RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 COLCA2A8K830 154 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 GAGE7O76087 117 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 GAGE12FP0CL80 117 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 GAGE12GP0CL81 117 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 GAGE12IP0CL82 117 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 Q0VG73 95 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 ZNF48Q96MX3 618 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-225ENST00000530094 TRAV8-1A0A0A6YYK1 113 aa6.73□□□□□ -1.33
CTNND1-225ENST00000530094 IGHV1-24A0A0C4DH33 117 aa6.73□□□□□ -1.33
CTNND1-225ENST00000530094 GAGE2BQ13066 116 aa6.73□□□□□ -1.33
CTNND1-225ENST00000530094 RHOHQ15669 191 aa6.73□□□□□ -1.33
CTNND1-225ENST00000530094 FAM231DQ6ZW35 169 aa6.73□□□□□ -1.33
CTNND1-225ENST00000530094 A0A0G2JRQ6 117 aa6.73□□□□□ -1.33
CTNND1-225ENST00000530094 SHISA9B4DS77 424 aa6.73□□□□□ -1.33
CTNND1-225ENST00000530094 NDUFS6O75380 124 aaKnown RBP6.73□□□□□ -1.33
CTNND1-225ENST00000530094 HERVK_113P63121 156 aa6.73□□□□□ -1.33
CTNND1-225ENST00000530094 FOXE3Q13461 319 aa6.73□□□□□ -1.33
CTNND1-225ENST00000530094 ZC2HC1BQ5TFG8 222 aa6.73□□□□□ -1.33
CTNND1-225ENST00000530094 ZFAND6Q6FIF0 208 aa6.73□□□□□ -1.33
CTNND1-225ENST00000530094 DUX4L9Q6RFH8 374 aaPredicted RBP6.73□□□□□ -1.33
CTNND1-225ENST00000530094 BOD1L2Q8IYS8 172 aa6.73□□□□□ -1.33
CTNND1-225ENST00000530094 SPANXA1Q9NS26 97 aa6.73□□□□□ -1.33
CTNND1-225ENST00000530094 G3V318 75 aa6.73□□□□□ -1.33
CTNND1-225ENST00000530094 OR11H6Q8NGC7 330 aa6.73□□□□□ -1.33
CTNND1-225ENST00000530094 HOXB4P17483 251 aaPredicted RBP6.73□□□□□ -1.33
CTNND1-225ENST00000530094 ZNRD1Q9P1U0 126 aa6.73□□□□□ -1.33
CTNND1-225ENST00000530094 KLK9Q9UKQ9 250 aa6.73□□□□□ -1.33
CTNND1-225ENST00000530094 SOCS3O14543 225 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 C2orf66Q6UXQ4 117 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 RBAKDNA6NC62 111 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 ZNF114Q8NC26 417 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 PYGO2Q9BRQ0 406 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 IGKV1-6A0A0C4DH72 117 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 C15orf65H3BRN8 121 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 IGHV2-70P01814 119 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 C3orf79P0CE67 100 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 PCP4P48539 62 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 Q6ZRM9 215 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 ZNRF2Q8NHG8 242 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 C20orf78Q9BR46 151 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 LENEPQ9Y5L5 61 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 C22orf46C9J442 243 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 POU2AF1Q16633 256 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 C8orf49Q96NF6 230 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 PRR25Q96S07 402 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 SMKR1H3BMG3 65 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 K7EMI3 77 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 ANXA2RQ3ZCQ2 193 aa6.72□□□□□ -1.33
CTNND1-225ENST00000530094 LINC00205P59089 165 aa6.71□□□□□ -1.33
CTNND1-225ENST00000530094 TRAV8-3A0A0A6YYJ7 113 aa6.71□□□□□ -1.34
CTNND1-225ENST00000530094 CFHR3Q02985 330 aa6.71□□□□□ -1.34
CTNND1-225ENST00000530094 KLF5Q13887 457 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-225ENST00000530094 MLANAQ16655 118 aa6.71□□□□□ -1.34
CTNND1-225ENST00000530094 CEP192Q8TEP8 1941 aa6.71□□□□□ -1.34
CTNND1-225ENST00000530094 TRAV13-2A0A0B4J235 113 aa6.71□□□□□ -1.34
CTNND1-225ENST00000530094 SDHAF1A6NFY7 115 aa6.71□□□□□ -1.34
CTNND1-225ENST00000530094 NOTCH3Q9UM47 2321 aa6.71□□□□□ -1.34
CTNND1-225ENST00000530094 MALRD1Q5VYJ5 2156 aa6.71□□□□□ -1.34
CTNND1-225ENST00000530094 TMEM131Q92545 1883 aa6.71□□□□□ -1.34
CTNND1-225ENST00000530094 TRBV20-1A0A075B6N2 111 aa6.7□□□□□ -1.34
CTNND1-225ENST00000530094 KNCNA6PVL3 124 aa6.7□□□□□ -1.34
CTNND1-225ENST00000530094 HLA-DRB4P13762 266 aa6.7□□□□□ -1.34
CTNND1-225ENST00000530094 WDR86Q86TI4 376 aa6.7□□□□□ -1.34
CTNND1-225ENST00000530094 HLA-DRB4X5D2U9 266 aa6.7□□□□□ -1.34
CTNND1-225ENST00000530094 LOC105371267A0A1B0GV96 52 aa6.7□□□□□ -1.34
CTNND1-225ENST00000530094 CCL24O00175 119 aa6.7□□□□□ -1.34
CTNND1-225ENST00000530094 CGB7P0DN87 165 aa6.7□□□□□ -1.34
CTNND1-225ENST00000530094 GAGE6Q13070 117 aa6.7□□□□□ -1.34
CTNND1-225ENST00000530094 hDV102S1A0JD36 115 aa6.7□□□□□ -1.34
CTNND1-225ENST00000530094 CD5LO43866 347 aa6.7□□□□□ -1.34
CTNND1-225ENST00000530094 MMP23AO75900 390 aa6.7□□□□□ -1.34
CTNND1-225ENST00000530094 SEM1Q6ZVN7 128 aa6.7□□□□□ -1.34
CTNND1-225ENST00000530094 IGHV3-16A0A0C4DH30 117 aa6.7□□□□□ -1.34
CTNND1-225ENST00000530094 UTF1Q5T230 341 aa6.7□□□□□ -1.34
CTNND1-225ENST00000530094 GAGE2AQ6NT46 116 aa6.7□□□□□ -1.34
CTNND1-225ENST00000530094 DEFB112Q30KQ8 113 aa6.69□□□□□ -1.34
CTNND1-225ENST00000530094 CITED2Q99967 270 aaPredicted RBP6.69□□□□□ -1.34
CTNND1-225ENST00000530094 TMEM213A2RRL7 107 aa6.69□□□□□ -1.34
CTNND1-225ENST00000530094 KIR3DS1Q14943 382 aa6.69□□□□□ -1.34
CTNND1-225ENST00000530094 C16orf74Q96GX8 76 aa6.69□□□□□ -1.34
CTNND1-225ENST00000530094 IGHV4-30-2A0A087WSY4 118 aa6.69□□□□□ -1.34
CTNND1-225ENST00000530094 LHBP01229 141 aa6.69□□□□□ -1.34
CTNND1-225ENST00000530094 IGF2BP2-AS1Q96M15 143 aa6.69□□□□□ -1.34
CTNND1-225ENST00000530094 FAM120AOSQ5T036 256 aa6.69□□□□□ -1.34
CTNND1-225ENST00000530094 SMIM27A0A1W2PRY6 76 aa6.68□□□□□ -1.34
CTNND1-225ENST00000530094 IGLC1P0CG04 106 aa6.68□□□□□ -1.34
CTNND1-225ENST00000530094 RSPO1Q2MKA7 263 aaPredicted RBP6.68□□□□□ -1.34
CTNND1-225ENST00000530094 CSPG4Q6UVK1 2322 aa6.68□□□□□ -1.34
CTNND1-225ENST00000530094 PRSS29PA6NIE9 313 aa6.68□□□□□ -1.34
CTNND1-225ENST00000530094 ANGP03950 147 aaKnown RBP6.68□□□□□ -1.34
CTNND1-225ENST00000530094 PRB4P10163 310 aaPredicted RBP6.68□□□□□ -1.34
CTNND1-225ENST00000530094 DAZAP2Q15038 168 aaPredicted RBP6.68□□□□□ -1.34
CTNND1-225ENST00000530094 MRPL51Q4U2R6 128 aaKnown RBP6.68□□□□□ -1.34
CTNND1-225ENST00000530094 RNF138Q8WVD3 245 aa6.68□□□□□ -1.34
CTNND1-225ENST00000530094 DENND4AQ7Z401 1863 aa6.68□□□□□ -1.34
CTNND1-225ENST00000530094 IGHV4-61A0A0C4DH41 118 aa6.68□□□□□ -1.34
CTNND1-225ENST00000530094 TMEM89A2RUT3 159 aa6.68□□□□□ -1.34
CTNND1-225ENST00000530094 ZNF843Q8N446 348 aa6.68□□□□□ -1.34
CTNND1-225ENST00000530094 STPG4Q8N801 248 aa6.68□□□□□ -1.34
CTNND1-225ENST00000530094 NPBQ8NG41 125 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms