RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 OR10G4Q8NGN3 311 aa12.93□□□□□ -0.34
CAPN1-203ENST00000525013 OR10G9Q8NGN4 311 aa12.93□□□□□ -0.34
CAPN1-203ENST00000525013 OR10G7Q8NGN6 311 aa12.93□□□□□ -0.34
CAPN1-203ENST00000525013 ZNRF2Q8NHG8 242 aa12.93□□□□□ -0.34
CAPN1-203ENST00000525013 OTORQ9NRC9 128 aa12.93□□□□□ -0.34
CAPN1-203ENST00000525013 FAT2Q9NYQ8 4349 aa12.93□□□□□ -0.34
CAPN1-203ENST00000525013 A0A1B0GVY2 172 aa12.92□□□□□ -0.34
CAPN1-203ENST00000525013 ZNF266Q14584 549 aa12.92□□□□□ -0.34
CAPN1-203ENST00000525013 FAM74A1Q5RGS3 127 aa12.92□□□□□ -0.34
CAPN1-203ENST00000525013 MUC21Q5SSG8 566 aa12.92□□□□□ -0.34
CAPN1-203ENST00000525013 NBDYA0A0U1RRE5 68 aa12.91□□□□□ -0.34
CAPN1-203ENST00000525013 SPINK4O60575 86 aa12.91□□□□□ -0.34
CAPN1-203ENST00000525013 IBA57Q5T440 356 aaKnown RBP12.91□□□□□ -0.34
CAPN1-203ENST00000525013 AQP10Q96PS8 301 aa12.91□□□□□ -0.34
CAPN1-203ENST00000525013 H3BNG1 76 aa12.9□□□□□ -0.34
CAPN1-203ENST00000525013 Q5BKY6 102 aa12.9□□□□□ -0.34
CAPN1-203ENST00000525013 MRPL16Q9NX20 251 aaKnown RBP12.9□□□□□ -0.34
CAPN1-203ENST00000525013 LENEPQ9Y5L5 61 aa12.9□□□□□ -0.34
CAPN1-203ENST00000525013 IGHV3-53P01767 116 aa12.89□□□□□ -0.35
CAPN1-203ENST00000525013 GIPP09681 153 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-203ENST00000525013 ARL14EPLP0DKL9 152 aa12.89□□□□□ -0.35
CAPN1-203ENST00000525013 CDC34P49427 236 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-203ENST00000525013 ZNF415Q09FC8 603 aa12.89□□□□□ -0.35
CAPN1-203ENST00000525013 GOLT1AQ6ZVE7 132 aa12.89□□□□□ -0.35
CAPN1-203ENST00000525013 INO80EQ8NBZ0 244 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-203ENST00000525013 C18orf15Q96N68 181 aa12.89□□□□□ -0.35
CAPN1-203ENST00000525013 ATP6V0CP27449 155 aa12.88□□□□□ -0.35
CAPN1-203ENST00000525013 FAM159AQ6UWV7 190 aa12.88□□□□□ -0.35
CAPN1-203ENST00000525013 OR2G3Q8NGZ4 309 aa12.88□□□□□ -0.35
CAPN1-203ENST00000525013 TMED6Q8WW62 240 aa12.88□□□□□ -0.35
CAPN1-203ENST00000525013 PSMG3Q9BT73 122 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-203ENST00000525013 Q9H8V8 135 aa12.88□□□□□ -0.35
CAPN1-203ENST00000525013 NAGKQ9UJ70 344 aa12.88□□□□□ -0.35
CAPN1-203ENST00000525013 TMEM183BQ1AE95 376 aa12.87□□□□□ -0.35
CAPN1-203ENST00000525013 ESRGQ1W209 222 aa12.87□□□□□ -0.35
CAPN1-203ENST00000525013 Q6AWC8 147 aa12.87□□□□□ -0.35
CAPN1-203ENST00000525013 TMEM183AQ8IXX5 376 aa12.87□□□□□ -0.35
CAPN1-203ENST00000525013 VSIG2Q96IQ7 327 aa12.87□□□□□ -0.35
CAPN1-203ENST00000525013 ST6GAL2Q96JF0 529 aa12.87□□□□□ -0.35
CAPN1-203ENST00000525013 MDFICQ9P1T7 246 aa12.87□□□□□ -0.35
CAPN1-203ENST00000525013 PKHD1P08F94 4074 aa12.87□□□□□ -0.35
CAPN1-203ENST00000525013 TRAV8-1A0A0A6YYK1 113 aa12.86□□□□□ -0.35
CAPN1-203ENST00000525013 MBP02144 154 aa12.86□□□□□ -0.35
CAPN1-203ENST00000525013 GNG5P63218 68 aa12.86□□□□□ -0.35
CAPN1-203ENST00000525013 C6orf223Q8N319 242 aa12.86□□□□□ -0.35
CAPN1-203ENST00000525013 ASB13Q8WXK3 278 aa12.86□□□□□ -0.35
CAPN1-203ENST00000525013 RAB24Q969Q5 203 aa12.86□□□□□ -0.35
CAPN1-203ENST00000525013 SH3BGRL3Q9H299 93 aa12.86□□□□□ -0.35
CAPN1-203ENST00000525013 FXYD6-FXYD2A0A087WZ82 144 aa12.85□□□□□ -0.35
CAPN1-203ENST00000525013 A0A096LPF7 62 aa12.85□□□□□ -0.35
CAPN1-203ENST00000525013 PAX4O43316 350 aa12.85□□□□□ -0.35
CAPN1-203ENST00000525013 STAG3L2P0CL84 134 aa12.85□□□□□ -0.35
CAPN1-203ENST00000525013 STAG3L3P0CL85 134 aa12.85□□□□□ -0.35
CAPN1-203ENST00000525013 SERF2P84101 59 aa12.85□□□□□ -0.35
CAPN1-203ENST00000525013 ARL6IP6Q8N6S5 226 aa12.85□□□□□ -0.35
CAPN1-203ENST00000525013 TRGV11A0A075B6L2 103 aa12.84□□□□□ -0.35
CAPN1-203ENST00000525013 GCHFRP30047 84 aa12.84□□□□□ -0.35
CAPN1-203ENST00000525013 OR2T35Q8NGX2 323 aa12.84□□□□□ -0.35
CAPN1-203ENST00000525013 SGK494Q96LW2 274 aa12.84□□□□□ -0.35
CAPN1-203ENST00000525013 TREM1Q9NP99 234 aa12.84□□□□□ -0.35
CAPN1-203ENST00000525013 MRPS16Q9Y3D3 137 aaKnown RBP12.84□□□□□ -0.35
CAPN1-203ENST00000525013 PKD1P98161 4303 aa12.84□□□□□ -0.35
CAPN1-203ENST00000525013 BORCS7-ASMTA0A0B4J1R7 106 aa12.83□□□□□ -0.36
CAPN1-203ENST00000525013 F6UZH7 168 aa12.83□□□□□ -0.36
CAPN1-203ENST00000525013 RGS21Q2M5E4 152 aa12.83□□□□□ -0.36
CAPN1-203ENST00000525013 RPL7L1Q6DKI1 246 aaKnown RBP12.83□□□□□ -0.36
CAPN1-203ENST00000525013 IQCF2Q8IXL9 164 aa12.83□□□□□ -0.36
CAPN1-203ENST00000525013 C8orf49Q96NF6 230 aa12.83□□□□□ -0.36
CAPN1-203ENST00000525013 SPXQ9BT56 116 aa12.83□□□□□ -0.36
CAPN1-203ENST00000525013 ACTR3CQ9C0K3 210 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-203ENST00000525013 PRO0255Q9UI72 69 aa12.83□□□□□ -0.36
CAPN1-203ENST00000525013 KIAA1109Q2LD37 5005 aa12.82□□□□□ -0.36
CAPN1-203ENST00000525013 TRAV21A0A0B4J279 112 aa12.82□□□□□ -0.36
CAPN1-203ENST00000525013 TRGV4A0A0C4DH28 118 aa12.82□□□□□ -0.36
CAPN1-203ENST00000525013 RNF222A6NCQ9 220 aa12.82□□□□□ -0.36
CAPN1-203ENST00000525013 CXorf1O96002 111 aa12.82□□□□□ -0.36
CAPN1-203ENST00000525013 SLAQ13239 276 aa12.82□□□□□ -0.36
CAPN1-203ENST00000525013 TTC32Q5I0X7 151 aa12.82□□□□□ -0.36
CAPN1-203ENST00000525013 C5orf17Q8NAS9 161 aa12.82□□□□□ -0.36
CAPN1-203ENST00000525013 TVP23CQ96ET8 276 aa12.82□□□□□ -0.36
CAPN1-203ENST00000525013 NDFIP1Q9BT67 221 aa12.82□□□□□ -0.36
CAPN1-203ENST00000525013 UPK3BQ9BT76 320 aa12.82□□□□□ -0.36
CAPN1-203ENST00000525013 TNFSF18Q9UNG2 199 aa12.82□□□□□ -0.36
CAPN1-203ENST00000525013 HHLA3Q9XRX5 114 aa12.82□□□□□ -0.36
CAPN1-203ENST00000525013 ICOSQ9Y6W8 199 aa12.82□□□□□ -0.36
CAPN1-203ENST00000525013 K7EQM0 130 aa12.81□□□□□ -0.36
CAPN1-203ENST00000525013 GNRH2O43555 120 aa12.81□□□□□ -0.36
CAPN1-203ENST00000525013 TNP2Q05952 138 aa12.81□□□□□ -0.36
CAPN1-203ENST00000525013 FHL2Q14192 279 aa12.81□□□□□ -0.36
CAPN1-203ENST00000525013 TDRG1Q3Y452 100 aa12.81□□□□□ -0.36
CAPN1-203ENST00000525013 TMEM167BQ9NRX6 74 aa12.81□□□□□ -0.36
CAPN1-203ENST00000525013 HERC2O95714 4834 aa12.8□□□□□ -0.36
CAPN1-203ENST00000525013 SERTM2A0A1B0GWG4 89 aa12.8□□□□□ -0.36
CAPN1-203ENST00000525013 TCRAP04437 139 aa12.8□□□□□ -0.36
CAPN1-203ENST00000525013 SFTA3P0C7M3 94 aa12.8□□□□□ -0.36
CAPN1-203ENST00000525013 CRYBA4P53673 196 aa12.8□□□□□ -0.36
CAPN1-203ENST00000525013 SUMO1P63165 101 aaKnown RBP12.8□□□□□ -0.36
CAPN1-203ENST00000525013 SUN5Q8TC36 379 aa12.8□□□□□ -0.36
CAPN1-203ENST00000525013 RASL10AQ92737 203 aa12.79□□□□□ -0.36
CAPN1-203ENST00000525013 ZNF479Q96JC4 524 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 201.3 ms