RNA–Protein interactions for RNA: ENST00000529846.5

PUM1-220, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-220ENST00000529846 PSG8Q9UQ74 426 aa3.97□□□□□ -1.77
PUM1-220ENST00000529846 TP53TG1Q9Y2A0 90 aa3.97□□□□□ -1.77
PUM1-220ENST00000529846 IGHV3OR16-13A0A075B7E8 117 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 IGHV3-49A0A0A0MS15 119 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 IGHV3-74A0A0B4J1X5 117 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 TRAV8-2A0A0B4J237 113 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 TRAV34A0A0B4J273 112 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 IGHV3-66A0A0C4DH42 116 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 C19orf71A6NCJ1 209 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 FAM231BA6NCW3 169 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 COLCA2A8K830 154 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 NPIPB6E9PJ23 425 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 TYMSP04818 313 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 SNRPCP09234 159 aaKnown RBP3.96□□□□□ -1.78
PUM1-220ENST00000529846 IGHV4-30-4P0DP06 118 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 MGST1P10620 155 aaKnown RBP3.96□□□□□ -1.78
PUM1-220ENST00000529846 RAB5AP20339 215 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 TSPOP30536 169 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 FAM3BP58499 235 aaPredicted RBP3.96□□□□□ -1.78
PUM1-220ENST00000529846 DEFA6Q01524 100 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 COX19Q49B96 90 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 TMEM78Q5T7P6 136 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 Q6AWC8 147 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 C9orf47Q6ZRZ4 202 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 Q6ZWC4 215 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 STHQ8IWL8 128 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 GBGT1Q8N5D6 347 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 ZNF738Q8NE65 137 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 MRAPQ8TCY5 172 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 ODF3Q96PU9 254 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 PYGO2Q9BRQ0 406 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 GFRA4Q9GZZ7 299 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 SAV1Q9H4B6 383 aaPredicted RBP3.96□□□□□ -1.78
PUM1-220ENST00000529846 RPP21Q9H633 154 aaKnown RBP3.96□□□□□ -1.78
PUM1-220ENST00000529846 IL36BQ9NZH7 164 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 V9GYV3 84 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 SORL1Q92673 2214 aa3.96□□□□□ -1.78
PUM1-220ENST00000529846 TRAV8-1A0A0A6YYK1 113 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 A0A1W2PPQ1 181 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 SMIM27A0A1W2PRY6 76 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 IZUMO1RA6ND01 250 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 SMIM9A6NGZ8 99 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 ZNF705GA8MUZ8 300 aaPredicted RBP3.95□□□□□ -1.78
PUM1-220ENST00000529846 A8MWL6 223 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 GATCO43716 136 aaKnown RBP3.95□□□□□ -1.78
PUM1-220ENST00000529846 P01737 135 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 MT-ND6P03923 174 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 PFN1P07737 140 aaKnown RBP3.95□□□□□ -1.78
PUM1-220ENST00000529846 ZNF138P52744 262 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 RPS20P60866 119 aaKnown RBP3.95□□□□□ -1.78
PUM1-220ENST00000529846 FAM162BQ5T6X4 162 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 RASL11AQ6T310 242 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 LINC00322Q6ZN03 302 aaPredicted RBP3.95□□□□□ -1.78
PUM1-220ENST00000529846 PRNTQ86SH4 94 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 FAM24BQ8N5W8 94 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 NHLRC2Q8NBF2 726 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 OR10J6PQ8NGY7 276 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 IL17DQ8TAD2 202 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 TSKUQ8WUA8 353 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 DAZAP1Q96EP5 407 aaKnown RBP3.95□□□□□ -1.78
PUM1-220ENST00000529846 ZC2HC1AQ96GY0 325 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 FAM210BQ96KR6 192 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 LINC00477Q96M19 166 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 LINC00479Q96M42 142 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 PRR25Q96S07 402 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 C20orf144Q9BQM9 153 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 SPATA25Q9BR10 227 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 CSTL1Q9H114 145 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 SRD5A3Q9H8P0 318 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 MAP6D1Q9H9H5 199 aa3.95□□□□□ -1.78
PUM1-220ENST00000529846 MEGF8Q7Z7M0 2845 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 IGKV2-40A0A087WW87 121 aaPredicted RBP3.94□□□□□ -1.78
PUM1-220ENST00000529846 TGIF2-C20orf24A0A0A6YYL0 155 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 XKRY2A2RUG3 117 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 C1orf196B1AJZ1 125 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 K7EIL1 84 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 IGKV2D-40P01614 121 aaPredicted RBP3.94□□□□□ -1.78
PUM1-220ENST00000529846 CXCL1P09341 107 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 CD7P09564 240 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 FRMD6-AS1P0C7T7 363 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 HLA-DRB4P13762 266 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 HLA-DMBP28068 263 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 TFPI2P48307 235 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 DEFB131AP59861 70 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 RAB5BP61020 215 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 HIST1H1AQ02539 215 aaPredicted RBP3.94□□□□□ -1.78
PUM1-220ENST00000529846 OR5I1Q13606 314 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 ODF3L2Q3SX64 289 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 SMUG1Q53HV7 270 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 PSMG4Q5JS54 123 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 PRR27Q6MZM9 219 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 WDR73Q6P4I2 378 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 ATP5L2Q7Z4Y8 100 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 WFDC3Q8IUB2 231 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 APRG1Q8IVJ8 170 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 TMEM256Q8N2U0 113 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 RNF182Q8N6D2 247 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 NUDT10Q8NFP7 164 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 OR8A1Q8NGG7 326 aa3.94□□□□□ -1.78
PUM1-220ENST00000529846 NUDT11Q96G61 164 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms