RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 C9orf47Q6ZRZ4 202 aa13.71□□□□□ -0.22
IKBKB-228ENST00000523517 PCP2Q8IVA1 136 aa13.71□□□□□ -0.22
IKBKB-228ENST00000523517 TRGV3P03979 118 aa13.7□□□□□ -0.22
IKBKB-228ENST00000523517 ADAMTSL5Q6ZMM2 481 aa13.7□□□□□ -0.22
IKBKB-228ENST00000523517 Q8N8P6 123 aa13.7□□□□□ -0.22
IKBKB-228ENST00000523517 IGHV7-4-1A0A0J9YVY3 117 aa13.69□□□□□ -0.22
IKBKB-228ENST00000523517 OR4X2Q8NGF9 303 aa13.69□□□□□ -0.22
IKBKB-228ENST00000523517 OR2K2Q8NGT1 345 aa13.69□□□□□ -0.22
IKBKB-228ENST00000523517 A6NDN8 102 aa13.69□□□□□ -0.22
IKBKB-228ENST00000523517 ODF1Q14990 250 aa13.69□□□□□ -0.22
IKBKB-228ENST00000523517 TMEM219Q86XT9 240 aa13.69□□□□□ -0.22
IKBKB-228ENST00000523517 PIFOQ8TCI5 191 aa13.69□□□□□ -0.22
IKBKB-228ENST00000523517 COL25A1Q9BXS0 654 aaPredicted RBP13.69□□□□□ -0.22
IKBKB-228ENST00000523517 ZMAT4Q9H898 229 aa13.69□□□□□ -0.22
IKBKB-228ENST00000523517 IGLV2-18A0A075B6J9 118 aa13.68□□□□□ -0.22
IKBKB-228ENST00000523517 SMIM15Q7Z3B0 74 aa13.68□□□□□ -0.22
IKBKB-228ENST00000523517 TMEM158Q8WZ71 300 aa13.68□□□□□ -0.22
IKBKB-228ENST00000523517 TRAV41A0A0B4J266 112 aa13.68□□□□□ -0.22
IKBKB-228ENST00000523517 H3BRM9 83 aa13.68□□□□□ -0.22
IKBKB-228ENST00000523517 PRSS1P07477 247 aa13.68□□□□□ -0.22
IKBKB-228ENST00000523517 PSMG4Q5JS54 123 aa13.68□□□□□ -0.22
IKBKB-228ENST00000523517 C19orf54Q5BKX5 351 aa13.67□□□□□ -0.22
IKBKB-228ENST00000523517 Q6ZQT7 251 aa13.67□□□□□ -0.22
IKBKB-228ENST00000523517 C16orf92Q96LL3 132 aa13.67□□□□□ -0.22
IKBKB-228ENST00000523517 ATP6V0BQ99437 205 aa13.67□□□□□ -0.22
IKBKB-228ENST00000523517 MOB4Q9Y3A3 225 aa13.67□□□□□ -0.22
IKBKB-228ENST00000523517 FAM223BA6NKX1 122 aa13.67□□□□□ -0.22
IKBKB-228ENST00000523517 CDKN1BP46527 198 aa13.67□□□□□ -0.22
IKBKB-228ENST00000523517 FAM223AQ8IWN6 122 aa13.67□□□□□ -0.22
IKBKB-228ENST00000523517 HHLA3Q9XRX5 114 aa13.67□□□□□ -0.22
IKBKB-228ENST00000523517 IGHV4-4A0A075B6R2 117 aa13.66□□□□□ -0.22
IKBKB-228ENST00000523517 C9orf118A6NHY6 69 aa13.66□□□□□ -0.22
IKBKB-228ENST00000523517 NRACQ8N912 160 aa13.66□□□□□ -0.22
IKBKB-228ENST00000523517 CST9LQ9H4G1 147 aa13.66□□□□□ -0.22
IKBKB-228ENST00000523517 LINC00527Q9UJ94 153 aa13.66□□□□□ -0.22
IKBKB-228ENST00000523517 NBASA2RRP1 2371 aa13.66□□□□□ -0.22
IKBKB-228ENST00000523517 IGHV3OR16-10A0A075B7F0 116 aa13.66□□□□□ -0.22
IKBKB-228ENST00000523517 PRSS47A8MTI9 375 aa13.66□□□□□ -0.22
IKBKB-228ENST00000523517 GLMPQ8WWB7 406 aa13.66□□□□□ -0.22
IKBKB-228ENST00000523517 UFC1Q9Y3C8 167 aa13.66□□□□□ -0.22
IKBKB-228ENST00000523517 PCP4P48539 62 aa13.65□□□□□ -0.22
IKBKB-228ENST00000523517 TRAV26-2A0A0B4J265 109 aa13.65□□□□□ -0.22
IKBKB-228ENST00000523517 ATP5LO75964 103 aa13.65□□□□□ -0.22
IKBKB-228ENST00000523517 KIR3DS1Q14943 382 aa13.65□□□□□ -0.22
IKBKB-228ENST00000523517 SPANXN1Q5VSR9 72 aa13.65□□□□□ -0.22
IKBKB-228ENST00000523517 ITLN2Q8WWU7 325 aaPredicted RBP13.65□□□□□ -0.22
IKBKB-228ENST00000523517 C20orf173Q96LM9 149 aa13.65□□□□□ -0.22
IKBKB-228ENST00000523517 FOXC2Q99958 501 aa13.65□□□□□ -0.22
IKBKB-228ENST00000523517 IGF2RP11717 2491 aa13.65□□□□□ -0.23
IKBKB-228ENST00000523517 IGKV2D-26A0A0A0MRZ7 120 aa13.64□□□□□ -0.23
IKBKB-228ENST00000523517 IGKCP01834 107 aa13.64□□□□□ -0.23
IKBKB-228ENST00000523517 SMIM17P0DL12 118 aa13.64□□□□□ -0.23
IKBKB-228ENST00000523517 CRIP2P52943 208 aaPredicted RBP13.64□□□□□ -0.23
IKBKB-228ENST00000523517 C9orf139Q6ZV77 190 aa13.64□□□□□ -0.23
IKBKB-228ENST00000523517 AP1S3Q96PC3 154 aa13.64□□□□□ -0.23
IKBKB-228ENST00000523517 SMPXQ9UHP9 88 aa13.64□□□□□ -0.23
IKBKB-228ENST00000523517 ARL3P36405 182 aa13.64□□□□□ -0.23
IKBKB-228ENST00000523517 PRR9Q5T870 116 aa13.64□□□□□ -0.23
IKBKB-228ENST00000523517 WNK2Q9Y3S1 2297 aa13.64□□□□□ -0.23
IKBKB-228ENST00000523517 GAGE12BA1L429 117 aa13.63□□□□□ -0.23
IKBKB-228ENST00000523517 GAGE10A6NGK3 116 aa13.63□□□□□ -0.23
IKBKB-228ENST00000523517 LAGE3Q14657 143 aa13.63□□□□□ -0.23
IKBKB-228ENST00000523517 MED13LQ71F56 2210 aa13.63□□□□□ -0.23
IKBKB-228ENST00000523517 ATRXP46100 2492 aa13.63□□□□□ -0.23
IKBKB-228ENST00000523517 LY6DQ14210 128 aa13.63□□□□□ -0.23
IKBKB-228ENST00000523517 OCIAD2Q56VL3 154 aa13.63□□□□□ -0.23
IKBKB-228ENST00000523517 JMJD8Q96S16 334 aa13.63□□□□□ -0.23
IKBKB-228ENST00000523517 LENEPQ9Y5L5 61 aa13.63□□□□□ -0.23
IKBKB-228ENST00000523517 IGHV1-69DA0A0B4J2H0 117 aa13.62□□□□□ -0.23
IKBKB-228ENST00000523517 H3BVH4 76 aa13.62□□□□□ -0.23
IKBKB-228ENST00000523517 DPM2O94777 84 aa13.62□□□□□ -0.23
IKBKB-228ENST00000523517 IGHV1-69P01742 117 aa13.62□□□□□ -0.23
IKBKB-228ENST00000523517 IGF1P05019 195 aa13.62□□□□□ -0.23
IKBKB-228ENST00000523517 H3BUT2 72 aa13.61□□□□□ -0.23
IKBKB-228ENST00000523517 C19orf84I3L1E1 186 aa13.61□□□□□ -0.23
IKBKB-228ENST00000523517 RNF151Q2KHN1 245 aa13.61□□□□□ -0.23
IKBKB-228ENST00000523517 UNQ9165/PRO28630Q6UXU0 137 aa13.61□□□□□ -0.23
IKBKB-228ENST00000523517 TMEM8BA6NDV4 472 aa13.61□□□□□ -0.23
IKBKB-228ENST00000523517 TRBV12-3P01733 135 aa13.61□□□□□ -0.23
IKBKB-228ENST00000523517 IGHV4-39P01824 125 aa13.61□□□□□ -0.23
IKBKB-228ENST00000523517 C21orf62-AS1Q17RA5 79 aa13.61□□□□□ -0.23
IKBKB-228ENST00000523517 UFSP1Q6NVU6 142 aa13.61□□□□□ -0.23
IKBKB-228ENST00000523517 MYOZ3Q8TDC0 251 aa13.61□□□□□ -0.23
IKBKB-228ENST00000523517 LINC00477Q96M19 166 aa13.61□□□□□ -0.23
IKBKB-228ENST00000523517 A0A0G2JLM5 398 aa13.6□□□□□ -0.23
IKBKB-228ENST00000523517 BRD3OSQ6XYD6 125 aa13.6□□□□□ -0.23
IKBKB-228ENST00000523517 GTF2H5Q6ZYL4 71 aa13.6□□□□□ -0.23
IKBKB-228ENST00000523517 GTSCR1Q86UQ5 136 aa13.6□□□□□ -0.23
IKBKB-228ENST00000523517 GPHB5Q86YW7 130 aa13.6□□□□□ -0.23
IKBKB-228ENST00000523517 MRAP2Q96G30 205 aa13.6□□□□□ -0.23
IKBKB-228ENST00000523517 HIGD1BQ9P298 99 aa13.6□□□□□ -0.23
IKBKB-228ENST00000523517 SRSF1Q07955 248 aaKnown RBP eCLIP13.6□□□□□ -0.236e-7■■□□□ 12.4
IKBKB-228ENST00000523517 TTTY13Q9BZ97 58 aa13.6□□□□□ -0.23
IKBKB-228ENST00000523517 SVEP1Q4LDE5 3571 aa13.59□□□□□ -0.23
IKBKB-228ENST00000523517 NDUFA4O00483 81 aa13.59□□□□□ -0.23
IKBKB-228ENST00000523517 ZC2HC1BQ5TFG8 222 aa13.59□□□□□ -0.23
IKBKB-228ENST00000523517 ZFAND2AQ8N6M9 145 aa13.59□□□□□ -0.23
IKBKB-228ENST00000523517 NAA38Q9BRA0 125 aaKnown RBP13.59□□□□□ -0.23
IKBKB-228ENST00000523517 J3KRW8 73 aa13.59□□□□□ -0.23
IKBKB-228ENST00000523517 OR10J6PQ8NGY7 276 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms