RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 LGI3Q8N145 548 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 JAGN1Q8N5M9 183 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 EIF4E3Q8N5X7 224 aaKnown RBP0.85□□□□□ -2.27
CD44-212ENST00000524922 FER1L6-AS1Q8NA97 138 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 ZNF555Q8NEP9 628 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 OR8A1Q8NGG7 326 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 BLNKQ8WV28 456 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 TCTEX1D2Q8WW35 142 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 DIRC1Q969H9 104 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 LINC00526Q96FQ7 95 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 TMEM80Q96HE8 168 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 SEC22AQ96IW7 307 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 TRGV9Q99603 122 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 CIB1Q99828 191 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 FAAP24Q9BTP7 215 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 SAMD10Q9BYL1 202 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 CCDC90BQ9GZT6 254 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 SLC25A31Q9H0C2 315 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 GTSF1LQ9H1H1 148 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 SLC35B3Q9H1N7 401 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 Q9HAA7 133 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 HRASLSQ9HDD0 168 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 NOP10Q9NPE3 64 aaKnown RBP0.85□□□□□ -2.27
CD44-212ENST00000524922 SLC39A9Q9NUM3 307 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 PSORS1C1Q9UIG5 152 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 AK3Q9UIJ7 227 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 ANXA10Q9UJ72 324 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 RAB22AQ9UL26 194 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 ANAPC10Q9UM13 185 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 DIMT1Q9UNQ2 313 aaKnown RBP0.85□□□□□ -2.27
CD44-212ENST00000524922 ARL2BPQ9Y2Y0 163 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 KLF12Q9Y4X4 402 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 RBM7Q9Y580 266 aaKnown RBP0.85□□□□□ -2.27
CD44-212ENST00000524922 PXMP4Q9Y6I8 212 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 U3KQ87 197 aa0.85□□□□□ -2.27
CD44-212ENST00000524922 MACF1Q9UPN3 7388 aaKnown RBP0.84□□□□□ -2.27
CD44-212ENST00000524922 TRAV8-7A0A075B6U6 113 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 A0A0A6YYD4 124 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 TRAV1-2A0A0B4J238 106 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 TRAV34A0A0B4J273 112 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 TRBV10-1A0A0K0K1A3 114 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 RBAKDNA6NC62 111 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 MEIS3P1A6NDR6 274 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 SNRPGP15A8MWD9 76 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 ANKRD65E5RJM6 399 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 F8WDY8 70 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 H7C1H1 209 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 CASQ2O14958 399 aaPredicted RBP0.84□□□□□ -2.27
CD44-212ENST00000524922 BET1O15155 118 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 SNAI2O43623 268 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 NDUFS6O75380 124 aaKnown RBP0.84□□□□□ -2.27
CD44-212ENST00000524922 PPYP01298 95 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 TCRBP04435 133 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 OR10J4P0C629 311 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 LIMS3P0CW19 117 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 LIMS4P0CW20 117 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 CALCBP10092 127 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 RNASE2P10153 161 aaKnown RBP0.84□□□□□ -2.27
CD44-212ENST00000524922 MYL12AP19105 171 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 TBPP20226 339 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 OR10J1P30954 320 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 OPRK1P41145 380 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 DAPP51397 102 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 HCCSP53701 268 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 OR10A3P58181 314 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 KRTAP12-4P60329 112 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 SPCS3P61009 180 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 SELENOTP62341 195 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 RPL30P62888 115 aaKnown RBP0.84□□□□□ -2.27
CD44-212ENST00000524922 CACNG7P62955 275 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 RPL18AQ02543 176 aaKnown RBP0.84□□□□□ -2.27
CD44-212ENST00000524922 WFDC2Q14508 124 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 GDF5OSQ5U4N7 250 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 Q6AWC8 147 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 NIT1Q86X76 327 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 OR8I2Q8N0Y5 310 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 CCDC197Q8NCU1 140 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 OR10R2Q8NGX6 335 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 ZFAND1Q8TCF1 268 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 ANP32BQ92688 251 aaKnown RBP0.84□□□□□ -2.27
CD44-212ENST00000524922 TMEM230Q96A57 120 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 ARHGAP5-AS1Q96IT6 56 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 ATP6V1G3Q96LB4 118 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 C9orf85Q96MD7 179 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 LINC01587Q99440 93 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 ATP5SQ99766 215 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 PAIP2Q9BPZ3 127 aaKnown RBP0.84□□□□□ -2.27
CD44-212ENST00000524922 PRADC1Q9BSG0 188 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 DCUN1D5Q9BTE7 237 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 KRTAP4-1Q9BYQ7 146 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 WFDC1Q9HC57 220 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 FUT9Q9Y231 359 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 PRELID1Q9Y255 219 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 TMEM56-RWDD3S4R434 201 aa0.84□□□□□ -2.27
CD44-212ENST00000524922 GVQW2A0A096LPI5 108 aaPredicted RBP0.83□□□□□ -2.28
CD44-212ENST00000524922 TRAV8-2A0A0B4J237 113 aa0.83□□□□□ -2.28
CD44-212ENST00000524922 IGKV1D-13A0A0B4J2D9 117 aa0.83□□□□□ -2.28
CD44-212ENST00000524922 A0A0J9YY99 117 aa0.83□□□□□ -2.28
CD44-212ENST00000524922 DUXBA0A1W2PPF3 345 aa0.83□□□□□ -2.28
CD44-212ENST00000524922 C7orf71A4D174 169 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms