RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 LAMB2P55268 1798 aa1.72□□□□□ -2.13
SQLE-204ENST00000520493 ABCA13Q86UQ4 5058 aa1.72□□□□□ -2.13
SQLE-204ENST00000520493 UTP20O75691 2785 aaKnown RBP1.72□□□□□ -2.13
SQLE-204ENST00000520493 ABCC10Q5T3U5 1492 aa1.72□□□□□ -2.13
SQLE-204ENST00000520493 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.72□□□□□ -2.13
SQLE-204ENST00000520493 TRAV10A0A0B4J240 114 aa1.72□□□□□ -2.13
SQLE-204ENST00000520493 TRBV6-5A0A0K0K1A5 114 aa1.72□□□□□ -2.13
SQLE-204ENST00000520493 ERC2-IT1O76042 136 aa1.72□□□□□ -2.13
SQLE-204ENST00000520493 RNASE3P12724 160 aaKnown RBP1.72□□□□□ -2.13
SQLE-204ENST00000520493 COX4I1P13073 169 aa1.72□□□□□ -2.13
SQLE-204ENST00000520493 QRFPP83859 136 aa1.72□□□□□ -2.13
SQLE-204ENST00000520493 ZNF833PQ6ZTB9 187 aa1.72□□□□□ -2.13
SQLE-204ENST00000520493 OR4C6Q8NH72 309 aa1.72□□□□□ -2.13
SQLE-204ENST00000520493 OR4C12Q96R67 309 aa1.72□□□□□ -2.13
SQLE-204ENST00000520493 PFDN5Q99471 154 aa1.72□□□□□ -2.13
SQLE-204ENST00000520493 RYR2Q92736 4967 aa1.72□□□□□ -2.13
SQLE-204ENST00000520493 USP34Q70CQ2 3546 aa1.72□□□□□ -2.13
SQLE-204ENST00000520493 OVOS2A0A0J9YW53 1432 aa1.72□□□□□ -2.13
SQLE-204ENST00000520493 OVOS2Q6IE36 1432 aa1.72□□□□□ -2.13
SQLE-204ENST00000520493 AKAP13Q12802 2813 aa1.72□□□□□ -2.13
SQLE-204ENST00000520493 PLXNA4Q9HCM2 1894 aa1.71□□□□□ -2.14
SQLE-204ENST00000520493 EFCAB10A6NFE3 127 aa1.71□□□□□ -2.14
SQLE-204ENST00000520493 C5orf58C9J3I9 102 aa1.71□□□□□ -2.14
SQLE-204ENST00000520493 HYPMO75409 117 aa1.71□□□□□ -2.14
SQLE-204ENST00000520493 MT-ND4LP03901 98 aa1.71□□□□□ -2.14
SQLE-204ENST00000520493 CCL4P13236 92 aa1.71□□□□□ -2.14
SQLE-204ENST00000520493 CNBPP62633 177 aaKnown RBP1.71□□□□□ -2.14
SQLE-204ENST00000520493 HIST1H1AQ02539 215 aaPredicted RBP1.71□□□□□ -2.14
SQLE-204ENST00000520493 CIRBPQ14011 172 aaKnown RBP1.71□□□□□ -2.14
SQLE-204ENST00000520493 TMEM244Q5VVB8 128 aa1.71□□□□□ -2.14
SQLE-204ENST00000520493 KRTAP26-1Q6PEX3 210 aa1.71□□□□□ -2.14
SQLE-204ENST00000520493 HAGHLQ6PII5 290 aaPredicted RBP1.71□□□□□ -2.14
SQLE-204ENST00000520493 PSMF1Q92530 271 aa1.71□□□□□ -2.14
SQLE-204ENST00000520493 AP1S3Q96PC3 154 aa1.71□□□□□ -2.14
SQLE-204ENST00000520493 NIT2Q9NQR4 276 aa1.71□□□□□ -2.14
SQLE-204ENST00000520493 CALML5Q9NZT1 146 aa1.71□□□□□ -2.14
SQLE-204ENST00000520493 POLEQ07864 2286 aa1.71□□□□□ -2.14
SQLE-204ENST00000520493 BLMP54132 1417 aaPredicted RBP1.71□□□□□ -2.14
SQLE-204ENST00000520493 NBEAQ8NFP9 2946 aa1.71□□□□□ -2.14
SQLE-204ENST00000520493 MROH2BQ7Z745 1585 aa1.71□□□□□ -2.14
SQLE-204ENST00000520493 LAMA3Q16787 3333 aa1.71□□□□□ -2.14
SQLE-204ENST00000520493 RFX7Q2KHR2 1363 aa1.71□□□□□ -2.14
SQLE-204ENST00000520493 FREM1Q5H8C1 2179 aa1.71□□□□□ -2.14
SQLE-204ENST00000520493 BAZ2BQ9UIF8 2168 aaKnown RBP1.71□□□□□ -2.14
SQLE-204ENST00000520493 ZFC3H1O60293 1989 aaKnown RBP1.7□□□□□ -2.14
SQLE-204ENST00000520493 TANC2Q9HCD6 1990 aa1.7□□□□□ -2.14
SQLE-204ENST00000520493 DIDO1Q9BTC0 2240 aaKnown RBP1.7□□□□□ -2.14
SQLE-204ENST00000520493 KMT2CQ8NEZ4 4911 aaKnown RBP1.7□□□□□ -2.14
SQLE-204ENST00000520493 TRGV2A0A075B6R0 118 aa1.7□□□□□ -2.14
SQLE-204ENST00000520493 LOC107986453A0A1B0GWG9 222 aa1.7□□□□□ -2.14
SQLE-204ENST00000520493 NDUFA2O43678 99 aa1.7□□□□□ -2.14
SQLE-204ENST00000520493 MRPS14O60783 128 aaKnown RBP1.7□□□□□ -2.14
SQLE-204ENST00000520493 TRACP01848 142 aa1.7□□□□□ -2.14
SQLE-204ENST00000520493 HBDP02042 147 aa1.7□□□□□ -2.14
SQLE-204ENST00000520493 HSD17B12Q53GQ0 312 aa1.7□□□□□ -2.14
SQLE-204ENST00000520493 PCOTHQ58A44 107 aa1.7□□□□□ -2.14
SQLE-204ENST00000520493 CLECL1Q8IZS7 167 aa1.7□□□□□ -2.14
SQLE-204ENST00000520493 OR5AS1Q8N127 324 aa1.7□□□□□ -2.14
SQLE-204ENST00000520493 ZNF431Q8TF32 576 aaPredicted RBP1.7□□□□□ -2.14
SQLE-204ENST00000520493 TSC22D3Q99576 134 aa1.7□□□□□ -2.14
SQLE-204ENST00000520493 MED9Q9NWA0 146 aa1.7□□□□□ -2.14
SQLE-204ENST00000520493 TENM2Q9NT68 2774 aa1.7□□□□□ -2.14
SQLE-204ENST00000520493 SOGA1O94964 1423 aa1.69□□□□□ -2.14
SQLE-204ENST00000520493 A0A096LPI6 279 aa1.69□□□□□ -2.14
SQLE-204ENST00000520493 SMIM24O75264 130 aa1.69□□□□□ -2.14
SQLE-204ENST00000520493 TCRAP04437 139 aa1.69□□□□□ -2.14
SQLE-204ENST00000520493 SLC25A5P05141 298 aaKnown RBP1.69□□□□□ -2.14
SQLE-204ENST00000520493 TSPAN19P0C672 248 aa1.69□□□□□ -2.14
SQLE-204ENST00000520493 CXCL8P10145 99 aa1.69□□□□□ -2.14
SQLE-204ENST00000520493 ASB16-AS1Q495Z4 193 aa1.69□□□□□ -2.14
SQLE-204ENST00000520493 GLIPR1L1Q6UWM5 242 aa1.69□□□□□ -2.14
SQLE-204ENST00000520493 Q8N2B8 174 aa1.69□□□□□ -2.14
SQLE-204ENST00000520493 MMGT1Q8N4V1 131 aa1.69□□□□□ -2.14
SQLE-204ENST00000520493 PATE1Q8WXA2 126 aa1.69□□□□□ -2.14
SQLE-204ENST00000520493 CLEC2BQ92478 149 aa1.69□□□□□ -2.14
SQLE-204ENST00000520493 U3KQ87 197 aa1.69□□□□□ -2.14
SQLE-204ENST00000520493 WIZO95785 1651 aa1.69□□□□□ -2.14
SQLE-204ENST00000520493 OTOGLQ3ZCN5 2332 aa1.69□□□□□ -2.14
SQLE-204ENST00000520493 ALPK2Q86TB3 2170 aa1.69□□□□□ -2.14
SQLE-204ENST00000520493 DOCK10Q96BY6 2186 aa1.69□□□□□ -2.14
SQLE-204ENST00000520493 SCN3AQ9NY46 2000 aa1.69□□□□□ -2.14
SQLE-204ENST00000520493 CRYBG3Q68DQ2 2970 aa1.68□□□□□ -2.14
SQLE-204ENST00000520493 MEGF8Q7Z7M0 2845 aa1.68□□□□□ -2.14
SQLE-204ENST00000520493 CEP192Q8TEP8 1941 aa1.68□□□□□ -2.14
SQLE-204ENST00000520493 DISP2A7MBM2 1401 aa1.68□□□□□ -2.14
SQLE-204ENST00000520493 EEA1Q15075 1411 aa1.68□□□□□ -2.14
SQLE-204ENST00000520493 TOP2AP11388 1531 aaKnown RBP1.68□□□□□ -2.14
SQLE-204ENST00000520493 ZNF727A8MUV8 499 aa1.68□□□□□ -2.14
SQLE-204ENST00000520493 ZNF736B4DX44 427 aaPredicted RBP1.68□□□□□ -2.14
SQLE-204ENST00000520493 M0R2Z0 102 aa1.68□□□□□ -2.14
SQLE-204ENST00000520493 GLYATL3Q5SZD4 288 aa1.68□□□□□ -2.14
SQLE-204ENST00000520493 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.68□□□□□ -2.14
SQLE-204ENST00000520493 LINC00269Q8N2A0 174 aa1.68□□□□□ -2.14
SQLE-204ENST00000520493 DEFB123Q8N688 67 aa1.68□□□□□ -2.14
SQLE-204ENST00000520493 OR5AK2Q8NH90 309 aa1.68□□□□□ -2.14
SQLE-204ENST00000520493 GGACTQ9BVM4 153 aa1.68□□□□□ -2.14
SQLE-204ENST00000520493 CST11Q9H112 138 aa1.68□□□□□ -2.14
SQLE-204ENST00000520493 HIVEP3Q5T1R4 2406 aa1.68□□□□□ -2.14
SQLE-204ENST00000520493 CCDC88BA6NC98 1476 aa1.68□□□□□ -2.14
SQLE-204ENST00000520493 COL1A1P02452 1464 aaPredicted RBP1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms