RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 GAGE12IP0CL82 117 aa13.18□□□□□ -0.3
FAM49B-208ENST00000518344 SUMO1P63165 101 aaKnown RBP13.18□□□□□ -0.3
FAM49B-208ENST00000518344 ZNF726P1Q15940 193 aa13.18□□□□□ -0.3
FAM49B-208ENST00000518344 ARL6IP6Q8N6S5 226 aa13.18□□□□□ -0.3
FAM49B-208ENST00000518344 LINC00467Q9BRT7 94 aa13.18□□□□□ -0.3
FAM49B-208ENST00000518344 TRAV8-1A0A0A6YYK1 113 aa13.17□□□□□ -0.3
FAM49B-208ENST00000518344 P0DMU3 169 aa13.17□□□□□ -0.3
FAM49B-208ENST00000518344 FAM231AP0DMU4 169 aa13.17□□□□□ -0.3
FAM49B-208ENST00000518344 FAM231CP0DMU5 169 aa13.17□□□□□ -0.3
FAM49B-208ENST00000518344 ZNF345Q14585 488 aa13.17□□□□□ -0.3
FAM49B-208ENST00000518344 ANXA2RQ3ZCQ2 193 aa13.17□□□□□ -0.3
FAM49B-208ENST00000518344 TMED6Q8WW62 240 aa13.17□□□□□ -0.3
FAM49B-208ENST00000518344 TP53TG3Q9ULZ0 132 aa13.17□□□□□ -0.3
FAM49B-208ENST00000518344 LENEPQ9Y5L5 61 aa13.17□□□□□ -0.3
FAM49B-208ENST00000518344 VPS13DQ5THJ4 4388 aa13.17□□□□□ -0.3
FAM49B-208ENST00000518344 A0A0D9SG52 128 aa13.16□□□□□ -0.3
FAM49B-208ENST00000518344 FGF8P55075 233 aaPredicted RBP13.16□□□□□ -0.3
FAM49B-208ENST00000518344 MUC21Q5SSG8 566 aa13.16□□□□□ -0.3
FAM49B-208ENST00000518344 C5orf17Q8NAS9 161 aa13.16□□□□□ -0.3
FAM49B-208ENST00000518344 SGK494Q96LW2 274 aa13.16□□□□□ -0.3
FAM49B-208ENST00000518344 TMPRSS5Q9H3S3 457 aa13.16□□□□□ -0.3
FAM49B-208ENST00000518344 KMT2AQ03164 3969 aa13.16□□□□□ -0.3
FAM49B-208ENST00000518344 KANTRA0A1W2PQU2 76 aa13.15□□□□□ -0.3
FAM49B-208ENST00000518344 TCRAP04437 139 aa13.15□□□□□ -0.3
FAM49B-208ENST00000518344 DAZ2Q13117 558 aaKnown RBP13.15□□□□□ -0.3
FAM49B-208ENST00000518344 Q6ZTI0 123 aa13.15□□□□□ -0.3
FAM49B-208ENST00000518344 LINC00612Q8N6U2 182 aa13.15□□□□□ -0.3
FAM49B-208ENST00000518344 C11orf72Q8NBR9 251 aa13.15□□□□□ -0.3
FAM49B-208ENST00000518344 ZNF471Q9BX82 626 aaPredicted RBP13.15□□□□□ -0.3
FAM49B-208ENST00000518344 EPDR1Q9UM22 224 aa13.15□□□□□ -0.3
FAM49B-208ENST00000518344 KLF12Q9Y4X4 402 aa13.15□□□□□ -0.3
FAM49B-208ENST00000518344 K7EQM0 130 aa13.14□□□□□ -0.31
FAM49B-208ENST00000518344 UBE2G2P60604 165 aa13.14□□□□□ -0.31
FAM49B-208ENST00000518344 OR5I1Q13606 314 aa13.14□□□□□ -0.31
FAM49B-208ENST00000518344 UBE2DNLQ8IWF7 75 aa13.14□□□□□ -0.31
FAM49B-208ENST00000518344 TREM1Q9NP99 234 aa13.14□□□□□ -0.31
FAM49B-208ENST00000518344 TRGV1A0A0A0MS02 117 aa13.13□□□□□ -0.31
FAM49B-208ENST00000518344 SERTM2A0A1B0GWG4 89 aa13.13□□□□□ -0.31
FAM49B-208ENST00000518344 A0A1W2PRE2 83 aa13.13□□□□□ -0.31
FAM49B-208ENST00000518344 GGTLC3B5MD39 225 aa13.13□□□□□ -0.31
FAM49B-208ENST00000518344 F6UZH7 168 aa13.13□□□□□ -0.31
FAM49B-208ENST00000518344 BCL2L11O43521 198 aa13.13□□□□□ -0.31
FAM49B-208ENST00000518344 IBA57Q5T440 356 aaKnown RBP13.13□□□□□ -0.31
FAM49B-208ENST00000518344 Q6AWC8 147 aa13.13□□□□□ -0.31
FAM49B-208ENST00000518344 POM121L12Q8N7R1 296 aa13.13□□□□□ -0.31
FAM49B-208ENST00000518344 TVP23CQ96ET8 276 aa13.13□□□□□ -0.31
FAM49B-208ENST00000518344 NAGKQ9UJ70 344 aa13.13□□□□□ -0.31
FAM49B-208ENST00000518344 TRGV2A0A075B6R0 118 aa13.12□□□□□ -0.31
FAM49B-208ENST00000518344 MAP1LC3B2A6NCE7 125 aa13.12□□□□□ -0.31
FAM49B-208ENST00000518344 PFDN1O60925 122 aa13.12□□□□□ -0.31
FAM49B-208ENST00000518344 NUDT3O95989 172 aa13.12□□□□□ -0.31
FAM49B-208ENST00000518344 IFNA7P01567 189 aa13.12□□□□□ -0.31
FAM49B-208ENST00000518344 TCL1AP56279 114 aa13.12□□□□□ -0.31
FAM49B-208ENST00000518344 FAM159AQ6UWV7 190 aa13.12□□□□□ -0.31
FAM49B-208ENST00000518344 TMUB2Q71RG4 321 aa13.12□□□□□ -0.31
FAM49B-208ENST00000518344 C15orf53Q8NAA6 179 aa13.12□□□□□ -0.31
FAM49B-208ENST00000518344 NDFIP1Q9BT67 221 aa13.12□□□□□ -0.31
FAM49B-208ENST00000518344 MAP1LC3BQ9GZQ8 125 aa13.12□□□□□ -0.31
FAM49B-208ENST00000518344 SEC11BP0C7V7 166 aa13.11□□□□□ -0.31
FAM49B-208ENST00000518344 FHITP49789 147 aa13.11□□□□□ -0.31
FAM49B-208ENST00000518344 ZNF415Q09FC8 603 aa13.11□□□□□ -0.31
FAM49B-208ENST00000518344 PRNTQ86SH4 94 aa13.11□□□□□ -0.31
FAM49B-208ENST00000518344 PSG8Q9UQ74 426 aa13.11□□□□□ -0.31
FAM49B-208ENST00000518344 TRAV21A0A0B4J279 112 aa13.1□□□□□ -0.31
FAM49B-208ENST00000518344 SPINK4O60575 86 aa13.1□□□□□ -0.31
FAM49B-208ENST00000518344 TMEM183BQ1AE95 376 aa13.1□□□□□ -0.31
FAM49B-208ENST00000518344 Q6ZNX1 250 aa13.1□□□□□ -0.31
FAM49B-208ENST00000518344 TMEM183AQ8IXX5 376 aa13.1□□□□□ -0.31
FAM49B-208ENST00000518344 CYB561D1Q8N8Q1 229 aa13.1□□□□□ -0.31
FAM49B-208ENST00000518344 STOML3Q8TAV4 291 aa13.1□□□□□ -0.31
FAM49B-208ENST00000518344 MDFICQ9P1T7 246 aa13.1□□□□□ -0.31
FAM49B-208ENST00000518344 FAM74A7A6NL05 159 aa13.09□□□□□ -0.31
FAM49B-208ENST00000518344 HOXA5P20719 270 aa13.09□□□□□ -0.31
FAM49B-208ENST00000518344 EIF5AP63241 154 aaKnown RBP13.09□□□□□ -0.31
FAM49B-208ENST00000518344 FLI1Q01543 452 aaPredicted RBP13.09□□□□□ -0.31
FAM49B-208ENST00000518344 FAM213BQ8TBF2 198 aa13.09□□□□□ -0.31
FAM49B-208ENST00000518344 ATG101Q9BSB4 218 aa13.09□□□□□ -0.31
FAM49B-208ENST00000518344 MRPL16Q9NX20 251 aaKnown RBP13.09□□□□□ -0.31
FAM49B-208ENST00000518344 TRGV11A0A075B6L2 103 aa13.08□□□□□ -0.32
FAM49B-208ENST00000518344 TRAV26-1A0A087WT03 109 aa13.08□□□□□ -0.32
FAM49B-208ENST00000518344 A0A0J9YY99 117 aa13.08□□□□□ -0.32
FAM49B-208ENST00000518344 UMAD1C9J7I0 102 aa13.08□□□□□ -0.32
FAM49B-208ENST00000518344 TMEM75Q8N9X5 138 aa13.08□□□□□ -0.32
FAM49B-208ENST00000518344 LINC00479Q96M42 142 aa13.08□□□□□ -0.32
FAM49B-208ENST00000518344 C8orf49Q96NF6 230 aa13.08□□□□□ -0.32
FAM49B-208ENST00000518344 TRAV34A0A0B4J273 112 aa13.07□□□□□ -0.32
FAM49B-208ENST00000518344 GNRH2O43555 120 aa13.07□□□□□ -0.32
FAM49B-208ENST00000518344 IGLV2-11P01706 119 aa13.07□□□□□ -0.32
FAM49B-208ENST00000518344 LGALS9BQ3B8N2 356 aa13.07□□□□□ -0.32
FAM49B-208ENST00000518344 RNF212Q495C1 297 aa13.07□□□□□ -0.32
FAM49B-208ENST00000518344 TCTE3Q8IZS6 198 aa13.07□□□□□ -0.32
FAM49B-208ENST00000518344 SFT2D1Q8WV19 159 aa13.07□□□□□ -0.32
FAM49B-208ENST00000518344 NKX6-2Q9C056 277 aaPredicted RBP13.07□□□□□ -0.32
FAM49B-208ENST00000518344 hCG_2014768A0A024R1R8 64 aa13.06□□□□□ -0.32
FAM49B-208ENST00000518344 A0A1B0GV50 99 aa13.06□□□□□ -0.32
FAM49B-208ENST00000518344 FBLL1A6NHQ2 334 aaKnown RBP13.06□□□□□ -0.32
FAM49B-208ENST00000518344 GCGP01275 180 aa13.06□□□□□ -0.32
FAM49B-208ENST00000518344 IGHV3-53P01767 116 aa13.06□□□□□ -0.32
FAM49B-208ENST00000518344 TPT1P13693 172 aaKnown RBP13.06□□□□□ -0.32
FAM49B-208ENST00000518344 TDRG1Q3Y452 100 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms