RNA–Protein interactions for RNA: ENST00000519480.5

MCPH1-203, Transcript of microcephalin 1, humanhuman

TSL 1 (best) BASIC

Gene MCPH1, Length 2,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-203ENST00000519480 USMG5Q96IX5 58 aa7.67□□□□□ -1.18
MCPH1-203ENST00000519480 LINC00479Q96M42 142 aa7.67□□□□□ -1.18
MCPH1-203ENST00000519480 TMEM167BQ9NRX6 74 aa7.67□□□□□ -1.18
MCPH1-203ENST00000519480 MRPL16Q9NX20 251 aaKnown RBP7.67□□□□□ -1.18
MCPH1-203ENST00000519480 SORL1Q92673 2214 aa7.67□□□□□ -1.18
MCPH1-203ENST00000519480 MAST4O15021 2626 aa7.66□□□□□ -1.18
MCPH1-203ENST00000519480 IGKV3-7A0A075B6H7 116 aa7.66□□□□□ -1.18
MCPH1-203ENST00000519480 TMEM86BQ8N661 226 aa7.66□□□□□ -1.18
MCPH1-203ENST00000519480 YPEL4Q96NS1 127 aa7.66□□□□□ -1.18
MCPH1-203ENST00000519480 PARLQ9H300 379 aa7.66□□□□□ -1.18
MCPH1-203ENST00000519480 A0A0G2JLM5 398 aa7.66□□□□□ -1.18
MCPH1-203ENST00000519480 ZNF727A8MUV8 499 aa7.66□□□□□ -1.18
MCPH1-203ENST00000519480 H3BUA1 57 aa7.66□□□□□ -1.18
MCPH1-203ENST00000519480 FOXL1Q12952 345 aa7.66□□□□□ -1.18
MCPH1-203ENST00000519480 C12orf54Q6X4T0 127 aa7.66□□□□□ -1.18
MCPH1-203ENST00000519480 SMIM7Q9BQ49 75 aa7.66□□□□□ -1.18
MCPH1-203ENST00000519480 HILS1P60008 231 aa7.65□□□□□ -1.18
MCPH1-203ENST00000519480 AWAT1Q58HT5 328 aa7.65□□□□□ -1.18
MCPH1-203ENST00000519480 C6orf226Q5I0X4 101 aa7.65□□□□□ -1.18
MCPH1-203ENST00000519480 Q8N2B8 174 aa7.65□□□□□ -1.18
MCPH1-203ENST00000519480 WIPF2Q8TF74 440 aaPredicted RBP7.65□□□□□ -1.18
MCPH1-203ENST00000519480 IGHV4OR15-8A0A075B7B6 117 aa7.65□□□□□ -1.19
MCPH1-203ENST00000519480 A0A087WW49 117 aa7.65□□□□□ -1.19
MCPH1-203ENST00000519480 PGPA6NDG6 321 aa7.65□□□□□ -1.19
MCPH1-203ENST00000519480 RNASE1P07998 156 aaKnown RBP7.65□□□□□ -1.19
MCPH1-203ENST00000519480 BPIFA4PQ86YQ2 179 aa7.65□□□□□ -1.19
MCPH1-203ENST00000519480 BTF3L4Q96K17 158 aa7.65□□□□□ -1.19
MCPH1-203ENST00000519480 TENM1Q9UKZ4 2725 aa7.64□□□□□ -1.19
MCPH1-203ENST00000519480 HLA-DMBP28068 263 aa7.64□□□□□ -1.19
MCPH1-203ENST00000519480 LINC01006Q8NI28 216 aa7.64□□□□□ -1.19
MCPH1-203ENST00000519480 C1QTNF4Q9BXJ3 329 aa7.64□□□□□ -1.19
MCPH1-203ENST00000519480 SMAD5-AS1Q9Y6J3 95 aa7.64□□□□□ -1.19
MCPH1-203ENST00000519480 TINCRA0A1B0GVN0 87 aa7.64□□□□□ -1.19
MCPH1-203ENST00000519480 C7orf77A4D0Y5 90 aa7.64□□□□□ -1.19
MCPH1-203ENST00000519480 M0R3E3 92 aa7.64□□□□□ -1.19
MCPH1-203ENST00000519480 SLC25A5P05141 298 aaKnown RBP7.64□□□□□ -1.19
MCPH1-203ENST00000519480 CD28P10747 220 aa7.64□□□□□ -1.19
MCPH1-203ENST00000519480 CD33P20138 364 aa7.64□□□□□ -1.19
MCPH1-203ENST00000519480 HSD52Q0P140 79 aa7.64□□□□□ -1.19
MCPH1-203ENST00000519480 METTL26Q96S19 204 aa7.64□□□□□ -1.19
MCPH1-203ENST00000519480 NIPSNAP3BQ9BS92 247 aa7.64□□□□□ -1.19
MCPH1-203ENST00000519480 Q9H3A6 140 aa7.64□□□□□ -1.19
MCPH1-203ENST00000519480 SMDT1Q9H4I9 107 aa7.64□□□□□ -1.19
MCPH1-203ENST00000519480 NAT8Q9UHE5 227 aa7.64□□□□□ -1.19
MCPH1-203ENST00000519480 ATRQ13535 2644 aa7.64□□□□□ -1.19
MCPH1-203ENST00000519480 TRBV20OR9-2A0A075B6H5 130 aa7.63□□□□□ -1.19
MCPH1-203ENST00000519480 GAGE12HA6NDE8 117 aa7.63□□□□□ -1.19
MCPH1-203ENST00000519480 MRPS12O15235 138 aaKnown RBP7.63□□□□□ -1.19
MCPH1-203ENST00000519480 IGLC2P0DOY2 106 aa7.63□□□□□ -1.19
MCPH1-203ENST00000519480 SYNJ2BPP57105 145 aa7.63□□□□□ -1.19
MCPH1-203ENST00000519480 RHEBQ15382 184 aa7.63□□□□□ -1.19
MCPH1-203ENST00000519480 ADIRFQ15847 76 aa7.63□□□□□ -1.19
MCPH1-203ENST00000519480 RPEL1Q2QD12 228 aa7.63□□□□□ -1.19
MCPH1-203ENST00000519480 TMEM78Q5T7P6 136 aa7.63□□□□□ -1.19
MCPH1-203ENST00000519480 OR4F17Q8NGA8 305 aa7.63□□□□□ -1.19
MCPH1-203ENST00000519480 H7BYZ3 331 aa7.63□□□□□ -1.19
MCPH1-203ENST00000519480 BUB3O43684 328 aa7.63□□□□□ -1.19
MCPH1-203ENST00000519480 ELANEP08246 267 aa7.63□□□□□ -1.19
MCPH1-203ENST00000519480 SLURP1P55000 103 aa7.63□□□□□ -1.19
MCPH1-203ENST00000519480 SPAG8Q99932 426 aaPredicted RBP7.63□□□□□ -1.19
MCPH1-203ENST00000519480 ZNF580Q9UK33 172 aa7.63□□□□□ -1.19
MCPH1-203ENST00000519480 C8orf86Q6ZUL3 223 aa7.62□□□□□ -1.19
MCPH1-203ENST00000519480 KLHL30-AS1Q8NEE0 82 aa7.62□□□□□ -1.19
MCPH1-203ENST00000519480 TRAV8-1A0A0A6YYK1 113 aa7.62□□□□□ -1.19
MCPH1-203ENST00000519480 TMEM250H0YL14 139 aa7.62□□□□□ -1.19
MCPH1-203ENST00000519480 LGALS1P09382 135 aaKnown RBP7.62□□□□□ -1.19
MCPH1-203ENST00000519480 TRGC1P0CF51 173 aa7.62□□□□□ -1.19
MCPH1-203ENST00000519480 RPL11P62913 178 aaKnown RBP7.62□□□□□ -1.19
MCPH1-203ENST00000519480 CD300EQ496F6 205 aaPredicted RBP7.62□□□□□ -1.19
MCPH1-203ENST00000519480 FAM162BQ5T6X4 162 aa7.62□□□□□ -1.19
MCPH1-203ENST00000519480 RNF182Q8N6D2 247 aa7.62□□□□□ -1.19
MCPH1-203ENST00000519480 TVP23CQ96ET8 276 aa7.62□□□□□ -1.19
MCPH1-203ENST00000519480 TRBV19A0A075B6N1 114 aa7.62□□□□□ -1.19
MCPH1-203ENST00000519480 NDUFA4O00483 81 aa7.62□□□□□ -1.19
MCPH1-203ENST00000519480 RPL7P18124 248 aaKnown RBP7.62□□□□□ -1.19
MCPH1-203ENST00000519480 NEGR1Q7Z3B1 354 aa7.62□□□□□ -1.19
MCPH1-203ENST00000519480 CTDSP1Q9GZU7 261 aa7.62□□□□□ -1.19
MCPH1-203ENST00000519480 ZNF705FA8MVS1 300 aaPredicted RBP7.61□□□□□ -1.19
MCPH1-203ENST00000519480 HOXD3P31249 432 aaPredicted RBP7.61□□□□□ -1.19
MCPH1-203ENST00000519480 STHQ8IWL8 128 aa7.61□□□□□ -1.19
MCPH1-203ENST00000519480 TMEM183AQ8IXX5 376 aa7.61□□□□□ -1.19
MCPH1-203ENST00000519480 IL17DQ8TAD2 202 aa7.61□□□□□ -1.19
MCPH1-203ENST00000519480 TMEM190Q8WZ59 177 aa7.61□□□□□ -1.19
MCPH1-203ENST00000519480 UBE2E2Q96LR5 201 aa7.61□□□□□ -1.19
MCPH1-203ENST00000519480 SDF2L1Q9HCN8 221 aa7.61□□□□□ -1.19
MCPH1-203ENST00000519480 TMEM14CQ9P0S9 112 aa7.61□□□□□ -1.19
MCPH1-203ENST00000519480 RPL23P62829 140 aaKnown RBP7.61□□□□□ -1.19
MCPH1-203ENST00000519480 MYOZ3Q8TDC0 251 aa7.61□□□□□ -1.19
MCPH1-203ENST00000519480 PEX7O00628 323 aa7.6□□□□□ -1.19
MCPH1-203ENST00000519480 ISLRO14498 428 aa7.6□□□□□ -1.19
MCPH1-203ENST00000519480 CRLF1O75462 422 aa7.6□□□□□ -1.19
MCPH1-203ENST00000519480 MYCNOSP40205 109 aa7.6□□□□□ -1.19
MCPH1-203ENST00000519480 DEFB1P60022 68 aa7.6□□□□□ -1.19
MCPH1-203ENST00000519480 CENPWQ5EE01 88 aa7.6□□□□□ -1.19
MCPH1-203ENST00000519480 AMMECR1LQ6DCA0 310 aa7.6□□□□□ -1.19
MCPH1-203ENST00000519480 GOLT1AQ6ZVE7 132 aa7.6□□□□□ -1.19
MCPH1-203ENST00000519480 RNF114Q9Y508 228 aa7.6□□□□□ -1.19
MCPH1-203ENST00000519480 NOTCH3Q9UM47 2321 aa7.6□□□□□ -1.19
MCPH1-203ENST00000519480 FAM3BP58499 235 aaPredicted RBP7.6□□□□□ -1.19
MCPH1-203ENST00000519480 FAM106AQ4KMX7 169 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms