RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 DEFB112Q30KQ8 113 aa6.42□□□□□ -1.38
CTNND1-220ENST00000529526 CFHR4Q92496 578 aa6.42□□□□□ -1.38
CTNND1-220ENST00000529526 SNHG12Q9BXW3 62 aa6.42□□□□□ -1.38
CTNND1-220ENST00000529526 H3BMM0 161 aa6.42□□□□□ -1.38
CTNND1-220ENST00000529526 K7ERJ3 54 aa6.42□□□□□ -1.38
CTNND1-220ENST00000529526 FAM231DQ6ZW35 169 aa6.42□□□□□ -1.38
CTNND1-220ENST00000529526 C11orf53Q8IXP5 236 aa6.42□□□□□ -1.38
CTNND1-220ENST00000529526 UBE2WQ96B02 151 aa6.42□□□□□ -1.38
CTNND1-220ENST00000529526 RITA1Q96K30 269 aa6.42□□□□□ -1.38
CTNND1-220ENST00000529526 TANC1Q9C0D5 1861 aa6.42□□□□□ -1.38
CTNND1-220ENST00000529526 ZNF491Q8N8L2 437 aa6.41□□□□□ -1.38
CTNND1-220ENST00000529526 IGLL1P15814 213 aa6.41□□□□□ -1.38
CTNND1-220ENST00000529526 FGF23Q9GZV9 251 aaPredicted RBP6.41□□□□□ -1.38
CTNND1-220ENST00000529526 J3QLI3 93 aa6.41□□□□□ -1.38
CTNND1-220ENST00000529526 LTAP01374 205 aa6.41□□□□□ -1.38
CTNND1-220ENST00000529526 IGHV2-5P01817 119 aa6.41□□□□□ -1.38
CTNND1-220ENST00000529526 NKAPP1Q8N9T2 125 aa6.41□□□□□ -1.38
CTNND1-220ENST00000529526 ATP6V0BQ99437 205 aa6.41□□□□□ -1.38
CTNND1-220ENST00000529526 C20orf144Q9BQM9 153 aa6.41□□□□□ -1.38
CTNND1-220ENST00000529526 DKK2Q9UBU2 259 aa6.41□□□□□ -1.38
CTNND1-220ENST00000529526 A0A0J9YY99 117 aa6.41□□□□□ -1.38
CTNND1-220ENST00000529526 IGHV2-70P01814 119 aa6.41□□□□□ -1.38
CTNND1-220ENST00000529526 APOC4P55056 127 aa6.41□□□□□ -1.38
CTNND1-220ENST00000529526 NOP10Q9NPE3 64 aaKnown RBP6.41□□□□□ -1.38
CTNND1-220ENST00000529526 NDUFA12Q9UI09 145 aa6.41□□□□□ -1.38
CTNND1-220ENST00000529526 C10orf91Q5T1B1 145 aa6.4□□□□□ -1.38
CTNND1-220ENST00000529526 C9orf118A6NHY6 69 aa6.4□□□□□ -1.38
CTNND1-220ENST00000529526 J3QKU1 62 aa6.4□□□□□ -1.38
CTNND1-220ENST00000529526 IGLC2P0DOY2 106 aa6.4□□□□□ -1.38
CTNND1-220ENST00000529526 IGLC3P0DOY3 106 aa6.4□□□□□ -1.38
CTNND1-220ENST00000529526 PIP4P1Q86T03 277 aa6.4□□□□□ -1.38
CTNND1-220ENST00000529526 SMIM2Q9BVW6 85 aa6.4□□□□□ -1.38
CTNND1-220ENST00000529526 POLEQ07864 2286 aa6.4□□□□□ -1.38
CTNND1-220ENST00000529526 PI4KAP42356 2102 aa6.4□□□□□ -1.38
CTNND1-220ENST00000529526 ANAPC1Q9H1A4 1944 aa6.4□□□□□ -1.38
CTNND1-220ENST00000529526 IGLC7A0M8Q6 106 aa6.4□□□□□ -1.39
CTNND1-220ENST00000529526 TRAV25A0A0B4J276 109 aa6.4□□□□□ -1.39
CTNND1-220ENST00000529526 FGF6P10767 208 aa6.4□□□□□ -1.39
CTNND1-220ENST00000529526 PRSS29PA6NIE9 313 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 ANGP03950 147 aaKnown RBP6.39□□□□□ -1.39
CTNND1-220ENST00000529526 COX8AP10176 69 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 EGR2P11161 476 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-220ENST00000529526 PRR20EP86478 221 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 PRR20CP86479 221 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 PRR20DP86480 221 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 PRR20BP86481 221 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 PRR20AP86496 221 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 APRG1Q8IVJ8 170 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 CEND1Q8N111 149 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 HEATR5AQ86XA9 2040 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 PRB1P04280 392 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 CGB3P0DN86 165 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 LGALS9BQ3B8N2 356 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 LGALS9CQ6DKI2 356 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 SCRT2Q9NQ03 307 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-220ENST00000529526 IGKV2-29A2NJV5 120 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-220ENST00000529526 SOCS3O14543 225 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 SUMO4Q6EEV6 95 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 DOCK8Q8NF50 2099 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 IGHV4-38-2P0DP08 117 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 HOXD3P31249 432 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-220ENST00000529526 RPL32P62910 135 aaKnown RBP6.39□□□□□ -1.39
CTNND1-220ENST00000529526 TMEM126AQ9H061 195 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 KAAG1Q9UBP8 84 aa6.39□□□□□ -1.39
CTNND1-220ENST00000529526 INTS1Q8N201 2190 aaKnown RBP6.39□□□□□ -1.39
CTNND1-220ENST00000529526 MRPL53Q96EL3 112 aaKnown RBP6.39□□□□□ -1.39
CTNND1-220ENST00000529526 IGLV2-23P01705 113 aa6.38□□□□□ -1.39
CTNND1-220ENST00000529526 GATA1P15976 413 aaPredicted RBP6.38□□□□□ -1.39
CTNND1-220ENST00000529526 SLURP1P55000 103 aa6.38□□□□□ -1.39
CTNND1-220ENST00000529526 Q6ZQT7 251 aa6.38□□□□□ -1.39
CTNND1-220ENST00000529526 CEP250Q9BV73 2442 aa6.38□□□□□ -1.39
CTNND1-220ENST00000529526 BVES-AS1Q5T3Y7 98 aa6.38□□□□□ -1.39
CTNND1-220ENST00000529526 C9orf153Q5TBE3 101 aa6.38□□□□□ -1.39
CTNND1-220ENST00000529526 U3KQE9 123 aa6.38□□□□□ -1.39
CTNND1-220ENST00000529526 AGPAT4-IT1Q9H0P7 198 aa6.38□□□□□ -1.39
CTNND1-220ENST00000529526 AKAP6Q13023 2319 aa6.38□□□□□ -1.39
CTNND1-220ENST00000529526 XCL1P47992 114 aa6.38□□□□□ -1.39
CTNND1-220ENST00000529526 OR11H6Q8NGC7 330 aa6.38□□□□□ -1.39
CTNND1-220ENST00000529526 C11orf52Q96A22 123 aa6.38□□□□□ -1.39
CTNND1-220ENST00000529526 ELANEP08246 267 aa6.38□□□□□ -1.39
CTNND1-220ENST00000529526 NPSP0C0P6 89 aa6.38□□□□□ -1.39
CTNND1-220ENST00000529526 VPREB3Q9UKI3 123 aa6.38□□□□□ -1.39
CTNND1-220ENST00000529526 CRLF1O75462 422 aa6.37□□□□□ -1.39
CTNND1-220ENST00000529526 NRGNQ92686 78 aa6.37□□□□□ -1.39
CTNND1-220ENST00000529526 KLF5Q13887 457 aaPredicted RBP6.37□□□□□ -1.39
CTNND1-220ENST00000529526 FOXI2Q6ZQN5 318 aa6.37□□□□□ -1.39
CTNND1-220ENST00000529526 TSSC4Q9Y5U2 329 aaPredicted RBP6.37□□□□□ -1.39
CTNND1-220ENST00000529526 F8VRH5 84 aa6.37□□□□□ -1.39
CTNND1-220ENST00000529526 J3QQQ9 107 aa6.37□□□□□ -1.39
CTNND1-220ENST00000529526 IGHV4-61A0A0C4DH41 118 aa6.37□□□□□ -1.39
CTNND1-220ENST00000529526 CCL24O00175 119 aa6.37□□□□□ -1.39
CTNND1-220ENST00000529526 LHBP01229 141 aa6.37□□□□□ -1.39
CTNND1-220ENST00000529526 NBL1P41271 181 aa6.37□□□□□ -1.39
CTNND1-220ENST00000529526 PYGO2Q9BRQ0 406 aa6.37□□□□□ -1.39
CTNND1-220ENST00000529526 IGHV4-30-2A0A087WSY4 118 aa6.37□□□□□ -1.39
CTNND1-220ENST00000529526 HERVK_113P63121 156 aa6.37□□□□□ -1.39
CTNND1-220ENST00000529526 POU2AF1Q16633 256 aa6.37□□□□□ -1.39
CTNND1-220ENST00000529526 TRAV12-1A0A0B4J245 112 aa6.36□□□□□ -1.39
CTNND1-220ENST00000529526 RBMY1FQ15415 496 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms