RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 FAM110DQ8TAY7 271 aaPredicted RBP12.74□□□□□ -0.37
PCDHGA11-202ENST00000518882 TMEM158Q8WZ71 300 aa12.74□□□□□ -0.37
PCDHGA11-202ENST00000518882 CCDC140Q96MF4 163 aa12.74□□□□□ -0.37
PCDHGA11-202ENST00000518882 COL25A1Q9BXS0 654 aaPredicted RBP12.74□□□□□ -0.37
PCDHGA11-202ENST00000518882 AGPAT4-IT1Q9H0P7 198 aa12.74□□□□□ -0.37
PCDHGA11-202ENST00000518882 IGLV2-18A0A075B6J9 118 aa12.74□□□□□ -0.37
PCDHGA11-202ENST00000518882 LINC01548A6NM66 108 aa12.74□□□□□ -0.37
PCDHGA11-202ENST00000518882 K7EP34 96 aa12.74□□□□□ -0.37
PCDHGA11-202ENST00000518882 GTF2H5Q6ZYL4 71 aa12.74□□□□□ -0.37
PCDHGA11-202ENST00000518882 AJUBAQ96IF1 538 aa12.74□□□□□ -0.37
PCDHGA11-202ENST00000518882 TRAV8-2A0A0B4J237 113 aa12.73□□□□□ -0.37
PCDHGA11-202ENST00000518882 RBAKDNA6NC62 111 aa12.73□□□□□ -0.37
PCDHGA11-202ENST00000518882 PRSS1P07477 247 aa12.73□□□□□ -0.37
PCDHGA11-202ENST00000518882 CLEC19AQ6UXS0 136 aa12.73□□□□□ -0.37
PCDHGA11-202ENST00000518882 PIFOQ8TCI5 191 aa12.73□□□□□ -0.37
PCDHGA11-202ENST00000518882 SIRPDQ9H106 197 aa12.73□□□□□ -0.37
PCDHGA11-202ENST00000518882 SPTBN1Q01082 2364 aaKnown RBP12.73□□□□□ -0.37
PCDHGA11-202ENST00000518882 G3V318 75 aa12.73□□□□□ -0.37
PCDHGA11-202ENST00000518882 ZNF207O43670 478 aaKnown RBP12.73□□□□□ -0.37
PCDHGA11-202ENST00000518882 TRAV26-2A0A0B4J265 109 aa12.72□□□□□ -0.37
PCDHGA11-202ENST00000518882 K7ERU9 68 aa12.72□□□□□ -0.37
PCDHGA11-202ENST00000518882 OR2K2Q8NGT1 345 aa12.72□□□□□ -0.37
PCDHGA11-202ENST00000518882 FOXC2Q99958 501 aa12.72□□□□□ -0.37
PCDHGA11-202ENST00000518882 IGF2RP11717 2491 aa12.72□□□□□ -0.37
PCDHGA11-202ENST00000518882 IGHV7-4-1A0A0J9YVY3 117 aa12.72□□□□□ -0.37
PCDHGA11-202ENST00000518882 IGKCP01834 107 aa12.72□□□□□ -0.37
PCDHGA11-202ENST00000518882 COTL1Q14019 142 aa12.72□□□□□ -0.37
PCDHGA11-202ENST00000518882 Q8N8P6 123 aa12.72□□□□□ -0.37
PCDHGA11-202ENST00000518882 CELSR1Q9NYQ6 3014 aa12.71□□□□□ -0.37
PCDHGA11-202ENST00000518882 A0A1W2PPM0 123 aa12.71□□□□□ -0.37
PCDHGA11-202ENST00000518882 S100A7P31151 101 aa12.71□□□□□ -0.37
PCDHGA11-202ENST00000518882 NBL1P41271 181 aa12.71□□□□□ -0.37
PCDHGA11-202ENST00000518882 FXYD2P54710 66 aa12.71□□□□□ -0.37
PCDHGA11-202ENST00000518882 GTSCR1Q86UQ5 136 aa12.71□□□□□ -0.37
PCDHGA11-202ENST00000518882 SLC50A1Q9BRV3 221 aa12.71□□□□□ -0.37
PCDHGA11-202ENST00000518882 MEGF9Q9H1U4 602 aa12.71□□□□□ -0.37
PCDHGA11-202ENST00000518882 A0A1W2PPR1 153 aa12.71□□□□□ -0.38
PCDHGA11-202ENST00000518882 GOSR1O95249 250 aa12.71□□□□□ -0.38
PCDHGA11-202ENST00000518882 GCSHP23434 173 aa12.7□□□□□ -0.38
PCDHGA11-202ENST00000518882 RAB9AP51151 201 aa12.7□□□□□ -0.38
PCDHGA11-202ENST00000518882 NRACQ8N912 160 aa12.7□□□□□ -0.38
PCDHGA11-202ENST00000518882 TMEM8BA6NDV4 472 aa12.69□□□□□ -0.38
PCDHGA11-202ENST00000518882 SMIM17P0DL12 118 aa12.69□□□□□ -0.38
PCDHGA11-202ENST00000518882 KLK9Q2XQG4 91 aa12.69□□□□□ -0.38
PCDHGA11-202ENST00000518882 C8orf86Q6ZUL3 223 aa12.69□□□□□ -0.38
PCDHGA11-202ENST00000518882 CHAC1Q9BUX1 264 aa12.69□□□□□ -0.38
PCDHGA11-202ENST00000518882 KLK9Q9UKQ9 250 aa12.69□□□□□ -0.38
PCDHGA11-202ENST00000518882 AKAP6Q13023 2319 aa12.69□□□□□ -0.38
PCDHGA11-202ENST00000518882 ZC2HC1BQ5TFG8 222 aa12.69□□□□□ -0.38
PCDHGA11-202ENST00000518882 COL6A6A6NMZ7 2263 aa12.69□□□□□ -0.38
PCDHGA11-202ENST00000518882 TRBV25-1A0A075B6N4 114 aa12.68□□□□□ -0.38
PCDHGA11-202ENST00000518882 SAA4P35542 130 aa12.68□□□□□ -0.38
PCDHGA11-202ENST00000518882 TMEM78Q5T7P6 136 aa12.68□□□□□ -0.38
PCDHGA11-202ENST00000518882 HIGD1BQ9P298 99 aa12.68□□□□□ -0.38
PCDHGA11-202ENST00000518882 UFC1Q9Y3C8 167 aa12.68□□□□□ -0.38
PCDHGA11-202ENST00000518882 SPCS1Q9Y6A9 102 aa12.68□□□□□ -0.38
PCDHGA11-202ENST00000518882 K7ERJ3 54 aa12.68□□□□□ -0.38
PCDHGA11-202ENST00000518882 DPM2O94777 84 aa12.68□□□□□ -0.38
PCDHGA11-202ENST00000518882 MRPL35Q9NZE8 188 aaKnown RBP12.68□□□□□ -0.38
PCDHGA11-202ENST00000518882 AGRNO00468 2067 aa12.67□□□□□ -0.38
PCDHGA11-202ENST00000518882 TRAV40A0A0B4J280 105 aa12.67□□□□□ -0.38
PCDHGA11-202ENST00000518882 PRR9Q5T870 116 aa12.67□□□□□ -0.38
PCDHGA11-202ENST00000518882 TMEM160Q9NX00 188 aa12.67□□□□□ -0.38
PCDHGA11-202ENST00000518882 VPS13CQ709C8 3753 aa12.67□□□□□ -0.38
PCDHGA11-202ENST00000518882 K7EMI3 77 aa12.67□□□□□ -0.38
PCDHGA11-202ENST00000518882 ATP5LO75964 103 aa12.67□□□□□ -0.38
PCDHGA11-202ENST00000518882 SMIM13P0DJ93 91 aa12.67□□□□□ -0.38
PCDHGA11-202ENST00000518882 UBE2E1P51965 193 aa12.67□□□□□ -0.38
PCDHGA11-202ENST00000518882 SMIM15Q7Z3B0 74 aa12.67□□□□□ -0.38
PCDHGA11-202ENST00000518882 CSTL1Q9H114 145 aa12.67□□□□□ -0.38
PCDHGA11-202ENST00000518882 LAGE3Q14657 143 aa12.66□□□□□ -0.38
PCDHGA11-202ENST00000518882 NEGR1Q7Z3B1 354 aa12.66□□□□□ -0.38
PCDHGA11-202ENST00000518882 PRSS47A8MTI9 375 aa12.65□□□□□ -0.38
PCDHGA11-202ENST00000518882 IGF1P05019 195 aa12.65□□□□□ -0.38
PCDHGA11-202ENST00000518882 SAMD5Q5TGI4 173 aa12.65□□□□□ -0.38
PCDHGA11-202ENST00000518882 C9orf47Q6ZRZ4 202 aa12.65□□□□□ -0.38
PCDHGA11-202ENST00000518882 EEF1AKMT3Q96AZ1 226 aa12.65□□□□□ -0.38
PCDHGA11-202ENST00000518882 METTL26Q96S19 204 aa12.65□□□□□ -0.38
PCDHGA11-202ENST00000518882 SMPXQ9UHP9 88 aa12.65□□□□□ -0.38
PCDHGA11-202ENST00000518882 EFNA4P52798 201 aa12.65□□□□□ -0.38
PCDHGA11-202ENST00000518882 RIPPLY3P57055 190 aa12.65□□□□□ -0.38
PCDHGA11-202ENST00000518882 MAPKAPK5-AS1Q8N8E1 139 aa12.65□□□□□ -0.38
PCDHGA11-202ENST00000518882 PHLDA1Q8WV24 401 aaPredicted RBP12.65□□□□□ -0.38
PCDHGA11-202ENST00000518882 U3KQE9 123 aa12.65□□□□□ -0.38
PCDHGA11-202ENST00000518882 G3V4G9 280 aa12.64□□□□□ -0.39
PCDHGA11-202ENST00000518882 H3BVH4 76 aa12.64□□□□□ -0.39
PCDHGA11-202ENST00000518882 SPRY2O43597 315 aa12.64□□□□□ -0.39
PCDHGA11-202ENST00000518882 FABP2P12104 132 aa12.64□□□□□ -0.39
PCDHGA11-202ENST00000518882 PSMG4Q5JS54 123 aa12.64□□□□□ -0.39
PCDHGA11-202ENST00000518882 SPANXN1Q5VSR9 72 aa12.64□□□□□ -0.39
PCDHGA11-202ENST00000518882 MRPL53Q96EL3 112 aaKnown RBP12.64□□□□□ -0.39
PCDHGA11-202ENST00000518882 CENPVL3A0A0U1RRI6 287 aa12.64□□□□□ -0.39
PCDHGA11-202ENST00000518882 OR5A1Q8NGJ0 315 aa12.64□□□□□ -0.39
PCDHGA11-202ENST00000518882 C20orf173Q96LM9 149 aa12.64□□□□□ -0.39
PCDHGA11-202ENST00000518882 HIVEP3Q5T1R4 2406 aa12.64□□□□□ -0.39
PCDHGA11-202ENST00000518882 IGHV4-4A0A075B6R2 117 aa12.63□□□□□ -0.39
PCDHGA11-202ENST00000518882 TRBV7-1A0A0A6YYK4 115 aa12.63□□□□□ -0.39
PCDHGA11-202ENST00000518882 MYOZ3Q8TDC0 251 aa12.63□□□□□ -0.39
PCDHGA11-202ENST00000518882 J3KRW8 73 aa12.63□□□□□ -0.39
PCDHGA11-202ENST00000518882 C5orf56Q8N8D9 126 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms