RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 FAM106AQ4KMX7 169 aa11.53□□□□□ -0.56
SRPRA-206ENST00000532259 C11orf21Q9P2W6 132 aa11.53□□□□□ -0.56
SRPRA-206ENST00000532259 LOC102724200A0A096LPH7 203 aaPredicted RBP11.52□□□□□ -0.56
SRPRA-206ENST00000532259 FABP5P3A8MUU1 101 aa11.52□□□□□ -0.56
SRPRA-206ENST00000532259 PAFAH1B2P68402 229 aa11.52□□□□□ -0.56
SRPRA-206ENST00000532259 BORCS7Q96B45 105 aa11.52□□□□□ -0.56
SRPRA-206ENST00000532259 NRN1Q9NPD7 142 aa11.52□□□□□ -0.56
SRPRA-206ENST00000532259 MSRB1Q9NZV6 116 aa11.52□□□□□ -0.56
SRPRA-206ENST00000532259 ANK3Q12955 4377 aaKnown RBP11.52□□□□□ -0.56
SRPRA-206ENST00000532259 NIPBLQ6KC79 2804 aaeCLIP11.52□□□□□ -0.57
SRPRA-206ENST00000532259 ZNF324O75467 553 aaPredicted RBP11.52□□□□□ -0.57
SRPRA-206ENST00000532259 PRR9Q5T870 116 aa11.52□□□□□ -0.57
SRPRA-206ENST00000532259 ARL6IP6Q8N6S5 226 aa11.52□□□□□ -0.57
SRPRA-206ENST00000532259 DUX3Q96PT4 197 aa11.52□□□□□ -0.57
SRPRA-206ENST00000532259 TIMM8BQ9Y5J9 83 aaPredicted RBP11.52□□□□□ -0.57
SRPRA-206ENST00000532259 IGHV4OR15-8A0A075B7B6 117 aa11.51□□□□□ -0.57
SRPRA-206ENST00000532259 A0A087WW49 117 aa11.51□□□□□ -0.57
SRPRA-206ENST00000532259 HSBP1O75506 76 aa11.51□□□□□ -0.57
SRPRA-206ENST00000532259 HIST1H1AQ02539 215 aaPredicted RBP11.51□□□□□ -0.57
SRPRA-206ENST00000532259 TWIST1Q15672 202 aa11.51□□□□□ -0.57
SRPRA-206ENST00000532259 KHDC1LQ5JSQ8 128 aa11.51□□□□□ -0.57
SRPRA-206ENST00000532259 NIT1Q86X76 327 aa11.51□□□□□ -0.57
SRPRA-206ENST00000532259 FER1L6-AS1Q8NA97 138 aa11.51□□□□□ -0.57
SRPRA-206ENST00000532259 CLEC5AQ9NY25 188 aa11.51□□□□□ -0.57
SRPRA-206ENST00000532259 SMPXQ9UHP9 88 aa11.51□□□□□ -0.57
SRPRA-206ENST00000532259 NAGKQ9UJ70 344 aa11.51□□□□□ -0.57
SRPRA-206ENST00000532259 RBAKDNA6NC62 111 aa11.51□□□□□ -0.57
SRPRA-206ENST00000532259 SOCS3O14543 225 aa11.51□□□□□ -0.57
SRPRA-206ENST00000532259 S100A12P80511 92 aa11.51□□□□□ -0.57
SRPRA-206ENST00000532259 KIR3DS1Q14943 382 aa11.51□□□□□ -0.57
SRPRA-206ENST00000532259 AMN1Q8IY45 258 aa11.51□□□□□ -0.57
SRPRA-206ENST00000532259 ZNF664Q8N3J9 261 aa11.51□□□□□ -0.57
SRPRA-206ENST00000532259 URB1-AS1Q96HZ7 61 aa11.51□□□□□ -0.57
SRPRA-206ENST00000532259 SPRY2O43597 315 aa11.5□□□□□ -0.57
SRPRA-206ENST00000532259 TDRG1Q3Y452 100 aa11.5□□□□□ -0.57
SRPRA-206ENST00000532259 COX8CQ7Z4L0 72 aa11.5□□□□□ -0.57
SRPRA-206ENST00000532259 ZNF580Q9UK33 172 aa11.5□□□□□ -0.57
SRPRA-206ENST00000532259 AGRNO00468 2067 aa11.5□□□□□ -0.57
SRPRA-206ENST00000532259 IGKV3D-20A0A0C4DH25 116 aa11.5□□□□□ -0.57
SRPRA-206ENST00000532259 FBLL1A6NHQ2 334 aaKnown RBP11.5□□□□□ -0.57
SRPRA-206ENST00000532259 KRTAP1-1Q07627 177 aa11.5□□□□□ -0.57
SRPRA-206ENST00000532259 C11orf44Q8N8P7 122 aa11.49□□□□□ -0.57
SRPRA-206ENST00000532259 M0R2Z0 102 aa11.49□□□□□ -0.57
SRPRA-206ENST00000532259 KLF5Q13887 457 aaPredicted RBP11.49□□□□□ -0.57
SRPRA-206ENST00000532259 C9orf47Q6ZRZ4 202 aa11.49□□□□□ -0.57
SRPRA-206ENST00000532259 SMKR1H3BMG3 65 aa11.48□□□□□ -0.57
SRPRA-206ENST00000532259 Q6AWC8 147 aa11.48□□□□□ -0.57
SRPRA-206ENST00000532259 OR10J6PQ8NGY7 276 aa11.48□□□□□ -0.57
SRPRA-206ENST00000532259 LOC389332A0A1B0GUA5 103 aa11.48□□□□□ -0.57
SRPRA-206ENST00000532259 HOXD3P31249 432 aaPredicted RBP11.48□□□□□ -0.57
SRPRA-206ENST00000532259 MRPL53Q96EL3 112 aaKnown RBP11.48□□□□□ -0.57
SRPRA-206ENST00000532259 D6R8Y8 96 aa11.47□□□□□ -0.57
SRPRA-206ENST00000532259 KLHDC1Q8N7A1 406 aa11.47□□□□□ -0.57
SRPRA-206ENST00000532259 ESM1Q9NQ30 184 aa11.47□□□□□ -0.57
SRPRA-206ENST00000532259 NCR2O95944 276 aa11.47□□□□□ -0.57
SRPRA-206ENST00000532259 IGKV3-20P01619 116 aa11.47□□□□□ -0.57
SRPRA-206ENST00000532259 LGALS1P09382 135 aaKnown RBP11.47□□□□□ -0.57
SRPRA-206ENST00000532259 ZNF688P0C7X2 276 aa11.47□□□□□ -0.57
SRPRA-206ENST00000532259 SLURP1P55000 103 aa11.47□□□□□ -0.57
SRPRA-206ENST00000532259 UFC1Q9Y3C8 167 aa11.47□□□□□ -0.57
SRPRA-206ENST00000532259 IGLC6P0CF74 106 aa11.46□□□□□ -0.57
SRPRA-206ENST00000532259 TCTEX1D4Q5JR98 221 aa11.46□□□□□ -0.57
SRPRA-206ENST00000532259 SMR3AQ99954 134 aa11.46□□□□□ -0.57
SRPRA-206ENST00000532259 YAE1D1Q9NRH1 226 aa11.46□□□□□ -0.57
SRPRA-206ENST00000532259 OTOGQ6ZRI0 2925 aa11.46□□□□□ -0.57
SRPRA-206ENST00000532259 TSTD3H0UI37 97 aa11.46□□□□□ -0.58
SRPRA-206ENST00000532259 ELANEP08246 267 aa11.46□□□□□ -0.58
SRPRA-206ENST00000532259 C3orf79P0CE67 100 aa11.46□□□□□ -0.58
SRPRA-206ENST00000532259 PKIAP61925 76 aa11.46□□□□□ -0.58
SRPRA-206ENST00000532259 LINC01559Q495D7 138 aa11.46□□□□□ -0.58
SRPRA-206ENST00000532259 ATOH7Q8N100 152 aa11.46□□□□□ -0.58
SRPRA-206ENST00000532259 MYOZ3Q8TDC0 251 aa11.46□□□□□ -0.58
SRPRA-206ENST00000532259 DNAJC9-AS1A6NH13 148 aa11.45□□□□□ -0.58
SRPRA-206ENST00000532259 RNASE4P34096 147 aaKnown RBP11.45□□□□□ -0.58
SRPRA-206ENST00000532259 RPS20P60866 119 aaKnown RBP11.45□□□□□ -0.58
SRPRA-206ENST00000532259 OR8A1Q8NGG7 326 aa11.45□□□□□ -0.58
SRPRA-206ENST00000532259 OR10AG1Q8NH19 301 aa11.45□□□□□ -0.58
SRPRA-206ENST00000532259 MS4A6AQ9H2W1 248 aa11.45□□□□□ -0.58
SRPRA-206ENST00000532259 GAS8-AS1O95177 125 aa11.45□□□□□ -0.58
SRPRA-206ENST00000532259 CTRLP40313 264 aa11.45□□□□□ -0.58
SRPRA-206ENST00000532259 LINC00173Q6ZV60 143 aa11.45□□□□□ -0.58
SRPRA-206ENST00000532259 PAM16Q9Y3D7 125 aa11.45□□□□□ -0.58
SRPRA-206ENST00000532259 K7EMT4 169 aa11.44□□□□□ -0.58
SRPRA-206ENST00000532259 LINC00614P0C842 121 aa11.44□□□□□ -0.58
SRPRA-206ENST00000532259 PSMG4Q5JS54 123 aa11.44□□□□□ -0.58
SRPRA-206ENST00000532259 ZFAND2AQ8N6M9 145 aa11.44□□□□□ -0.58
SRPRA-206ENST00000532259 DCANP1Q8TF63 244 aa11.44□□□□□ -0.58
SRPRA-206ENST00000532259 UBE2E2Q96LR5 201 aa11.44□□□□□ -0.58
SRPRA-206ENST00000532259 IGHV1-24A0A0C4DH33 117 aa11.44□□□□□ -0.58
SRPRA-206ENST00000532259 TMEM89A2RUT3 159 aa11.44□□□□□ -0.58
SRPRA-206ENST00000532259 H3BVH4 76 aa11.44□□□□□ -0.58
SRPRA-206ENST00000532259 OVOL1O14753 267 aa11.44□□□□□ -0.58
SRPRA-206ENST00000532259 FXYD7P58549 80 aa11.44□□□□□ -0.58
SRPRA-206ENST00000532259 MRPL51Q4U2R6 128 aaKnown RBP11.44□□□□□ -0.58
SRPRA-206ENST00000532259 FAM104BQ5XKR9 115 aa11.44□□□□□ -0.58
SRPRA-206ENST00000532259 EBLN2Q6P2I7 272 aa11.44□□□□□ -0.58
SRPRA-206ENST00000532259 Q8N2B8 174 aa11.44□□□□□ -0.58
SRPRA-206ENST00000532259 DNLZQ5SXM8 178 aa11.43□□□□□ -0.58
SRPRA-206ENST00000532259 Q6ZSV7 163 aa11.43□□□□□ -0.58
SRPRA-206ENST00000532259 HIVEP2P31629 2446 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms