RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 Q6AWC8 147 aa13.19□□□□□ -0.3
PCDHA6-202ENST00000527624 PEF1Q9UBV8 284 aaKnown RBP13.19□□□□□ -0.3
PCDHA6-202ENST00000527624 FBLL1A6NHQ2 334 aaKnown RBP13.18□□□□□ -0.3
PCDHA6-202ENST00000527624 IGLC3P0DOY3 106 aa13.18□□□□□ -0.3
PCDHA6-202ENST00000527624 ATOH7Q8N100 152 aa13.18□□□□□ -0.3
PCDHA6-202ENST00000527624 GATD1Q8NB37 220 aa13.18□□□□□ -0.3
PCDHA6-202ENST00000527624 ZNF702PQ9H963 129 aa13.18□□□□□ -0.3
PCDHA6-202ENST00000527624 A0A1B0GW15 77 aa13.17□□□□□ -0.3
PCDHA6-202ENST00000527624 RPLP1P05386 114 aaKnown RBP13.17□□□□□ -0.3
PCDHA6-202ENST00000527624 RPL11P62913 178 aaKnown RBP13.17□□□□□ -0.3
PCDHA6-202ENST00000527624 SONP18583 2426 aaKnown RBP13.17□□□□□ -0.3
PCDHA6-202ENST00000527624 IGHV1-24A0A0C4DH33 117 aa13.17□□□□□ -0.3
PCDHA6-202ENST00000527624 TMEM189A5PLL7 270 aa13.17□□□□□ -0.3
PCDHA6-202ENST00000527624 EDN2P20800 178 aa13.17□□□□□ -0.3
PCDHA6-202ENST00000527624 COX8CQ7Z4L0 72 aa13.17□□□□□ -0.3
PCDHA6-202ENST00000527624 GPHB5Q86YW7 130 aa13.17□□□□□ -0.3
PCDHA6-202ENST00000527624 CLEC5AQ9NY25 188 aa13.17□□□□□ -0.3
PCDHA6-202ENST00000527624 UQCR10Q9UDW1 63 aa13.17□□□□□ -0.3
PCDHA6-202ENST00000527624 IGKV3-7A0A075B6H7 116 aa13.16□□□□□ -0.3
PCDHA6-202ENST00000527624 TMEM70Q9BUB7 260 aa13.16□□□□□ -0.3
PCDHA6-202ENST00000527624 AGPAT4-IT1Q9H0P7 198 aa13.16□□□□□ -0.3
PCDHA6-202ENST00000527624 FLNAP21333 2647 aaKnown RBP13.16□□□□□ -0.3
PCDHA6-202ENST00000527624 TCAPO15273 167 aa13.16□□□□□ -0.3
PCDHA6-202ENST00000527624 DMRTA1Q5VZB9 504 aa13.16□□□□□ -0.3
PCDHA6-202ENST00000527624 KLHDC1Q8N7A1 406 aa13.16□□□□□ -0.3
PCDHA6-202ENST00000527624 C20orf173Q96LM9 149 aa13.16□□□□□ -0.3
PCDHA6-202ENST00000527624 RHPN1-AS1Q9BWJ2 59 aa13.16□□□□□ -0.3
PCDHA6-202ENST00000527624 DAZ1Q9NQZ3 744 aaKnown RBP13.16□□□□□ -0.3
PCDHA6-202ENST00000527624 RBAKDNA6NC62 111 aa13.15□□□□□ -0.3
PCDHA6-202ENST00000527624 CRXO43186 299 aaPredicted RBP13.15□□□□□ -0.3
PCDHA6-202ENST00000527624 MAJINQ3KP22 176 aa13.15□□□□□ -0.3
PCDHA6-202ENST00000527624 IGHV7-4-1A0A0J9YVY3 117 aa13.15□□□□□ -0.31
PCDHA6-202ENST00000527624 TRAV9-2A0A087WT02 112 aa13.14□□□□□ -0.31
PCDHA6-202ENST00000527624 LEPROTL1O95214 131 aa13.14□□□□□ -0.31
PCDHA6-202ENST00000527624 SPATA12Q7Z6I5 190 aa13.14□□□□□ -0.31
PCDHA6-202ENST00000527624 ZNF738Q8NE65 137 aa13.14□□□□□ -0.31
PCDHA6-202ENST00000527624 MRPL53Q96EL3 112 aaKnown RBP13.14□□□□□ -0.31
PCDHA6-202ENST00000527624 MUC21A0A0G2JKD1 596 aa13.13□□□□□ -0.31
PCDHA6-202ENST00000527624 MUC21A0A140T8X8 626 aa13.13□□□□□ -0.31
PCDHA6-202ENST00000527624 ZNF138P52744 262 aa13.13□□□□□ -0.31
PCDHA6-202ENST00000527624 FAM106AQ4KMX7 169 aa13.13□□□□□ -0.31
PCDHA6-202ENST00000527624 MUC21Q5SSG8 566 aa13.13□□□□□ -0.31
PCDHA6-202ENST00000527624 TMEM78Q5T7P6 136 aa13.13□□□□□ -0.31
PCDHA6-202ENST00000527624 ZNF493Q6ZR52 646 aa13.13□□□□□ -0.31
PCDHA6-202ENST00000527624 SRD5A1P18405 259 aa13.13□□□□□ -0.31
PCDHA6-202ENST00000527624 BMI1P35226 326 aa13.13□□□□□ -0.31
PCDHA6-202ENST00000527624 DEFB1P60022 68 aa13.13□□□□□ -0.31
PCDHA6-202ENST00000527624 LYZL1Q6UWQ5 148 aa13.13□□□□□ -0.31
PCDHA6-202ENST00000527624 LINC00173Q6ZV60 143 aa13.13□□□□□ -0.31
PCDHA6-202ENST00000527624 ITPR2Q14571 2701 aa13.12□□□□□ -0.31
PCDHA6-202ENST00000527624 TMEM89A2RUT3 159 aa13.12□□□□□ -0.31
PCDHA6-202ENST00000527624 ORM1P02763 201 aa13.12□□□□□ -0.31
PCDHA6-202ENST00000527624 OR5AL1P0C617 328 aa13.12□□□□□ -0.31
PCDHA6-202ENST00000527624 Q6ZN92 141 aa13.12□□□□□ -0.31
PCDHA6-202ENST00000527624 MYO9AB2RTY4 2548 aa13.12□□□□□ -0.31
PCDHA6-202ENST00000527624 PDZD2O15018 2839 aa13.12□□□□□ -0.31
PCDHA6-202ENST00000527624 C20orf202A1L168 122 aa13.12□□□□□ -0.31
PCDHA6-202ENST00000527624 SYS1-DBNDD2H3BUS1 97 aa13.12□□□□□ -0.31
PCDHA6-202ENST00000527624 SOCS3O14543 225 aa13.12□□□□□ -0.31
PCDHA6-202ENST00000527624 SMPXQ9UHP9 88 aa13.12□□□□□ -0.31
PCDHA6-202ENST00000527624 GCN1Q92616 2671 aaKnown RBP13.12□□□□□ -0.31
PCDHA6-202ENST00000527624 CSN3P07498 182 aa13.11□□□□□ -0.31
PCDHA6-202ENST00000527624 FOXE3Q13461 319 aa13.11□□□□□ -0.31
PCDHA6-202ENST00000527624 UNC79Q9P2D8 2635 aa13.11□□□□□ -0.31
PCDHA6-202ENST00000527624 FABP5P3A8MUU1 101 aa13.11□□□□□ -0.31
PCDHA6-202ENST00000527624 C9orf47Q6ZRZ4 202 aa13.11□□□□□ -0.31
PCDHA6-202ENST00000527624 IGLL1P15814 213 aa13.1□□□□□ -0.31
PCDHA6-202ENST00000527624 HNRNPA3P51991 378 aaKnown RBP13.1□□□□□ -0.31
PCDHA6-202ENST00000527624 BATFQ16520 125 aa13.1□□□□□ -0.31
PCDHA6-202ENST00000527624 TMEM213A2RRL7 107 aa13.09□□□□□ -0.31
PCDHA6-202ENST00000527624 ELANEP08246 267 aa13.09□□□□□ -0.31
PCDHA6-202ENST00000527624 ZNF575Q86XF7 245 aa13.09□□□□□ -0.31
PCDHA6-202ENST00000527624 AP5S1Q9NUS5 200 aa13.09□□□□□ -0.31
PCDHA6-202ENST00000527624 OR4C46A6NHA9 309 aa13.09□□□□□ -0.31
PCDHA6-202ENST00000527624 K7EMT4 169 aa13.09□□□□□ -0.31
PCDHA6-202ENST00000527624 FASNP49327 2511 aaKnown RBP13.08□□□□□ -0.31
PCDHA6-202ENST00000527624 LGALS1P09382 135 aaKnown RBP13.08□□□□□ -0.32
PCDHA6-202ENST00000527624 Q6ZQT7 251 aa13.08□□□□□ -0.32
PCDHA6-202ENST00000527624 FER1L6-AS1Q8NA97 138 aa13.08□□□□□ -0.32
PCDHA6-202ENST00000527624 MYOZ3Q8TDC0 251 aa13.08□□□□□ -0.32
PCDHA6-202ENST00000527624 UFC1Q9Y3C8 167 aa13.08□□□□□ -0.32
PCDHA6-202ENST00000527624 ACANP16112 2415 aa13.08□□□□□ -0.32
PCDHA6-202ENST00000527624 IGHV4OR15-8A0A075B7B6 117 aa13.08□□□□□ -0.32
PCDHA6-202ENST00000527624 A0A087WW49 117 aa13.08□□□□□ -0.32
PCDHA6-202ENST00000527624 F6UB75 175 aa13.08□□□□□ -0.32
PCDHA6-202ENST00000527624 J3KRW8 73 aa13.08□□□□□ -0.32
PCDHA6-202ENST00000527624 TSPOP30536 169 aa13.08□□□□□ -0.32
PCDHA6-202ENST00000527624 SYNJ2BPP57105 145 aa13.08□□□□□ -0.32
PCDHA6-202ENST00000527624 RPS20P60866 119 aaKnown RBP13.08□□□□□ -0.32
PCDHA6-202ENST00000527624 FAM104BQ5XKR9 115 aa13.08□□□□□ -0.32
PCDHA6-202ENST00000527624 C11orf21Q9P2W6 132 aa13.08□□□□□ -0.32
PCDHA6-202ENST00000527624 HSPB8Q9UJY1 196 aa13.08□□□□□ -0.32
PCDHA6-202ENST00000527624 WFDC3Q8IUB2 231 aa13.07□□□□□ -0.32
PCDHA6-202ENST00000527624 MAP1LC3CQ9BXW4 147 aa13.07□□□□□ -0.32
PCDHA6-202ENST00000527624 LAMTOR2Q9Y2Q5 125 aa13.07□□□□□ -0.32
PCDHA6-202ENST00000527624 COL5A1-AS1Q5SY13 56 aa13.07□□□□□ -0.32
PCDHA6-202ENST00000527624 AMN1Q8IY45 258 aa13.07□□□□□ -0.32
PCDHA6-202ENST00000527624 OR10J6PQ8NGY7 276 aa13.07□□□□□ -0.32
PCDHA6-202ENST00000527624 PRSS3P2Q8NHM4 247 aa13.07□□□□□ -0.32
PCDHA6-202ENST00000527624 UBE2E2Q96LR5 201 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms