RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 ZNF414Q96IQ9 312 aa4.07□□□□□ -1.76
SQLE-203ENST00000518931 C8orf17Q9NRJ1 99 aa4.07□□□□□ -1.76
SQLE-203ENST00000518931 C21orf62Q9NYP8 219 aa4.07□□□□□ -1.76
SQLE-203ENST00000518931 MYO18AQ92614 2054 aaKnown RBP4.07□□□□□ -1.76
SQLE-203ENST00000518931 AHDC1Q5TGY3 1603 aaPredicted RBP4.06□□□□□ -1.76
SQLE-203ENST00000518931 MEGF6O75095 1541 aa4.06□□□□□ -1.76
SQLE-203ENST00000518931 IGHV5-51A0A0C4DH38 117 aa4.06□□□□□ -1.76
SQLE-203ENST00000518931 A6NIN4 97 aa4.06□□□□□ -1.76
SQLE-203ENST00000518931 BPY2O14599 106 aa4.06□□□□□ -1.76
SQLE-203ENST00000518931 OR1I1O60431 355 aa4.06□□□□□ -1.76
SQLE-203ENST00000518931 MT-ND6P03923 174 aa4.06□□□□□ -1.76
SQLE-203ENST00000518931 SLC25A5P05141 298 aaKnown RBP4.06□□□□□ -1.76
SQLE-203ENST00000518931 NPPCP23582 126 aa4.06□□□□□ -1.76
SQLE-203ENST00000518931 LGALS9BQ3B8N2 356 aa4.06□□□□□ -1.76
SQLE-203ENST00000518931 FAM78AQ5JUQ0 283 aa4.06□□□□□ -1.76
SQLE-203ENST00000518931 ZNF678Q5SXM1 525 aa4.06□□□□□ -1.76
SQLE-203ENST00000518931 LGALS9CQ6DKI2 356 aa4.06□□□□□ -1.76
SQLE-203ENST00000518931 MORN4Q8NDC4 146 aa4.06□□□□□ -1.76
SQLE-203ENST00000518931 NPCDR1Q9BY65 106 aa4.06□□□□□ -1.76
SQLE-203ENST00000518931 CST11Q9H112 138 aa4.06□□□□□ -1.76
SQLE-203ENST00000518931 OSTCQ9NRP0 149 aa4.06□□□□□ -1.76
SQLE-203ENST00000518931 ZNF835Q9Y2P0 537 aa4.06□□□□□ -1.76
SQLE-203ENST00000518931 TRAPPC1Q9Y5R8 145 aa4.06□□□□□ -1.76
SQLE-203ENST00000518931 DNAJC15Q9Y5T4 150 aa4.06□□□□□ -1.76
SQLE-203ENST00000518931 NUP205Q92621 2012 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 EML6Q6ZMW3 1958 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 COL1A1P02452 1464 aaPredicted RBP4.05□□□□□ -1.76
SQLE-203ENST00000518931 TRPM7Q96QT4 1865 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 MAST2Q6P0Q8 1798 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 IGLV11-55A0A075B6I3 123 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 IGLV3-10A0A075B6K4 115 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 IGHV3-21A0A0B4J1V1 117 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 TRAV1-1A0A0B4J248 108 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 IGKV1-9A0A0C4DH69 117 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 H3BUT2 72 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 GYPAP02724 150 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 MDKP21741 143 aaPredicted RBP4.05□□□□□ -1.76
SQLE-203ENST00000518931 KRTDAPP60985 99 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 FUT5Q11128 374 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 C9orf153Q5TBE3 101 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 ZNF322Q6U7Q0 402 aaPredicted RBP4.05□□□□□ -1.76
SQLE-203ENST00000518931 BPIFA4PQ86YQ2 179 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 C20orf203Q8NBC4 194 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 WFDC11Q8NEX6 87 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 WFDC5Q8TCV5 224 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 ZNF714Q96N38 554 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 PLA2G2FQ9BZM2 168 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 AGPAT4-IT1Q9H0P7 198 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 RPP21Q9H633 154 aaKnown RBP4.05□□□□□ -1.76
SQLE-203ENST00000518931 CMC2Q9NRP2 79 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 TP53TG3Q9ULZ0 132 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 CELA1Q9UNI1 258 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 SCN7AQ01118 1682 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 HELZP42694 1942 aaKnown RBP4.05□□□□□ -1.76
SQLE-203ENST00000518931 OBSL1O75147 1896 aa4.05□□□□□ -1.76
SQLE-203ENST00000518931 SIPA1L3O60292 1781 aaPredicted RBP4.04□□□□□ -1.76
SQLE-203ENST00000518931 COL14A1Q05707 1796 aaKnown RBP4.04□□□□□ -1.76
SQLE-203ENST00000518931 BCORQ6W2J9 1755 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 DSCAML1Q8TD84 2053 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 NRAPQ86VF7 1730 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 WDR90Q96KV7 1748 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 TET2Q6N021 2002 aaPredicted RBP4.04□□□□□ -1.76
SQLE-203ENST00000518931 TRBV20-1A0A075B6N2 111 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 C3orf85A0A1B0GTC6 90 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 ZNF736B4DX44 427 aaPredicted RBP4.04□□□□□ -1.76
SQLE-203ENST00000518931 LEPROTO15243 131 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 HCRTO43612 131 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 SYNGR2O43760 224 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 ZNF737O75373 536 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 HBDP02042 147 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 C3orf79P0CE67 100 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 FXYD7P58549 80 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 LUZP6Q538Z0 58 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 FAM104BQ5XKR9 115 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 SPATA12Q7Z6I5 190 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 AMN1Q8IY45 258 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 ZNF525Q8N782 197 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 OR4X2Q8NGF9 303 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 GTSF1Q8WW33 167 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 LINC00526Q96FQ7 95 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 PRR34Q9NV39 138 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 EPDR1Q9UM22 224 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 TSC2P49815 1807 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 PATJQ8NI35 1801 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 ATG2BQ96BY7 2078 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 MYO10Q9HD67 2058 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 DOT1LQ8TEK3 1739 aa4.04□□□□□ -1.76
SQLE-203ENST00000518931 BTAF1O14981 1849 aa4.03□□□□□ -1.76
SQLE-203ENST00000518931 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
SQLE-203ENST00000518931 SYS1-DBNDD2H3BUS1 97 aa4.03□□□□□ -1.76
SQLE-203ENST00000518931 PITX3O75364 302 aa4.03□□□□□ -1.76
SQLE-203ENST00000518931 APCSP02743 223 aa4.03□□□□□ -1.76
SQLE-203ENST00000518931 PRH1P02810 166 aa4.03□□□□□ -1.76
SQLE-203ENST00000518931 RNASE4P34096 147 aaKnown RBP4.03□□□□□ -1.76
SQLE-203ENST00000518931 ASIPP42127 132 aa4.03□□□□□ -1.76
SQLE-203ENST00000518931 LYZP61626 148 aa4.03□□□□□ -1.76
SQLE-203ENST00000518931 SNRPFP62306 86 aaKnown RBP4.03□□□□□ -1.76
SQLE-203ENST00000518931 SNRPD3P62318 126 aaKnown RBP4.03□□□□□ -1.76
SQLE-203ENST00000518931 MRPL51Q4U2R6 128 aaKnown RBP4.03□□□□□ -1.76
SQLE-203ENST00000518931 CYP2G1PQ6ZSU1 146 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms