RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 OR7C2O60412 319 aa6.71□□□□□ -1.34
HDAC3-215ENST00000519474 CST7O76096 145 aa6.71□□□□□ -1.34
HDAC3-215ENST00000519474 AMBPP02760 352 aa6.71□□□□□ -1.34
HDAC3-215ENST00000519474 TYMSP04818 313 aa6.71□□□□□ -1.34
HDAC3-215ENST00000519474 SLC38A11Q08AI6 406 aa6.71□□□□□ -1.34
HDAC3-215ENST00000519474 RHEBQ15382 184 aa6.71□□□□□ -1.34
HDAC3-215ENST00000519474 EBLN2Q6P2I7 272 aa6.71□□□□□ -1.34
HDAC3-215ENST00000519474 CBLN2Q8IUK8 224 aa6.71□□□□□ -1.34
HDAC3-215ENST00000519474 TMEM252Q8N6L7 170 aa6.71□□□□□ -1.34
HDAC3-215ENST00000519474 OCC1Q8TAD7 63 aa6.71□□□□□ -1.34
HDAC3-215ENST00000519474 TMEM37Q8WXS4 190 aa6.71□□□□□ -1.34
HDAC3-215ENST00000519474 MGST2Q99735 147 aa6.71□□□□□ -1.34
HDAC3-215ENST00000519474 LYRM2Q9NU23 88 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-215ENST00000519474 APLNQ9ULZ1 77 aa6.71□□□□□ -1.34
HDAC3-215ENST00000519474 CELA1Q9UNI1 258 aa6.71□□□□□ -1.34
HDAC3-215ENST00000519474 RYR2Q92736 4967 aa6.7□□□□□ -1.34
HDAC3-215ENST00000519474 SMIM9A6NGZ8 99 aa6.7□□□□□ -1.34
HDAC3-215ENST00000519474 IGLL5B9A064 214 aa6.7□□□□□ -1.34
HDAC3-215ENST00000519474 C11orf94C9JXX5 98 aa6.7□□□□□ -1.34
HDAC3-215ENST00000519474 PPP1R2P9O14990 202 aa6.7□□□□□ -1.34
HDAC3-215ENST00000519474 SIX6O95475 246 aa6.7□□□□□ -1.34
HDAC3-215ENST00000519474 RPL7P18124 248 aaKnown RBP6.7□□□□□ -1.34
HDAC3-215ENST00000519474 RAB5AP20339 215 aa6.7□□□□□ -1.34
HDAC3-215ENST00000519474 CAV2P51636 162 aa6.7□□□□□ -1.34
HDAC3-215ENST00000519474 MORN5Q5VZ52 161 aa6.7□□□□□ -1.34
HDAC3-215ENST00000519474 LGALS9CQ6DKI2 356 aa6.7□□□□□ -1.34
HDAC3-215ENST00000519474 Q6ZTC4 211 aa6.7□□□□□ -1.34
HDAC3-215ENST00000519474 RNF182Q8N6D2 247 aa6.7□□□□□ -1.34
HDAC3-215ENST00000519474 MED28Q9H204 178 aa6.7□□□□□ -1.34
HDAC3-215ENST00000519474 PLA2G2EQ9NZK7 142 aa6.7□□□□□ -1.34
HDAC3-215ENST00000519474 IGHV3OR16-12A0A075B7B8 117 aa6.69□□□□□ -1.34
HDAC3-215ENST00000519474 A0A087X0K7 114 aa6.69□□□□□ -1.34
HDAC3-215ENST00000519474 IFITM10A6NMD0 228 aa6.69□□□□□ -1.34
HDAC3-215ENST00000519474 CRXO43186 299 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-215ENST00000519474 PRM2P04554 102 aa6.69□□□□□ -1.34
HDAC3-215ENST00000519474 PRB4P10163 310 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-215ENST00000519474 CXCL3P19876 107 aa6.69□□□□□ -1.34
HDAC3-215ENST00000519474 CNN1P51911 297 aaKnown RBP6.69□□□□□ -1.34
HDAC3-215ENST00000519474 PRR20EP86478 221 aa6.69□□□□□ -1.34
HDAC3-215ENST00000519474 PRR20CP86479 221 aa6.69□□□□□ -1.34
HDAC3-215ENST00000519474 PRR20DP86480 221 aa6.69□□□□□ -1.34
HDAC3-215ENST00000519474 PRR20BP86481 221 aa6.69□□□□□ -1.34
HDAC3-215ENST00000519474 PRR20AP86496 221 aa6.69□□□□□ -1.34
HDAC3-215ENST00000519474 VWC2Q2TAL6 325 aa6.69□□□□□ -1.34
HDAC3-215ENST00000519474 MIC13Q5XKP0 118 aa6.69□□□□□ -1.34
HDAC3-215ENST00000519474 LINC00305Q7Z4B0 112 aa6.69□□□□□ -1.34
HDAC3-215ENST00000519474 HIST3H2BBQ8N257 126 aa6.69□□□□□ -1.34
HDAC3-215ENST00000519474 PHYHIPLQ96FC7 376 aa6.69□□□□□ -1.34
HDAC3-215ENST00000519474 SPANXCQ9NY87 97 aa6.69□□□□□ -1.34
HDAC3-215ENST00000519474 PSG8Q9UQ74 426 aa6.69□□□□□ -1.34
HDAC3-215ENST00000519474 WDR83OSQ9Y284 106 aa6.69□□□□□ -1.34
HDAC3-215ENST00000519474 HYDINQ4G0P3 5121 aa6.69□□□□□ -1.34
HDAC3-215ENST00000519474 TRAV10A0A0B4J240 114 aa6.68□□□□□ -1.34
HDAC3-215ENST00000519474 TRAV5A0A0B4J249 113 aa6.68□□□□□ -1.34
HDAC3-215ENST00000519474 GAGE10A6NGK3 116 aa6.68□□□□□ -1.34
HDAC3-215ENST00000519474 HMSDA8MTL9 139 aa6.68□□□□□ -1.34
HDAC3-215ENST00000519474 INMT-MINDY4F8WBC2 141 aa6.68□□□□□ -1.34
HDAC3-215ENST00000519474 H0YIZ8 118 aa6.68□□□□□ -1.34
HDAC3-215ENST00000519474 DUSP14O95147 198 aaKnown RBP6.68□□□□□ -1.34
HDAC3-215ENST00000519474 IFNA1P01562 189 aa6.68□□□□□ -1.34
HDAC3-215ENST00000519474 RPL29P47914 159 aaKnown RBP6.68□□□□□ -1.34
HDAC3-215ENST00000519474 SULT1A1P50225 295 aa6.68□□□□□ -1.34
HDAC3-215ENST00000519474 TCTAP57738 103 aa6.68□□□□□ -1.34
HDAC3-215ENST00000519474 TIRAPP58753 221 aa6.68□□□□□ -1.34
HDAC3-215ENST00000519474 IQCJQ1A5X6 159 aa6.68□□□□□ -1.34
HDAC3-215ENST00000519474 RPP25LQ8N5L8 163 aaKnown RBP6.68□□□□□ -1.34
HDAC3-215ENST00000519474 OR11H7Q8NGC8 314 aa6.68□□□□□ -1.34
HDAC3-215ENST00000519474 PCNPQ8WW12 178 aaKnown RBP6.68□□□□□ -1.34
HDAC3-215ENST00000519474 IGF2BP2-AS1Q96M15 143 aa6.68□□□□□ -1.34
HDAC3-215ENST00000519474 MIEN1Q9BRT3 115 aa6.68□□□□□ -1.34
HDAC3-215ENST00000519474 RNF126Q9BV68 326 aa6.68□□□□□ -1.34
HDAC3-215ENST00000519474 ZNF331Q9NQX6 463 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-215ENST00000519474 UQCC1Q9NVA1 299 aa6.68□□□□□ -1.34
HDAC3-215ENST00000519474 NAT8Q9UHE5 227 aa6.68□□□□□ -1.34
HDAC3-215ENST00000519474 CSDC2Q9Y534 153 aaKnown RBP6.68□□□□□ -1.34
HDAC3-215ENST00000519474 DNAH1Q9P2D7 4330 aa6.67□□□□□ -1.34
HDAC3-215ENST00000519474 TMEM189A5PLL7 270 aa6.67□□□□□ -1.34
HDAC3-215ENST00000519474 H3BQ15 152 aa6.67□□□□□ -1.34
HDAC3-215ENST00000519474 ORM1P02763 201 aa6.67□□□□□ -1.34
HDAC3-215ENST00000519474 SPART-AS1P0CW21 52 aa6.67□□□□□ -1.34
HDAC3-215ENST00000519474 S100A10P60903 97 aa6.67□□□□□ -1.34
HDAC3-215ENST00000519474 C6orf226Q5I0X4 101 aa6.67□□□□□ -1.34
HDAC3-215ENST00000519474 C10orf113Q5VZT2 155 aa6.67□□□□□ -1.34
HDAC3-215ENST00000519474 Q6ZRG5 221 aa6.67□□□□□ -1.34
HDAC3-215ENST00000519474 BPIFA4PQ86YQ2 179 aa6.67□□□□□ -1.34
HDAC3-215ENST00000519474 OR8A1Q8NGG7 326 aa6.67□□□□□ -1.34
HDAC3-215ENST00000519474 C1orf43Q9BWL3 253 aa6.67□□□□□ -1.34
HDAC3-215ENST00000519474 NMES1Q9C002 83 aa6.67□□□□□ -1.34
HDAC3-215ENST00000519474 DKK2Q9UBU2 259 aa6.67□□□□□ -1.34
HDAC3-215ENST00000519474 RFNGQ9Y644 331 aa6.67□□□□□ -1.34
HDAC3-215ENST00000519474 COX11Q9Y6N1 276 aa6.67□□□□□ -1.34
HDAC3-215ENST00000519474 DEFB131BA0A096LNP1 70 aa6.66□□□□□ -1.34
HDAC3-215ENST00000519474 ZNF705GA8MUZ8 300 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-215ENST00000519474 PRAC2D3DTV9 90 aa6.66□□□□□ -1.34
HDAC3-215ENST00000519474 H3BTX0 84 aa6.66□□□□□ -1.34
HDAC3-215ENST00000519474 M0R2Z0 102 aa6.66□□□□□ -1.34
HDAC3-215ENST00000519474 COX7A2P2O60397 106 aa6.66□□□□□ -1.34
HDAC3-215ENST00000519474 PRAF2O60831 178 aa6.66□□□□□ -1.34
HDAC3-215ENST00000519474 GZMBP10144 247 aa6.66□□□□□ -1.34
HDAC3-215ENST00000519474 AZU1P20160 251 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms