RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 A0A1W2PNM2 257 aa2.33□□□□□ -2.04
SKP1-209ENST00000522552 A0A1W2PRS3 328 aa2.33□□□□□ -2.04
SKP1-209ENST00000522552 IBA57-AS1B1ANH7 110 aa2.33□□□□□ -2.04
SKP1-209ENST00000522552 E7EQL1 145 aa2.33□□□□□ -2.04
SKP1-209ENST00000522552 E7EUB6 86 aa2.33□□□□□ -2.04
SKP1-209ENST00000522552 J3QLW9 94 aa2.33□□□□□ -2.04
SKP1-209ENST00000522552 EDF1O60869 148 aaKnown RBP2.33□□□□□ -2.04
SKP1-209ENST00000522552 PROSCO94903 275 aa2.33□□□□□ -2.04
SKP1-209ENST00000522552 UBL3O95164 117 aa2.33□□□□□ -2.04
SKP1-209ENST00000522552 ASAH2BP0C7U1 165 aa2.33□□□□□ -2.04
SKP1-209ENST00000522552 MIFP14174 115 aa2.33□□□□□ -2.04
SKP1-209ENST00000522552 SSR2P43308 183 aa2.33□□□□□ -2.04
SKP1-209ENST00000522552 DSCR4P56555 118 aaPredicted RBP2.33□□□□□ -2.04
SKP1-209ENST00000522552 OR2T2Q6IF00 324 aa2.33□□□□□ -2.04
SKP1-209ENST00000522552 USP54Q70EL1 1684 aa2.33□□□□□ -2.04
SKP1-209ENST00000522552 MUCL1Q96DR8 90 aa2.33□□□□□ -2.04
SKP1-209ENST00000522552 TP53TG3Q9ULZ0 132 aa2.33□□□□□ -2.04
SKP1-209ENST00000522552 ANKRD26Q9UPS8 1709 aa2.33□□□□□ -2.04
SKP1-209ENST00000522552 V9GYS6 101 aa2.33□□□□□ -2.04
SKP1-209ENST00000522552 FREM3P0C091 2139 aa2.32□□□□□ -2.04
SKP1-209ENST00000522552 MGAMO43451 1857 aa2.32□□□□□ -2.04
SKP1-209ENST00000522552 TRPM7Q96QT4 1865 aa2.32□□□□□ -2.04
SKP1-209ENST00000522552 IGKV3D-11A0A0A0MRZ8 115 aa2.32□□□□□ -2.04
SKP1-209ENST00000522552 MUC21A0A0G2JKD1 596 aa2.32□□□□□ -2.04
SKP1-209ENST00000522552 G3V3Q6 166 aa2.32□□□□□ -2.04
SKP1-209ENST00000522552 HINT1P49773 126 aaPredicted RBP2.32□□□□□ -2.04
SKP1-209ENST00000522552 ERHP84090 104 aaKnown RBP2.32□□□□□ -2.04
SKP1-209ENST00000522552 DEFB113Q30KQ7 82 aa2.32□□□□□ -2.04
SKP1-209ENST00000522552 C9orf163Q8N9P6 203 aa2.32□□□□□ -2.04
SKP1-209ENST00000522552 VSTM2AQ8TAG5 236 aa2.32□□□□□ -2.04
SKP1-209ENST00000522552 PSORS1C2Q9UIG4 136 aa2.32□□□□□ -2.04
SKP1-209ENST00000522552 LHFPL6Q9Y693 200 aa2.32□□□□□ -2.04
SKP1-209ENST00000522552 SNRNP200O75643 2136 aaKnown RBP2.32□□□□□ -2.04
SKP1-209ENST00000522552 EML5Q05BV3 1969 aa2.32□□□□□ -2.04
SKP1-209ENST00000522552 KIAA1551Q9HCM1 1747 aa2.32□□□□□ -2.04
SKP1-209ENST00000522552 MUC21A0A140T8X8 626 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 IL5P05113 134 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 PYDC2Q56P42 97 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 ARPINQ7Z6K5 226 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 C10orf105Q8TEF2 133 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 SMIM7Q9BQ49 75 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 Q9BRP9 147 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 TMEM242Q9NWH2 141 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 SCP2D1Q9UJQ7 156 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 STRCQ7RTU9 1775 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 ADGRL2O95490 1459 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 GPR179Q6PRD1 2367 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 SHANK1Q9Y566 2161 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 ZFHX2Q9C0A1 2572 aaPredicted RBP2.31□□□□□ -2.04
SKP1-209ENST00000522552 IGKV2D-24A0A075B6R9 120 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 A0A087WSZ3 146 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 TCRBV3S1A0A5B6 114 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 TMEM262E9PQX1 116 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 GYPBP06028 91 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 KRTAP1-4P0C5Y4 121 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 P0C880 135 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 NPC2P61916 151 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 UBA52P62987 128 aaKnown RBP2.31□□□□□ -2.04
SKP1-209ENST00000522552 MOBPQ13875 183 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 LY6EQ16553 131 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 TMEM254Q8TBM7 123 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 DSCR8Q96T75 97 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 NDUFB11Q9NX14 153 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 ANAPC11Q9NYG5 84 aa2.31□□□□□ -2.04
SKP1-209ENST00000522552 DCAF1Q9Y4B6 1507 aa2.3□□□□□ -2.04
SKP1-209ENST00000522552 MED14O60244 1454 aa2.3□□□□□ -2.04
SKP1-209ENST00000522552 ADAMTS9Q9P2N4 1935 aa2.3□□□□□ -2.04
SKP1-209ENST00000522552 DEFB134Q4QY38 66 aa2.3□□□□□ -2.04
SKP1-209ENST00000522552 CASC2Q6XLA1 102 aa2.3□□□□□ -2.04
SKP1-209ENST00000522552 SLC25A26Q70HW3 274 aa2.3□□□□□ -2.04
SKP1-209ENST00000522552 SPTSSAQ969W0 71 aa2.3□□□□□ -2.04
SKP1-209ENST00000522552 PRO2289Q9P1D8 64 aa2.3□□□□□ -2.04
SKP1-209ENST00000522552 HEATR1Q9H583 2144 aaKnown RBP2.3□□□□□ -2.04
SKP1-209ENST00000522552 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.3□□□□□ -2.04
SKP1-209ENST00000522552 TROQ12816 1431 aaPredicted RBP2.3□□□□□ -2.04
SKP1-209ENST00000522552 GLI3P10071 1580 aa2.29□□□□□ -2.04
SKP1-209ENST00000522552 COL11A1P12107 1806 aaPredicted RBP2.29□□□□□ -2.04
SKP1-209ENST00000522552 IGLV4-60A0A075B6I1 120 aa2.29□□□□□ -2.04
SKP1-209ENST00000522552 TCRBV4S1A1TA0A5B7 111 aa2.29□□□□□ -2.04
SKP1-209ENST00000522552 NDUFB6O95139 128 aa2.29□□□□□ -2.04
SKP1-209ENST00000522552 PIRTP0C851 137 aa2.29□□□□□ -2.04
SKP1-209ENST00000522552 KRTAP11-1Q8IUC1 163 aa2.29□□□□□ -2.04
SKP1-209ENST00000522552 AQP10Q96PS8 301 aa2.29□□□□□ -2.04
SKP1-209ENST00000522552 DPY30Q9C005 99 aa2.29□□□□□ -2.04
SKP1-209ENST00000522552 COL24A1Q17RW2 1714 aa2.29□□□□□ -2.04
SKP1-209ENST00000522552 ADGRL1O94910 1474 aa2.29□□□□□ -2.04
SKP1-209ENST00000522552 NSD3Q9BZ95 1437 aa2.29□□□□□ -2.04
SKP1-209ENST00000522552 PCNX2A6NKB5 2137 aa2.29□□□□□ -2.04
SKP1-209ENST00000522552 SLIT3O75094 1523 aa2.28□□□□□ -2.04
SKP1-209ENST00000522552 TRAV10A0A0B4J240 114 aa2.28□□□□□ -2.04
SKP1-209ENST00000522552 SNCGO76070 127 aa2.28□□□□□ -2.04
SKP1-209ENST00000522552 GAS8-AS1O95177 125 aa2.28□□□□□ -2.04
SKP1-209ENST00000522552 ZCCHC23Q6ZST2 131 aa2.28□□□□□ -2.04
SKP1-209ENST00000522552 Q8TAT8 98 aa2.28□□□□□ -2.04
SKP1-209ENST00000522552 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.04
SKP1-209ENST00000522552 SMARCA4P51532 1647 aa2.28□□□□□ -2.04
SKP1-209ENST00000522552 WNK3Q9BYP7 1800 aa2.28□□□□□ -2.05
SKP1-209ENST00000522552 TRAV12-1A0A0B4J245 112 aa2.28□□□□□ -2.05
SKP1-209ENST00000522552 FAM24AA6NFZ4 105 aa2.28□□□□□ -2.05
SKP1-209ENST00000522552 ERC2-IT1O76042 136 aa2.28□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms