RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 KLLNB2CW77 178 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 COX7A2P2O60397 106 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 IGHV4-30-4P0DP06 118 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 FGF7P21781 194 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 SEC61GP60059 68 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 FCN2Q15485 313 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 LGALS9BQ3B8N2 356 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 ZFAND6Q6FIF0 208 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 GEMIN7Q9H840 131 aaKnown RBP2.07□□□□□ -2.08
MCF2-208ENST00000519895 MANBALQ9NQG1 85 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 SRRM2Q9UQ35 2752 aaKnown RBP2.06□□□□□ -2.08
MCF2-208ENST00000519895 TRAV8-2A0A0B4J237 113 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 FAM24AA6NFZ4 105 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 IGHV3-11P01762 117 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 IAPPP10997 89 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 TPT1P13693 172 aaKnown RBP2.06□□□□□ -2.08
MCF2-208ENST00000519895 PAX6P26367 422 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 TAS2R60P59551 318 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 CD81P60033 236 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 SNRPEP62304 92 aaKnown RBP2.06□□□□□ -2.08
MCF2-208ENST00000519895 PNRC1Q12796 327 aaPredicted RBP2.06□□□□□ -2.08
MCF2-208ENST00000519895 DAZ2Q13117 558 aaKnown RBP2.06□□□□□ -2.08
MCF2-208ENST00000519895 SLAQ13239 276 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 COTL1Q14019 142 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 HAGHQ16775 308 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 EBLN2Q6P2I7 272 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 GBGT1Q8N5D6 347 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 OR5C1Q8NGR4 320 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 HINT2Q9BX68 163 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 SLC25A2Q9BXI2 301 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 OR51M1Q9H341 326 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 MED9Q9NWA0 146 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 OR5AC2Q9NZP5 309 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 MBD2Q9UBB5 411 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 LINC00527Q9UJ94 153 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 ZFP30Q9Y2G7 519 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 LSM5Q9Y4Y9 91 aaKnown RBP2.06□□□□□ -2.08
MCF2-208ENST00000519895 TNCP24821 2201 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 TRAV26-1A0A087WT03 109 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 NUPR2A6NF83 97 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 REG1AP05451 166 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 METTL15P1P0C7V9 234 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 TFPI2P48307 235 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 SULT1A2P50226 295 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 KRTAP6-3Q3LI67 103 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 SH2D6Q7Z4S9 175 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 C5orf17Q8NAS9 161 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 TMEM37Q8WXS4 190 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 FXYD5Q96DB9 178 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 RCHY1Q96PM5 261 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 PYGO2Q9BRQ0 406 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 GOLT1BQ9Y3E0 138 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 PCP4L1A6NKN8 68 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 F6UZH7 168 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 H7BYZ3 331 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 DNASE2O00115 360 aaPredicted RBP2.06□□□□□ -2.08
MCF2-208ENST00000519895 PRH1P02810 166 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 FRMD6-AS1P0C7T7 363 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 CXCL3P19876 107 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 CAV2P51636 162 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 HERV-K104P63124 156 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 BLOC1S1P78537 153 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 SRSF3P84103 164 aaKnown RBP2.06□□□□□ -2.08
MCF2-208ENST00000519895 SAPCD1Q5SSQ6 148 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 UQCC3Q6UW78 93 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 LINC00305Q7Z4B0 112 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 OR8A1Q8NGG7 326 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 C16orf74Q96GX8 76 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 ACY3Q96HD9 319 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 ZNF479Q96JC4 524 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 AAMDCQ9H7C9 122 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 GSKIPQ9P0R6 139 aa2.06□□□□□ -2.08
MCF2-208ENST00000519895 OXTP01178 125 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 INSP01308 110 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 ATP6V0CP27449 155 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 CSN1S1P47710 185 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 LYZP61626 148 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 HIST1H1AQ02539 215 aaPredicted RBP2.05□□□□□ -2.08
MCF2-208ENST00000519895 ZNF90Q03938 601 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 IZUMO4Q1ZYL8 232 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 DEFB136Q30KP8 78 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 FAM74A3Q4VXF1 159 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 BAP18Q8IXM2 172 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 OR8I2Q8N0Y5 310 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 C15orf53Q8NAA6 179 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 FMC1Q96HJ9 113 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 PAXXQ9BUH6 204 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 WFDC1Q9HC57 220 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 ZNF492Q9P255 531 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 KANTRA0A1W2PQU2 76 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 FAM231BA6NCW3 169 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 CCNKO75909 580 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 NDUFB4O95168 129 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 IFNA1P01562 189 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 GIG44P09565 113 aaPredicted RBP2.05□□□□□ -2.08
MCF2-208ENST00000519895 NBEAP1P0C6P0 100 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 CDC34P49427 236 aaPredicted RBP2.05□□□□□ -2.08
MCF2-208ENST00000519895 RPS20P60866 119 aaKnown RBP2.05□□□□□ -2.08
MCF2-208ENST00000519895 S100A10P60903 97 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 KCNS1Q96KK3 526 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 283.2 ms