF1-205ENST00000533464 SDHAF1A6NFY7 115 aa13.82□□□□□ -0.2
PHRF1-205ENST00000533464 TMEM95Q3KNT9 176 aa13.82□□□□□ -0.2
PHRF1-205ENST00000533464 MORN5Q5VZ52 161 aa13.82□□□□□ -0.2
PHRF1-205ENST00000533464 MRPL52Q86TS9 123 aaKnown RBP13.81□□□□□ -0.2
PHRF1-205ENST00000533464 TIMM21Q9BVV7 248 aa13.81□□□□□ -0.2
PHRF1-205ENST00000533464 OBSL1O75147 1896 aa13.81□□□□□ -0.2
PHRF1-205ENST00000533464 IGHV3-16A0A0C4DH30 117 aa13.81□□□□□ -0.2
PHRF1-205ENST00000533464 IGLC2P0DOY2 106 aa13.81□□□□□ -0.2
PHRF1-205ENST00000533464 IGLC3P0DOY3 106 aa13.81□□□□□ -0.2
PHRF1-205ENST00000533464 DYNAPQ8N1N2 210 aa13.81□□□□□ -0.2
PHRF1-205ENST00000533464 ADAMTS9Q9P2N4 1935 aa13.81□□□□□ -0.2
PHRF1-205ENST00000533464 K7EIM0 57 aa13.81□□□□□ -0.2
PHRF1-205ENST00000533464 RHODO00212 210 aa13.81□□□□□ -0.2
PHRF1-205ENST00000533464 CD5LO43866 347 aa13.81□□□□□ -0.2
PHRF1-205ENST00000533464 IGHV7-81A0A0B4J1V7 117 aa13.8□□□□□ -0.2
PHRF1-205ENST00000533464 IGHV4-59P01825 116 aa13.8□□□□□ -0.2
PHRF1-205ENST00000533464 DEFB112Q30KQ8 113 aa13.8□□□□□ -0.2
PHRF1-205ENST00000533464 AGPAT4-IT1Q9H0P7 198 aa13.8□□□□□ -0.2
PHRF1-205ENST00000533464 I3L2K1 104 aa13.8□□□□□ -0.2
PHRF1-205ENST00000533464 PATE2Q6UY27 113 aa13.8□□□□□ -0.2
PHRF1-205ENST00000533464 SNHG12Q9BXW3 62 aa13.8□□□□□ -0.2
PHRF1-205ENST00000533464 NCOR2Q9Y618 2525 aa13.8□□□□□ -0.2
PHRF1-205ENST00000533464 WNK1Q9H4A3 2382 aa13.8□□□□□ -0.2
PHRF1-205ENST00000533464 MYO18BQ8IUG5 2567 aa13.8□□□□□ -0.2
PHRF1-205ENST00000533464 ADORA2A-AS1P86434 159 aa13.8□□□□□ -0.2
PHRF1-205ENST00000533464 ZNF106Q9H2Y7 1883 aaKnown RBP13.8□□□□□ -0.2
PHRF1-205ENST00000533464 ELANEP08246 267 aa13.8□□□□□ -0.2
PHRF1-205ENST00000533464 PCNX3Q9H6A9 2034 aa13.8□□□□□ -0.2
PHRF1-205ENST00000533464 F6UB75 175 aa13.79□□□□□ -0.2
PHRF1-205ENST00000533464 PAX4O43316 350 aa13.79□□□□□ -0.2
PHRF1-205ENST00000533464 SLC25A20O43772 301 aa13.79□□□□□ -0.2
PHRF1-205ENST00000533464 IGLL1P15814 213 aa13.79□□□□□ -0.2
PHRF1-205ENST00000533464 MTURNQ8N3F0 131 aa13.79□□□□□ -0.2
PHRF1-205ENST00000533464 UBE2V1Q13404 147 aa13.79□□□□□ -0.2
PHRF1-205ENST00000533464 C6orf226Q5I0X4 101 aa13.79□□□□□ -0.2
PHRF1-205ENST00000533464 NEGR1Q7Z3B1 354 aa13.79□□□□□ -0.2
PHRF1-205ENST00000533464 EGR2P11161 476 aaPredicted RBP13.78□□□□□ -0.2
PHRF1-205ENST00000533464 NPBQ8NG41 125 aa13.78□□□□□ -0.2
PHRF1-205ENST00000533464 PGPEP1Q9NXJ5 209 aa13.78□□□□□ -0.2
PHRF1-205ENST00000533464 PRIMA1Q86XR5 153 aa13.78□□□□□ -0.2
PHRF1-205ENST00000533464 GP9P14770 177 aa13.77□□□□□ -0.2
PHRF1-205ENST00000533464 DENND4AQ7Z401 1863 aa13.77□□□□□ -0.2
PHRF1-205ENST00000533464 GAGE12JA6NER3 117 aa13.77□□□□□ -0.2
PHRF1-205ENST00000533464 CFHR3Q02985 330 aa13.77□□□□□ -0.2
PHRF1-205ENST00000533464 GAGE1Q13065 139 aa13.77□□□□□ -0.2
PHRF1-205ENST00000533464 GAGE4Q13068 117 aa13.77□□□□□ -0.2
PHRF1-205ENST00000533464 GAGE5Q13069 117 aa13.77□□□□□ -0.2
PHRF1-205ENST00000533464 MYMXA0A1B0GTQ4 84 aa13.77□□□□□ -0.21
PHRF1-205ENST00000533464 H3BUA1 57 aa13.77□□□□□ -0.21
PHRF1-205ENST00000533464 A0A1B0GV72 72 aa13.77□□□□□ -0.21
PHRF1-205ENST00000533464 ODF3L1Q8IXM7 274 aa13.77□□□□□ -0.21
PHRF1-205ENST00000533464 SMIM2Q9BVW6 85 aa13.77□□□□□ -0.21
PHRF1-205ENST00000533464 PIEZO2Q9H5I5 2752 aa13.77□□□□□ -0.21
PHRF1-205ENST00000533464 IGLV11-55A0A075B6I3 123 aa13.77□□□□□ -0.21
PHRF1-205ENST00000533464 ATXN8Q156A1 80 aa13.77□□□□□ -0.21
PHRF1-205ENST00000533464 I3L3M4 83 aa13.76□□□□□ -0.21
PHRF1-205ENST00000533464 IGLV1-47P01700 117 aa13.76□□□□□ -0.21
PHRF1-205ENST00000533464 PYGO2Q9BRQ0 406 aa13.76□□□□□ -0.21
PHRF1-205ENST00000533464 IGHV4-30-2A0A087WSY4 118 aa13.76□□□□□ -0.21
PHRF1-205ENST00000533464 IGHV4-38-2P0DP08 117 aa13.76□□□□□ -0.21
PHRF1-205ENST00000533464 PMVKQ15126 192 aa13.76□□□□□ -0.21
PHRF1-205ENST00000533464 S100A7L2Q5SY68 101 aa13.76□□□□□ -0.21
PHRF1-205ENST00000533464 FOXE3Q13461 319 aa13.76□□□□□ -0.21
PHRF1-205ENST00000533464 COX11Q9Y6N1 276 aa13.76□□□□□ -0.21
PHRF1-205ENST00000533464 IGKV1OR2-108A0A075B7D4 117 aa13.75□□□□□ -0.21
PHRF1-205ENST00000533464 IGF2RP11717 2491 aa13.75□□□□□ -0.21
PHRF1-205ENST00000533464 CTSGP08311 255 aa13.75□□□□□ -0.21
PHRF1-205ENST00000533464 BLCAPP62952 87 aa13.75□□□□□ -0.21
PHRF1-205ENST00000533464 LGALS9BQ3B8N2 356 aa13.75□□□□□ -0.21
PHRF1-205ENST00000533464 LGALS9CQ6DKI2 356 aa13.75□□□□□ -0.21
PHRF1-205ENST00000533464 PRO3102Q9H379 93 aa13.75□□□□□ -0.21
PHRF1-205ENST00000533464 E7EUB6 86 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 256.7 ms