RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 SERTM2A0A1B0GWG4 89 aa9.16□□□□□ -0.94
VEGFA-224ENST00000523873 TMEM189A5PLL7 270 aa9.16□□□□□ -0.94
VEGFA-224ENST00000523873 NMBP08949 121 aa9.16□□□□□ -0.94
VEGFA-224ENST00000523873 FLI1Q01543 452 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-224ENST00000523873 MUC21Q5SSG8 566 aa9.16□□□□□ -0.94
VEGFA-224ENST00000523873 Q6ZTC4 211 aa9.16□□□□□ -0.94
VEGFA-224ENST00000523873 CCDC28AQ8IWP9 274 aa9.16□□□□□ -0.94
VEGFA-224ENST00000523873 TMEM75Q8N9X5 138 aa9.16□□□□□ -0.94
VEGFA-224ENST00000523873 PHLDA1Q8WV24 401 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-224ENST00000523873 TREM1Q9NP99 234 aa9.16□□□□□ -0.94
VEGFA-224ENST00000523873 GNG13Q9P2W3 67 aa9.16□□□□□ -0.94
VEGFA-224ENST00000523873 DKK2Q9UBU2 259 aa9.16□□□□□ -0.94
VEGFA-224ENST00000523873 TP53TG3Q9ULZ0 132 aa9.16□□□□□ -0.94
VEGFA-224ENST00000523873 TRBV7-9A0A0J9YWB2 115 aa9.15□□□□□ -0.94
VEGFA-224ENST00000523873 K7EQM0 130 aa9.15□□□□□ -0.94
VEGFA-224ENST00000523873 RGS13O14921 159 aa9.15□□□□□ -0.94
VEGFA-224ENST00000523873 SPART-AS1P0CW21 52 aa9.15□□□□□ -0.94
VEGFA-224ENST00000523873 RNASE8Q8TDE3 154 aaKnown RBP9.15□□□□□ -0.94
VEGFA-224ENST00000523873 TMEM263Q8WUH6 116 aaKnown RBP9.15□□□□□ -0.94
VEGFA-224ENST00000523873 C16orf74Q96GX8 76 aa9.15□□□□□ -0.94
VEGFA-224ENST00000523873 PYGO2Q9BRQ0 406 aa9.15□□□□□ -0.94
VEGFA-224ENST00000523873 LENEPQ9Y5L5 61 aa9.15□□□□□ -0.94
VEGFA-224ENST00000523873 TRAV1-1A0A0B4J248 108 aa9.14□□□□□ -0.95
VEGFA-224ENST00000523873 SCO2A0A1W2PP80 73 aa9.14□□□□□ -0.95
VEGFA-224ENST00000523873 CBY3A6NI87 242 aa9.14□□□□□ -0.95
VEGFA-224ENST00000523873 ZNF80P51504 273 aaPredicted RBP9.14□□□□□ -0.95
VEGFA-224ENST00000523873 Q6AWC8 147 aa9.14□□□□□ -0.95
VEGFA-224ENST00000523873 CEMP1Q6PRD7 247 aaPredicted RBP9.14□□□□□ -0.95
VEGFA-224ENST00000523873 Q86TA4 180 aa9.14□□□□□ -0.95
VEGFA-224ENST00000523873 NDFIP1Q9BT67 221 aa9.14□□□□□ -0.95
VEGFA-224ENST00000523873 NKX6-2Q9C056 277 aaPredicted RBP9.14□□□□□ -0.95
VEGFA-224ENST00000523873 NOP10Q9NPE3 64 aaKnown RBP9.14□□□□□ -0.95
VEGFA-224ENST00000523873 NAGKQ9UJ70 344 aa9.14□□□□□ -0.95
VEGFA-224ENST00000523873 ARL2-SNX15V9GYD0 113 aa9.14□□□□□ -0.95
VEGFA-224ENST00000523873 IGHV1OR15-1A0A075B7D0 117 aa9.13□□□□□ -0.95
VEGFA-224ENST00000523873 C11orf94C9JXX5 98 aa9.13□□□□□ -0.95
VEGFA-224ENST00000523873 AKR1C3P42330 323 aa9.13□□□□□ -0.95
VEGFA-224ENST00000523873 EIF4E3Q8N5X7 224 aaKnown RBP9.13□□□□□ -0.95
VEGFA-224ENST00000523873 HIST1H2BAQ96A08 127 aa9.13□□□□□ -0.95
VEGFA-224ENST00000523873 CSMD3Q7Z407 3707 aa9.13□□□□□ -0.95
VEGFA-224ENST00000523873 NUPR2A6NF83 97 aa9.12□□□□□ -0.95
VEGFA-224ENST00000523873 GCGP01275 180 aa9.12□□□□□ -0.95
VEGFA-224ENST00000523873 DEFB130BP0DP73 79 aa9.12□□□□□ -0.95
VEGFA-224ENST00000523873 DEFB130AP0DP74 79 aa9.12□□□□□ -0.95
VEGFA-224ENST00000523873 PPT1P50897 306 aa9.12□□□□□ -0.95
VEGFA-224ENST00000523873 C11orf72Q8NBR9 251 aa9.12□□□□□ -0.95
VEGFA-224ENST00000523873 LINC00467Q9BRT7 94 aa9.12□□□□□ -0.95
VEGFA-224ENST00000523873 MANBALQ9NQG1 85 aa9.12□□□□□ -0.95
VEGFA-224ENST00000523873 GSN-AS1Q9NRJ2 163 aa9.12□□□□□ -0.95
VEGFA-224ENST00000523873 TRAV10A0A0B4J240 114 aa9.11□□□□□ -0.95
VEGFA-224ENST00000523873 SNURFLB1AK76 121 aa9.11□□□□□ -0.95
VEGFA-224ENST00000523873 TEX46H3BTG2 121 aa9.11□□□□□ -0.95
VEGFA-224ENST00000523873 HTN3P15516 51 aa9.11□□□□□ -0.95
VEGFA-224ENST00000523873 DAD1P61803 113 aa9.11□□□□□ -0.95
VEGFA-224ENST00000523873 UBE2G1P62253 170 aa9.11□□□□□ -0.95
VEGFA-224ENST00000523873 TMEM183BQ1AE95 376 aa9.11□□□□□ -0.95
VEGFA-224ENST00000523873 ANXA2RQ3ZCQ2 193 aa9.11□□□□□ -0.95
VEGFA-224ENST00000523873 ZNF493Q6ZR52 646 aa9.11□□□□□ -0.95
VEGFA-224ENST00000523873 NHLRC2Q8NBF2 726 aa9.11□□□□□ -0.95
VEGFA-224ENST00000523873 PCNPQ8WW12 178 aaKnown RBP9.11□□□□□ -0.95
VEGFA-224ENST00000523873 C11orf21Q9P2W6 132 aa9.11□□□□□ -0.95
VEGFA-224ENST00000523873 KLF12Q9Y4X4 402 aa9.11□□□□□ -0.95
VEGFA-224ENST00000523873 TIMM8BQ9Y5J9 83 aaPredicted RBP9.11□□□□□ -0.95
VEGFA-224ENST00000523873 MUC4Q99102 2169 aa9.1□□□□□ -0.95
VEGFA-224ENST00000523873 NACAE9PAV3 2078 aa9.1□□□□□ -0.95
VEGFA-224ENST00000523873 DEFB131BA0A096LNP1 70 aa9.1□□□□□ -0.95
VEGFA-224ENST00000523873 TRAV21A0A0B4J279 112 aa9.1□□□□□ -0.95
VEGFA-224ENST00000523873 TEX48A0A1B0GUV7 120 aa9.1□□□□□ -0.95
VEGFA-224ENST00000523873 FBLL1A6NHQ2 334 aaKnown RBP9.1□□□□□ -0.95
VEGFA-224ENST00000523873 LYRM9A8MSI8 78 aa9.1□□□□□ -0.95
VEGFA-224ENST00000523873 GNRH2O43555 120 aa9.1□□□□□ -0.95
VEGFA-224ENST00000523873 SMUG1Q53HV7 270 aa9.1□□□□□ -0.95
VEGFA-224ENST00000523873 SAPCD1Q5SSQ6 148 aa9.1□□□□□ -0.95
VEGFA-224ENST00000523873 FAM159AQ6UWV7 190 aa9.1□□□□□ -0.95
VEGFA-224ENST00000523873 TMEM183AQ8IXX5 376 aa9.1□□□□□ -0.95
VEGFA-224ENST00000523873 C2CD4CQ8TF44 421 aa9.1□□□□□ -0.95
VEGFA-224ENST00000523873 ZC2HC1AQ96GY0 325 aa9.1□□□□□ -0.95
VEGFA-224ENST00000523873 FMC1Q96HJ9 113 aa9.1□□□□□ -0.95
VEGFA-224ENST00000523873 MDFICQ9P1T7 246 aa9.1□□□□□ -0.95
VEGFA-224ENST00000523873 DYNC2H1Q8NCM8 4307 aaKnown RBP9.1□□□□□ -0.95
VEGFA-224ENST00000523873 GAGE12BA1L429 117 aa9.09□□□□□ -0.95
VEGFA-224ENST00000523873 GAGE7O76087 117 aa9.09□□□□□ -0.95
VEGFA-224ENST00000523873 TYMSP04818 313 aa9.09□□□□□ -0.95
VEGFA-224ENST00000523873 GAGE12FP0CL80 117 aa9.09□□□□□ -0.95
VEGFA-224ENST00000523873 GAGE12GP0CL81 117 aa9.09□□□□□ -0.95
VEGFA-224ENST00000523873 GAGE12IP0CL82 117 aa9.09□□□□□ -0.95
VEGFA-224ENST00000523873 BCL2P10415 239 aa9.09□□□□□ -0.95
VEGFA-224ENST00000523873 BLOC1S1P78537 153 aa9.09□□□□□ -0.95
VEGFA-224ENST00000523873 Q6ZTI0 123 aa9.09□□□□□ -0.95
VEGFA-224ENST00000523873 ZNF680Q8NEM1 530 aa9.09□□□□□ -0.95
VEGFA-224ENST00000523873 TCEAL7Q9BRU2 100 aa9.09□□□□□ -0.95
VEGFA-224ENST00000523873 DERL1Q9BUN8 251 aa9.09□□□□□ -0.95
VEGFA-224ENST00000523873 KLK5Q9Y337 293 aaPredicted RBP9.09□□□□□ -0.95
VEGFA-224ENST00000523873 PLECQ15149 4684 aaKnown RBP9.08□□□□□ -0.96
VEGFA-224ENST00000523873 IGLL5B9A064 214 aa9.08□□□□□ -0.96
VEGFA-224ENST00000523873 LTAP01374 205 aa9.08□□□□□ -0.96
VEGFA-224ENST00000523873 IFNA1P01562 189 aa9.08□□□□□ -0.96
VEGFA-224ENST00000523873 CRIP1P50238 77 aa9.08□□□□□ -0.96
VEGFA-224ENST00000523873 TCL1AP56279 114 aa9.08□□□□□ -0.96
VEGFA-224ENST00000523873 MRPL16Q9NX20 251 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms