RNA–Protein interactions for RNA: ENST00000529310.5

PCDHA6-203, Transcript of protocadherin alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA6, Length 5,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-203ENST00000529310 HLA-DMBP28068 263 aa12.51□□□□□ -0.41
PCDHA6-203ENST00000529310 HOXD3P31249 432 aaPredicted RBP12.51□□□□□ -0.41
PCDHA6-203ENST00000529310 CEACAM8P31997 349 aaPredicted RBP12.51□□□□□ -0.41
PCDHA6-203ENST00000529310 PYGO2Q9BRQ0 406 aa12.51□□□□□ -0.41
PCDHA6-203ENST00000529310 FER1L5A0AVI2 2057 aa12.51□□□□□ -0.41
PCDHA6-203ENST00000529310 ATP6V0BQ99437 205 aa12.51□□□□□ -0.41
PCDHA6-203ENST00000529310 TRAV13-2A0A0B4J235 113 aa12.51□□□□□ -0.41
PCDHA6-203ENST00000529310 IGHV1-69DA0A0B4J2H0 117 aa12.51□□□□□ -0.41
PCDHA6-203ENST00000529310 IGHV1-69P01742 117 aa12.51□□□□□ -0.41
PCDHA6-203ENST00000529310 GATA3P23771 443 aa12.51□□□□□ -0.41
PCDHA6-203ENST00000529310 GAGE7O76087 117 aa12.5□□□□□ -0.41
PCDHA6-203ENST00000529310 GAGE12FP0CL80 117 aa12.5□□□□□ -0.41
PCDHA6-203ENST00000529310 GAGE12GP0CL81 117 aa12.5□□□□□ -0.41
PCDHA6-203ENST00000529310 GAGE12IP0CL82 117 aa12.5□□□□□ -0.41
PCDHA6-203ENST00000529310 LINC00311Q8N616 119 aa12.5□□□□□ -0.41
PCDHA6-203ENST00000529310 WDR86Q86TI4 376 aa12.5□□□□□ -0.41
PCDHA6-203ENST00000529310 FXYD5Q96DB9 178 aa12.5□□□□□ -0.41
PCDHA6-203ENST00000529310 NDUFS7O75251 213 aa12.5□□□□□ -0.41
PCDHA6-203ENST00000529310 DSCR8Q96T75 97 aa12.5□□□□□ -0.41
PCDHA6-203ENST00000529310 TICRRQ7Z2Z1 1910 aa12.5□□□□□ -0.41
PCDHA6-203ENST00000529310 MYO7BQ6PIF6 2116 aa12.5□□□□□ -0.41
PCDHA6-203ENST00000529310 THAP8Q8NA92 274 aa12.5□□□□□ -0.41
PCDHA6-203ENST00000529310 C20orf78Q9BR46 151 aa12.5□□□□□ -0.41
PCDHA6-203ENST00000529310 WIPF3A6NGB9 483 aa12.49□□□□□ -0.41
PCDHA6-203ENST00000529310 K7EM74 188 aa12.49□□□□□ -0.41
PCDHA6-203ENST00000529310 LOXP28300 417 aaPredicted RBP12.49□□□□□ -0.41
PCDHA6-203ENST00000529310 KLF5Q13887 457 aaPredicted RBP12.49□□□□□ -0.41
PCDHA6-203ENST00000529310 PRR30Q53SZ7 412 aaPredicted RBP12.49□□□□□ -0.41
PCDHA6-203ENST00000529310 DUX4L9Q6RFH8 374 aaPredicted RBP12.49□□□□□ -0.41
PCDHA6-203ENST00000529310 DKK2Q9UBU2 259 aa12.49□□□□□ -0.41
PCDHA6-203ENST00000529310 AMTNQ6UX39 209 aa12.49□□□□□ -0.41
PCDHA6-203ENST00000529310 TPSG1Q9NRR2 321 aa12.49□□□□□ -0.41
PCDHA6-203ENST00000529310 WNK2Q9Y3S1 2297 aa12.49□□□□□ -0.41
PCDHA6-203ENST00000529310 HERVK_113P63121 156 aa12.48□□□□□ -0.41
PCDHA6-203ENST00000529310 E9PQ18 207 aa12.48□□□□□ -0.41
PCDHA6-203ENST00000529310 C12orf74Q32Q52 190 aa12.48□□□□□ -0.41
PCDHA6-203ENST00000529310 C15orf65H3BRN8 121 aa12.48□□□□□ -0.41
PCDHA6-203ENST00000529310 ASPHD1Q5U4P2 390 aa12.48□□□□□ -0.41
PCDHA6-203ENST00000529310 VOPP1Q96AW1 172 aa12.48□□□□□ -0.41
PCDHA6-203ENST00000529310 ABCA4P78363 2273 aa12.48□□□□□ -0.41
PCDHA6-203ENST00000529310 PHF3Q92576 2039 aaKnown RBP12.48□□□□□ -0.41
PCDHA6-203ENST00000529310 TRAV12-1A0A0B4J245 112 aa12.48□□□□□ -0.41
PCDHA6-203ENST00000529310 TCTEX1D4Q5JR98 221 aa12.48□□□□□ -0.41
PCDHA6-203ENST00000529310 IGLC1P0CG04 106 aa12.47□□□□□ -0.41
PCDHA6-203ENST00000529310 ANKRD29Q8N6D5 301 aa12.47□□□□□ -0.41
PCDHA6-203ENST00000529310 HEATR1Q9H583 2144 aaKnown RBP12.47□□□□□ -0.41
PCDHA6-203ENST00000529310 IGHV2-70DA0A0C4DH43 119 aa12.47□□□□□ -0.41
PCDHA6-203ENST00000529310 RNF223E7ERA6 249 aa12.47□□□□□ -0.41
PCDHA6-203ENST00000529310 MRAPQ8TCY5 172 aa12.47□□□□□ -0.41
PCDHA6-203ENST00000529310 IGHG4P01861 327 aa12.47□□□□□ -0.41
PCDHA6-203ENST00000529310 ZNF134P52741 427 aa12.47□□□□□ -0.41
PCDHA6-203ENST00000529310 SRSF2Q01130 221 aaKnown RBP12.47□□□□□ -0.41
PCDHA6-203ENST00000529310 TINCRA0A1B0GVN0 87 aa12.46□□□□□ -0.41
PCDHA6-203ENST00000529310 NTN5Q8WTR8 489 aaPredicted RBP12.46□□□□□ -0.41
PCDHA6-203ENST00000529310 DOCK9Q9BZ29 2069 aa12.46□□□□□ -0.41
PCDHA6-203ENST00000529310 LTAP01374 205 aa12.46□□□□□ -0.41
PCDHA6-203ENST00000529310 K7EN84 100 aa12.45□□□□□ -0.42
PCDHA6-203ENST00000529310 PRR20EP86478 221 aa12.45□□□□□ -0.42
PCDHA6-203ENST00000529310 PRR20CP86479 221 aa12.45□□□□□ -0.42
PCDHA6-203ENST00000529310 PRR20DP86480 221 aa12.45□□□□□ -0.42
PCDHA6-203ENST00000529310 PRR20BP86481 221 aa12.45□□□□□ -0.42
PCDHA6-203ENST00000529310 PRR20AP86496 221 aa12.45□□□□□ -0.42
PCDHA6-203ENST00000529310 PRSS29PA6NIE9 313 aa12.45□□□□□ -0.42
PCDHA6-203ENST00000529310 CRYBA4P53673 196 aa12.45□□□□□ -0.42
PCDHA6-203ENST00000529310 DOCK11Q5JSL3 2073 aa12.45□□□□□ -0.42
PCDHA6-203ENST00000529310 C15orf53Q8NAA6 179 aa12.45□□□□□ -0.42
PCDHA6-203ENST00000529310 ZNF747Q9BV97 191 aa12.45□□□□□ -0.42
PCDHA6-203ENST00000529310 NBASA2RRP1 2371 aa12.45□□□□□ -0.42
PCDHA6-203ENST00000529310 CACNA1HO95180 2353 aa12.45□□□□□ -0.42
PCDHA6-203ENST00000529310 IGLV3-9A0A075B6K5 115 aa12.45□□□□□ -0.42
PCDHA6-203ENST00000529310 SPTAN1Q13813 2472 aaKnown RBP12.44□□□□□ -0.42
PCDHA6-203ENST00000529310 BOD1L2Q8IYS8 172 aa12.44□□□□□ -0.42
PCDHA6-203ENST00000529310 IGLC7A0M8Q6 106 aa12.44□□□□□ -0.42
PCDHA6-203ENST00000529310 WISP1O95388 367 aa12.44□□□□□ -0.42
PCDHA6-203ENST00000529310 CFC1BP0CG36 223 aa12.44□□□□□ -0.42
PCDHA6-203ENST00000529310 CFC1P0CG37 223 aa12.44□□□□□ -0.42
PCDHA6-203ENST00000529310 RNASE13Q5GAN3 156 aaKnown RBP12.43□□□□□ -0.42
PCDHA6-203ENST00000529310 ZNF503-AS2A6NEH8 195 aa12.43□□□□□ -0.42
PCDHA6-203ENST00000529310 CCL25O15444 150 aa12.43□□□□□ -0.42
PCDHA6-203ENST00000529310 WIPF2Q8TF74 440 aaPredicted RBP12.43□□□□□ -0.42
PCDHA6-203ENST00000529310 PROK2Q9HC23 129 aa12.43□□□□□ -0.42
PCDHA6-203ENST00000529310 IGHV7-4-1A0A0J9YVY3 117 aa12.43□□□□□ -0.42
PCDHA6-203ENST00000529310 DIAPH2-AS1Q14236 149 aa12.43□□□□□ -0.42
PCDHA6-203ENST00000529310 FAM120AOSQ5T036 256 aa12.43□□□□□ -0.42
PCDHA6-203ENST00000529310 ZNF493Q6ZR52 646 aa12.43□□□□□ -0.42
PCDHA6-203ENST00000529310 ZNF491Q8N8L2 437 aa12.43□□□□□ -0.42
PCDHA6-203ENST00000529310 PKDREJQ9NTG1 2253 aa12.42□□□□□ -0.42
PCDHA6-203ENST00000529310 RSPO1Q2MKA7 263 aaPredicted RBP12.42□□□□□ -0.42
PCDHA6-203ENST00000529310 C3orf56Q8N813 242 aa12.42□□□□□ -0.42
PCDHA6-203ENST00000529310 CFHR4Q92496 578 aa12.42□□□□□ -0.42
PCDHA6-203ENST00000529310 IL15RAQ13261 267 aa12.42□□□□□ -0.42
PCDHA6-203ENST00000529310 POU2AF1Q16633 256 aa12.41□□□□□ -0.42
PCDHA6-203ENST00000529310 MAPK1IP1LQ8NDC0 245 aa12.41□□□□□ -0.42
PCDHA6-203ENST00000529310 MRPL53Q96EL3 112 aaKnown RBP12.41□□□□□ -0.42
PCDHA6-203ENST00000529310 NOTCH3Q9UM47 2321 aa12.41□□□□□ -0.42
PCDHA6-203ENST00000529310 CRYGCP07315 174 aa12.41□□□□□ -0.42
PCDHA6-203ENST00000529310 ANGP03950 147 aaKnown RBP12.41□□□□□ -0.42
PCDHA6-203ENST00000529310 C17orf77Q96MU5 243 aa12.41□□□□□ -0.42
PCDHA6-203ENST00000529310 LYPD6BQ8NI32 183 aa12.4□□□□□ -0.42
PCDHA6-203ENST00000529310 PCP2Q8IVA1 136 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms