RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 AKR1C8PQ5T2L2 129 aa3.46□□□□□ -1.86
SDCBP-207ENST00000520168 FAM90A2PQ658T7 463 aa3.46□□□□□ -1.86
SDCBP-207ENST00000520168 PRR27Q6MZM9 219 aa3.46□□□□□ -1.86
SDCBP-207ENST00000520168 ZNF818PQ6ZRF7 136 aa3.46□□□□□ -1.86
SDCBP-207ENST00000520168 Q6ZSN1 163 aa3.46□□□□□ -1.86
SDCBP-207ENST00000520168 UBAC2Q8NBM4 344 aa3.46□□□□□ -1.86
SDCBP-207ENST00000520168 CSNK1G2-AS1Q8NCQ2 148 aa3.46□□□□□ -1.86
SDCBP-207ENST00000520168 LSM10Q969L4 123 aaKnown RBP3.46□□□□□ -1.86
SDCBP-207ENST00000520168 ZNF503Q96F45 646 aa3.46□□□□□ -1.86
SDCBP-207ENST00000520168 CYYR1Q96J86 154 aa3.46□□□□□ -1.86
SDCBP-207ENST00000520168 C17orf77Q96MU5 243 aa3.46□□□□□ -1.86
SDCBP-207ENST00000520168 MS4A6AQ9H2W1 248 aa3.46□□□□□ -1.86
SDCBP-207ENST00000520168 CCL28Q9NRJ3 127 aa3.46□□□□□ -1.86
SDCBP-207ENST00000520168 CACFD1Q9UGQ2 172 aa3.46□□□□□ -1.86
SDCBP-207ENST00000520168 LSM5Q9Y4Y9 91 aaKnown RBP3.46□□□□□ -1.86
SDCBP-207ENST00000520168 TMEM218A2RU14 115 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 KRTAP29-1A8MX34 341 aaPredicted RBP3.45□□□□□ -1.86
SDCBP-207ENST00000520168 FAM90A26D6RGX4 464 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 E7EUB6 86 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 H3BTX0 84 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 PITX3O75364 302 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 SEC11BP0C7V7 166 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 FGF7P21781 194 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 TAS2R30P59541 319 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 OCIAD2Q56VL3 154 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 NMSQ5H8A3 153 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 ATRAIDQ6UW56 229 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 C19orf35Q6ZS72 473 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 SLC35G3Q8N808 338 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 OR1P1Q8NH06 330 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 ZNRF2Q8NHG8 242 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 Q8WTZ3 238 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 GPR146Q96CH1 333 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 ZNF414Q96IQ9 312 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 SMIM8Q96KF7 97 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 HSD17B10Q99714 261 aaKnown RBP3.45□□□□□ -1.86
SDCBP-207ENST00000520168 SIGMAR1Q99720 223 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 NIPSNAP3BQ9BS92 247 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 SCRT1Q9BWW7 348 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 QTRT1Q9BXR0 403 aaKnown RBP3.45□□□□□ -1.86
SDCBP-207ENST00000520168 TMEM126AQ9H061 195 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 BET1LQ9NYM9 111 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 C21orf62Q9NYP8 219 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 FAM30AQ9NZY2 134 aa3.45□□□□□ -1.86
SDCBP-207ENST00000520168 IGKV3-7A0A075B6H7 116 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 A0A1W2PS18 150 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 UMAD1C9J7I0 102 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 CRXO43186 299 aaPredicted RBP3.44□□□□□ -1.86
SDCBP-207ENST00000520168 ZNF207O43670 478 aaKnown RBP3.44□□□□□ -1.86
SDCBP-207ENST00000520168 IGLV2-14P01704 120 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 GCSHP23434 173 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 S100A7P31151 101 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 XGP55808 180 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 TCL1AP56279 114 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 CATR1Q13166 79 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 UBE2V1Q13404 147 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 ZNF266Q14584 549 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 LINC01620Q4KN68 170 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 Q56UQ5 140 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 FAM74A1Q5RGS3 127 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 RPL7L1Q6DKI1 246 aaKnown RBP3.44□□□□□ -1.86
SDCBP-207ENST00000520168 LINC01551Q86U37 167 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 GBGT1Q8N5D6 347 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 SMIM20Q8N5G0 67 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 TMEM252Q8N6L7 170 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 OR51H1Q8NH63 302 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 TMED6Q8WW62 240 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 NPIPB3Q92617 1050 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 GNPNAT1Q96EK6 184 aaPredicted RBP3.44□□□□□ -1.86
SDCBP-207ENST00000520168 COMMD5Q9GZQ3 224 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 C11orf1Q9H5F2 150 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 VSIRQ9H7M9 311 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 WFDC1Q9HC57 220 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 DNAJC4Q9NNZ3 241 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 LYRM2Q9NU23 88 aaPredicted RBP3.44□□□□□ -1.86
SDCBP-207ENST00000520168 DKK2Q9UBU2 259 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 RABAC1Q9UI14 185 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 RCL1Q9Y2P8 373 aaKnown RBP3.44□□□□□ -1.86
SDCBP-207ENST00000520168 RFNGQ9Y644 331 aa3.44□□□□□ -1.86
SDCBP-207ENST00000520168 IGHV3OR16-8A0A075B7F1 116 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 IGLC7A0M8Q6 106 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 ZNF705FA8MVS1 300 aaPredicted RBP3.43□□□□□ -1.86
SDCBP-207ENST00000520168 CORTO00230 105 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 RBFOX2O43251 390 aaKnown RBP eCLIP3.43□□□□□ -1.86
SDCBP-207ENST00000520168 TNFSF12O43508 249 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 SYNGR2O43760 224 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 YIF1AO95070 293 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 CTSGP08311 255 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 ZNF705DP0CH99 300 aaPredicted RBP3.43□□□□□ -1.86
SDCBP-207ENST00000520168 ZNF705BP0CI00 300 aaPredicted RBP3.43□□□□□ -1.86
SDCBP-207ENST00000520168 LPAR6P43657 344 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 HBG1P69891 147 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 HBG2P69892 147 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 RPL24P83731 157 aaKnown RBP3.43□□□□□ -1.86
SDCBP-207ENST00000520168 EIF4EBP1Q13541 118 aaPredicted RBP3.43□□□□□ -1.86
SDCBP-207ENST00000520168 PEA15Q15121 130 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 GAGE13Q4V321 117 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 DPPA3Q6W0C5 159 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 ZNF705AQ6ZN79 300 aaPredicted RBP3.43□□□□□ -1.86
SDCBP-207ENST00000520168 VKORC1L1Q8N0U8 176 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms