RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 IGKCP01834 107 aa10.21□□□□□ -0.78
CAPN1-202ENST00000524773 DTX2Q86UW9 622 aa10.21□□□□□ -0.78
CAPN1-202ENST00000524773 TSSC4Q9Y5U2 329 aaPredicted RBP10.21□□□□□ -0.78
CAPN1-202ENST00000524773 IGF2RP11717 2491 aa10.21□□□□□ -0.78
CAPN1-202ENST00000524773 TRBV6-1A0A0K0K1D8 114 aa10.2□□□□□ -0.78
CAPN1-202ENST00000524773 ETDBQ3ZM63 59 aa10.2□□□□□ -0.78
CAPN1-202ENST00000524773 DEFB1P60022 68 aa10.2□□□□□ -0.78
CAPN1-202ENST00000524773 SPTAN1Q13813 2472 aaKnown RBP10.2□□□□□ -0.78
CAPN1-202ENST00000524773 KAAG1Q9UBP8 84 aa10.2□□□□□ -0.78
CAPN1-202ENST00000524773 PRRG2O14669 202 aa10.2□□□□□ -0.78
CAPN1-202ENST00000524773 IGLC6P0CF74 106 aa10.2□□□□□ -0.78
CAPN1-202ENST00000524773 SAMD13Q5VXD3 122 aa10.2□□□□□ -0.78
CAPN1-202ENST00000524773 TNFRSF14Q92956 283 aa10.2□□□□□ -0.78
CAPN1-202ENST00000524773 C21orf62Q9NYP8 219 aa10.2□□□□□ -0.78
CAPN1-202ENST00000524773 MFAP4P55083 255 aa10.19□□□□□ -0.78
CAPN1-202ENST00000524773 LYPD1Q8N2G4 141 aa10.19□□□□□ -0.78
CAPN1-202ENST00000524773 COL6A6A6NMZ7 2263 aa10.19□□□□□ -0.78
CAPN1-202ENST00000524773 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.19□□□□□ -0.78
CAPN1-202ENST00000524773 SMIM17P0DL12 118 aa10.19□□□□□ -0.78
CAPN1-202ENST00000524773 PHLDA1Q8WV24 401 aaPredicted RBP10.19□□□□□ -0.78
CAPN1-202ENST00000524773 DPF1Q92782 380 aa10.19□□□□□ -0.78
CAPN1-202ENST00000524773 CRYBG3Q68DQ2 2970 aa10.18□□□□□ -0.78
CAPN1-202ENST00000524773 IGKV3D-20A0A0C4DH25 116 aa10.18□□□□□ -0.78
CAPN1-202ENST00000524773 LY6LH3BQJ8 138 aa10.18□□□□□ -0.78
CAPN1-202ENST00000524773 CTSGP08311 255 aa10.18□□□□□ -0.78
CAPN1-202ENST00000524773 ATP5G2Q06055 141 aa10.18□□□□□ -0.78
CAPN1-202ENST00000524773 OR5A1Q8NGJ0 315 aa10.18□□□□□ -0.78
CAPN1-202ENST00000524773 IGLV11-55A0A075B6I3 123 aa10.17□□□□□ -0.78
CAPN1-202ENST00000524773 IGF1P05019 195 aa10.17□□□□□ -0.78
CAPN1-202ENST00000524773 CFAP161Q6P656 301 aa10.17□□□□□ -0.78
CAPN1-202ENST00000524773 SIVA1O15304 175 aa10.17□□□□□ -0.78
CAPN1-202ENST00000524773 Q5PR19 223 aa10.17□□□□□ -0.78
CAPN1-202ENST00000524773 CEND1Q8N111 149 aa10.17□□□□□ -0.78
CAPN1-202ENST00000524773 MSRB2Q9Y3D2 182 aa10.17□□□□□ -0.78
CAPN1-202ENST00000524773 ECSCRQ19T08 205 aa10.17□□□□□ -0.78
CAPN1-202ENST00000524773 C5orf64Q2M2E5 130 aa10.17□□□□□ -0.78
CAPN1-202ENST00000524773 DPM2O94777 84 aa10.16□□□□□ -0.78
CAPN1-202ENST00000524773 HIST1H4GQ99525 98 aa10.16□□□□□ -0.78
CAPN1-202ENST00000524773 IGLL5B9A064 214 aa10.16□□□□□ -0.78
CAPN1-202ENST00000524773 K7ENP7 123 aa10.16□□□□□ -0.78
CAPN1-202ENST00000524773 RPL7P18124 248 aaKnown RBP10.16□□□□□ -0.78
CAPN1-202ENST00000524773 ZNF479Q96JC4 524 aa10.16□□□□□ -0.78
CAPN1-202ENST00000524773 DPM3Q9P2X0 92 aa10.16□□□□□ -0.78
CAPN1-202ENST00000524773 FABP5P3A8MUU1 101 aa10.15□□□□□ -0.78
CAPN1-202ENST00000524773 BMI1P35226 326 aa10.15□□□□□ -0.78
CAPN1-202ENST00000524773 CYSLTR1Q9Y271 337 aa10.15□□□□□ -0.78
CAPN1-202ENST00000524773 LINC01548A6NM66 108 aa10.15□□□□□ -0.78
CAPN1-202ENST00000524773 FAM90A27PA6NNH2 459 aa10.15□□□□□ -0.78
CAPN1-202ENST00000524773 EMP1P54849 157 aa10.15□□□□□ -0.78
CAPN1-202ENST00000524773 PDE6HQ13956 83 aa10.15□□□□□ -0.78
CAPN1-202ENST00000524773 ZNF672Q499Z4 452 aaPredicted RBP10.15□□□□□ -0.78
CAPN1-202ENST00000524773 CLEC3BP05452 202 aa10.14□□□□□ -0.79
CAPN1-202ENST00000524773 RNF5Q99942 180 aa10.14□□□□□ -0.79
CAPN1-202ENST00000524773 SRSF8Q9BRL6 282 aaKnown RBP10.14□□□□□ -0.79
CAPN1-202ENST00000524773 AGPAT4-IT1Q9H0P7 198 aa10.14□□□□□ -0.79
CAPN1-202ENST00000524773 ZMAT4Q9H898 229 aa10.14□□□□□ -0.79
CAPN1-202ENST00000524773 LINC00527Q9UJ94 153 aa10.14□□□□□ -0.79
CAPN1-202ENST00000524773 CSMD2Q7Z408 3487 aa10.14□□□□□ -0.79
CAPN1-202ENST00000524773 TGFAP01135 160 aa10.14□□□□□ -0.79
CAPN1-202ENST00000524773 C12orf74Q32Q52 190 aa10.14□□□□□ -0.79
CAPN1-202ENST00000524773 PSMG3-AS1Q96PY0 264 aa10.14□□□□□ -0.79
CAPN1-202ENST00000524773 SPAG8Q99932 426 aaPredicted RBP10.14□□□□□ -0.79
CAPN1-202ENST00000524773 H3BVH4 76 aa10.14□□□□□ -0.79
CAPN1-202ENST00000524773 RAB1BQ9H0U4 201 aa10.14□□□□□ -0.79
CAPN1-202ENST00000524773 SPANXB1Q9NS25 103 aaPredicted RBP10.14□□□□□ -0.79
CAPN1-202ENST00000524773 G3V318 75 aa10.13□□□□□ -0.79
CAPN1-202ENST00000524773 C15orf32Q32M92 178 aa10.13□□□□□ -0.79
CAPN1-202ENST00000524773 IGKV3-7A0A075B6H7 116 aa10.13□□□□□ -0.79
CAPN1-202ENST00000524773 IGLV2-18A0A075B6J9 118 aa10.13□□□□□ -0.79
CAPN1-202ENST00000524773 GAGE12HA6NDE8 117 aa10.13□□□□□ -0.79
CAPN1-202ENST00000524773 Q8NA96 180 aa10.13□□□□□ -0.79
CAPN1-202ENST00000524773 M0R381 172 aa10.12□□□□□ -0.79
CAPN1-202ENST00000524773 CLEC19AQ6UXS0 136 aa10.12□□□□□ -0.79
CAPN1-202ENST00000524773 MYOZ3Q8TDC0 251 aa10.12□□□□□ -0.79
CAPN1-202ENST00000524773 NXT2Q9NPJ8 142 aaKnown RBP10.12□□□□□ -0.79
CAPN1-202ENST00000524773 PIEZO1Q92508 2521 aa10.12□□□□□ -0.79
CAPN1-202ENST00000524773 CD3EP07766 207 aa10.12□□□□□ -0.79
CAPN1-202ENST00000524773 PRR9Q5T870 116 aa10.12□□□□□ -0.79
CAPN1-202ENST00000524773 SPANXN1Q5VSR9 72 aa10.12□□□□□ -0.79
CAPN1-202ENST00000524773 CHD8Q9HCK8 2581 aa10.12□□□□□ -0.79
CAPN1-202ENST00000524773 E9PLD3 99 aa10.11□□□□□ -0.79
CAPN1-202ENST00000524773 CDSNQ15517 529 aa10.11□□□□□ -0.79
CAPN1-202ENST00000524773 FOXI2Q6ZQN5 318 aa10.11□□□□□ -0.79
CAPN1-202ENST00000524773 RPL39LQ96EH5 51 aaKnown RBP10.11□□□□□ -0.79
CAPN1-202ENST00000524773 SIGMAR1Q99720 223 aa10.11□□□□□ -0.79
CAPN1-202ENST00000524773 CCDC144NLQ6NUI1 221 aa10.11□□□□□ -0.79
CAPN1-202ENST00000524773 Q8N8P6 123 aa10.11□□□□□ -0.79
CAPN1-202ENST00000524773 NRACQ8N912 160 aa10.11□□□□□ -0.79
CAPN1-202ENST00000524773 LAGE3Q14657 143 aa10.11□□□□□ -0.79
CAPN1-202ENST00000524773 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.11□□□□□ -0.79
CAPN1-202ENST00000524773 PTH2Q96A98 100 aa10.11□□□□□ -0.79
CAPN1-202ENST00000524773 CLUHP3Q96NS8 147 aa10.11□□□□□ -0.79
CAPN1-202ENST00000524773 C20orf78Q9BR46 151 aa10.11□□□□□ -0.79
CAPN1-202ENST00000524773 NCOR2Q9Y618 2525 aa10.1□□□□□ -0.79
CAPN1-202ENST00000524773 KLHL30-AS1Q8NEE0 82 aa10.1□□□□□ -0.79
CAPN1-202ENST00000524773 TM2D2Q9BX73 214 aa10.1□□□□□ -0.79
CAPN1-202ENST00000524773 B9A039 149 aa10.1□□□□□ -0.79
CAPN1-202ENST00000524773 GLMPQ8WWB7 406 aa10.1□□□□□ -0.79
CAPN1-202ENST00000524773 HIF1ANQ9NWT6 349 aa10.1□□□□□ -0.79
CAPN1-202ENST00000524773 HIGD1BQ9P298 99 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms