RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 C20orf173Q96LM9 149 aa13.42□□□□□ -0.26
USH1C-205ENST00000527020 DLEU1O43261 78 aa13.42□□□□□ -0.26
USH1C-205ENST00000527020 TMEM78Q5T7P6 136 aa13.42□□□□□ -0.26
USH1C-205ENST00000527020 PRSS57Q6UWY2 283 aa13.42□□□□□ -0.26
USH1C-205ENST00000527020 Q6ZS46 218 aa13.42□□□□□ -0.26
USH1C-205ENST00000527020 GPHB5Q86YW7 130 aa13.42□□□□□ -0.26
USH1C-205ENST00000527020 HIF1ANQ9NWT6 349 aa13.42□□□□□ -0.26
USH1C-205ENST00000527020 BRI3O95415 125 aa13.41□□□□□ -0.26
USH1C-205ENST00000527020 MSMBP08118 114 aa13.41□□□□□ -0.26
USH1C-205ENST00000527020 FXYD7P58549 80 aa13.41□□□□□ -0.26
USH1C-205ENST00000527020 SCRT2Q9NQ03 307 aa13.41□□□□□ -0.26
USH1C-205ENST00000527020 PPP1R14DQ9NXH3 145 aa13.41□□□□□ -0.26
USH1C-205ENST00000527020 BLCAPP62952 87 aa13.41□□□□□ -0.26
USH1C-205ENST00000527020 KLK15Q9H2R5 256 aa13.41□□□□□ -0.26
USH1C-205ENST00000527020 NDUFA4O00483 81 aa13.4□□□□□ -0.26
USH1C-205ENST00000527020 AVPP01185 164 aa13.4□□□□□ -0.26
USH1C-205ENST00000527020 FOXE3Q13461 319 aa13.4□□□□□ -0.26
USH1C-205ENST00000527020 C16orf92Q96LL3 132 aa13.4□□□□□ -0.26
USH1C-205ENST00000527020 IGHV7-4-1A0A0J9YVY3 117 aa13.39□□□□□ -0.27
USH1C-205ENST00000527020 GAGE1Q13065 139 aa13.39□□□□□ -0.27
USH1C-205ENST00000527020 HSBP1L1C9JCN9 74 aa13.39□□□□□ -0.27
USH1C-205ENST00000527020 H3BUA1 57 aa13.39□□□□□ -0.27
USH1C-205ENST00000527020 PRR9Q5T870 116 aa13.39□□□□□ -0.27
USH1C-205ENST00000527020 C9orf139Q6ZV77 190 aa13.39□□□□□ -0.27
USH1C-205ENST00000527020 OR8A1Q8NGG7 326 aa13.39□□□□□ -0.27
USH1C-205ENST00000527020 MS4A6AQ9H2W1 248 aa13.39□□□□□ -0.27
USH1C-205ENST00000527020 SOCS3O14543 225 aa13.38□□□□□ -0.27
USH1C-205ENST00000527020 TCF21O43680 179 aa13.38□□□□□ -0.27
USH1C-205ENST00000527020 IGHV3-11P01762 117 aa13.38□□□□□ -0.27
USH1C-205ENST00000527020 HBDP02042 147 aa13.38□□□□□ -0.27
USH1C-205ENST00000527020 NPSP0C0P6 89 aa13.38□□□□□ -0.27
USH1C-205ENST00000527020 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.38□□□□□ -0.27
USH1C-205ENST00000527020 LINC01546A6NGU7 62 aa13.38□□□□□ -0.27
USH1C-205ENST00000527020 LCNL1Q6ZST4 164 aa13.38□□□□□ -0.27
USH1C-205ENST00000527020 USMG5Q96IX5 58 aa13.38□□□□□ -0.27
USH1C-205ENST00000527020 PPBPP02775 128 aa13.37□□□□□ -0.27
USH1C-205ENST00000527020 SLC25A34Q6PIV7 304 aa13.37□□□□□ -0.27
USH1C-205ENST00000527020 NRGNQ92686 78 aa13.37□□□□□ -0.27
USH1C-205ENST00000527020 GATA1P15976 413 aaPredicted RBP13.37□□□□□ -0.27
USH1C-205ENST00000527020 IGLV1-40P01703 118 aa13.36□□□□□ -0.27
USH1C-205ENST00000527020 ZNF738Q8NE65 137 aa13.36□□□□□ -0.27
USH1C-205ENST00000527020 CSMD2Q7Z408 3487 aa13.36□□□□□ -0.27
USH1C-205ENST00000527020 TNFRSF6BO95407 300 aa13.35□□□□□ -0.27
USH1C-205ENST00000527020 PF4V1P10720 104 aa13.35□□□□□ -0.27
USH1C-205ENST00000527020 OR4X2Q8NGF9 303 aa13.35□□□□□ -0.27
USH1C-205ENST00000527020 MAP1LC3AQ9H492 121 aa13.35□□□□□ -0.27
USH1C-205ENST00000527020 EVI2AP22794 236 aa13.35□□□□□ -0.27
USH1C-205ENST00000527020 DEFB1P60022 68 aa13.35□□□□□ -0.27
USH1C-205ENST00000527020 CFHR3Q02985 330 aa13.35□□□□□ -0.27
USH1C-205ENST00000527020 LGALS9BQ3B8N2 356 aa13.35□□□□□ -0.27
USH1C-205ENST00000527020 LGALS9CQ6DKI2 356 aa13.35□□□□□ -0.27
USH1C-205ENST00000527020 Q6ZVH6 145 aa13.35□□□□□ -0.27
USH1C-205ENST00000527020 NPFFR1Q9GZQ6 430 aa13.35□□□□□ -0.27
USH1C-205ENST00000527020 GOLT1BQ9Y3E0 138 aa13.35□□□□□ -0.27
USH1C-205ENST00000527020 ZNF124Q15973 351 aa13.34□□□□□ -0.27
USH1C-205ENST00000527020 MPV17L2Q567V2 206 aa13.34□□□□□ -0.27
USH1C-205ENST00000527020 LENEPQ9Y5L5 61 aa13.34□□□□□ -0.27
USH1C-205ENST00000527020 TMEM8BA6NDV4 472 aa13.34□□□□□ -0.27
USH1C-205ENST00000527020 B4DSR2 109 aa13.34□□□□□ -0.27
USH1C-205ENST00000527020 SNAI2O43623 268 aa13.34□□□□□ -0.27
USH1C-205ENST00000527020 CACNG7P62955 275 aa13.34□□□□□ -0.27
USH1C-205ENST00000527020 ZFAND2AQ8N6M9 145 aa13.34□□□□□ -0.27
USH1C-205ENST00000527020 IFI27L1Q96BM0 104 aa13.34□□□□□ -0.27
USH1C-205ENST00000527020 CSPG4Q6UVK1 2322 aa13.33□□□□□ -0.28
USH1C-205ENST00000527020 SPOCK3Q9BQ16 436 aa13.33□□□□□ -0.28
USH1C-205ENST00000527020 IGHV4-4A0A075B6R2 117 aa13.32□□□□□ -0.28
USH1C-205ENST00000527020 COX8AP10176 69 aa13.32□□□□□ -0.28
USH1C-205ENST00000527020 ANKRD39Q53RE8 183 aa13.32□□□□□ -0.28
USH1C-205ENST00000527020 LINC00477Q96M19 166 aa13.32□□□□□ -0.28
USH1C-205ENST00000527020 FBN2P35556 2912 aa13.32□□□□□ -0.28
USH1C-205ENST00000527020 IGLV2-18A0A075B6J9 118 aa13.31□□□□□ -0.28
USH1C-205ENST00000527020 TMEM95Q3KNT9 176 aa13.31□□□□□ -0.28
USH1C-205ENST00000527020 TM4SF20Q53R12 229 aa13.31□□□□□ -0.28
USH1C-205ENST00000527020 WFDC3Q8IUB2 231 aa13.31□□□□□ -0.28
USH1C-205ENST00000527020 MYO18BQ8IUG5 2567 aa13.31□□□□□ -0.28
USH1C-205ENST00000527020 ACACBO00763 2458 aa13.31□□□□□ -0.28
USH1C-205ENST00000527020 J3KRW8 73 aa13.31□□□□□ -0.28
USH1C-205ENST00000527020 OVOL1O14753 267 aa13.31□□□□□ -0.28
USH1C-205ENST00000527020 C2orf91Q6ZV80 131 aa13.31□□□□□ -0.28
USH1C-205ENST00000527020 DPF1Q92782 380 aa13.31□□□□□ -0.28
USH1C-205ENST00000527020 NXT2Q9NPJ8 142 aaKnown RBP13.31□□□□□ -0.28
USH1C-205ENST00000527020 H3BVH4 76 aa13.3□□□□□ -0.28
USH1C-205ENST00000527020 NUDT3O95989 172 aa13.3□□□□□ -0.28
USH1C-205ENST00000527020 FGF6P10767 208 aa13.3□□□□□ -0.28
USH1C-205ENST00000527020 EDN2P20800 178 aa13.3□□□□□ -0.28
USH1C-205ENST00000527020 BVES-AS1Q5T3Y7 98 aa13.3□□□□□ -0.28
USH1C-205ENST00000527020 NRACQ8N912 160 aa13.3□□□□□ -0.28
USH1C-205ENST00000527020 OR10J6PQ8NGY7 276 aa13.3□□□□□ -0.28
USH1C-205ENST00000527020 ORAOV1Q8WV07 137 aa13.3□□□□□ -0.28
USH1C-205ENST00000527020 FAM19A4Q96LR4 140 aa13.3□□□□□ -0.28
USH1C-205ENST00000527020 COX11Q9Y6N1 276 aa13.3□□□□□ -0.28
USH1C-205ENST00000527020 A0A0G2JLM5 398 aa13.3□□□□□ -0.28
USH1C-205ENST00000527020 FCER1GP30273 86 aa13.3□□□□□ -0.28
USH1C-205ENST00000527020 LEPP41159 167 aa13.3□□□□□ -0.28
USH1C-205ENST00000527020 OR2K2Q8NGT1 345 aa13.3□□□□□ -0.28
USH1C-205ENST00000527020 RHPN1-AS1Q9BWJ2 59 aa13.3□□□□□ -0.28
USH1C-205ENST00000527020 SELENOKQ9Y6D0 94 aa13.3□□□□□ -0.28
USH1C-205ENST00000527020 ZANQ9Y493 2812 aa13.29□□□□□ -0.28
USH1C-205ENST00000527020 A0A096LNT2 108 aa13.29□□□□□ -0.28
USH1C-205ENST00000527020 TRAV26-2A0A0B4J265 109 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms