RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 SRD5A1P18405 259 aa20.09■□□□□ 0.81
COL13A1-210ENST00000517713 SSTP61278 116 aa20.09■□□□□ 0.81
COL13A1-210ENST00000517713 REC114Q7Z4M0 266 aa20.08■□□□□ 0.8
COL13A1-210ENST00000517713 ITPR3Q14573 2671 aa20.07■□□□□ 0.8
COL13A1-210ENST00000517713 MUC21A0A0G2JKD1 596 aa20.07■□□□□ 0.8
COL13A1-210ENST00000517713 MUC21A0A140T8X8 626 aa20.07■□□□□ 0.8
COL13A1-210ENST00000517713 CD33P20138 364 aa20.07■□□□□ 0.8
COL13A1-210ENST00000517713 MUC21Q5SSG8 566 aa20.07■□□□□ 0.8
COL13A1-210ENST00000517713 NIT1Q86X76 327 aa20.07■□□□□ 0.8
COL13A1-210ENST00000517713 ZNF469Q96JG9 3925 aaPredicted RBP20.06■□□□□ 0.8
COL13A1-210ENST00000517713 LGALS9O00182 355 aa20.06■□□□□ 0.8
COL13A1-210ENST00000517713 SYNJ2BPP57105 145 aa20.06■□□□□ 0.8
COL13A1-210ENST00000517713 RNASEKQ6P5S7 137 aaKnown RBP20.06■□□□□ 0.8
COL13A1-210ENST00000517713 FAM19A2Q8N3H0 131 aa20.06■□□□□ 0.8
COL13A1-210ENST00000517713 C11orf21Q9P2W6 132 aa20.06■□□□□ 0.8
COL13A1-210ENST00000517713 NAGKQ9UJ70 344 aa20.06■□□□□ 0.8
COL13A1-210ENST00000517713 IGKV3D-20A0A0C4DH25 116 aa20.05■□□□□ 0.8
COL13A1-210ENST00000517713 KLHDC1Q8N7A1 406 aa20.05■□□□□ 0.8
COL13A1-210ENST00000517713 HSBP1O75506 76 aa20.05■□□□□ 0.8
COL13A1-210ENST00000517713 DEFB1P60022 68 aa20.05■□□□□ 0.8
COL13A1-210ENST00000517713 SAMD13Q5VXD3 122 aa20.05■□□□□ 0.8
COL13A1-210ENST00000517713 PDZD2O15018 2839 aa20.05■□□□□ 0.8
COL13A1-210ENST00000517713 NTF3P20783 257 aa20.04■□□□□ 0.8
COL13A1-210ENST00000517713 HOXD3P31249 432 aaPredicted RBP20.04■□□□□ 0.8
COL13A1-210ENST00000517713 ID1P41134 155 aa20.04■□□□□ 0.8
COL13A1-210ENST00000517713 KRTAP1-1Q07627 177 aa20.04■□□□□ 0.8
COL13A1-210ENST00000517713 TWIST1Q15672 202 aa20.04■□□□□ 0.8
COL13A1-210ENST00000517713 OR8A1Q8NGG7 326 aa20.04■□□□□ 0.8
COL13A1-210ENST00000517713 DCANP1Q8TF63 244 aa20.04■□□□□ 0.8
COL13A1-210ENST00000517713 LINC00587B1AMM8 73 aa20.03■□□□□ 0.8
COL13A1-210ENST00000517713 CD5LO43866 347 aa20.03■□□□□ 0.8
COL13A1-210ENST00000517713 URB1-AS1Q96HZ7 61 aa20.03■□□□□ 0.8
COL13A1-210ENST00000517713 PRR9Q5T870 116 aa20.03■□□□□ 0.8
COL13A1-210ENST00000517713 DNAJC9-AS1A6NH13 148 aa20.02■□□□□ 0.8
COL13A1-210ENST00000517713 F6UB75 175 aa20.02■□□□□ 0.8
COL13A1-210ENST00000517713 WFDC3Q8IUB2 231 aa20.02■□□□□ 0.8
COL13A1-210ENST00000517713 CNFNQ9BYD5 112 aa20.02■□□□□ 0.8
COL13A1-210ENST00000517713 PKIAP61925 76 aa20.02■□□□□ 0.79
COL13A1-210ENST00000517713 FAM104BQ5XKR9 115 aa20.02■□□□□ 0.79
COL13A1-210ENST00000517713 ZFAND2AQ8N6M9 145 aa20.02■□□□□ 0.79
COL13A1-210ENST00000517713 MS4A6AQ9H2W1 248 aa20.01■□□□□ 0.79
COL13A1-210ENST00000517713 YAE1D1Q9NRH1 226 aa20.01■□□□□ 0.79
COL13A1-210ENST00000517713 RNF114Q9Y508 228 aa20.01■□□□□ 0.79
COL13A1-210ENST00000517713 M0QZ24 198 aa20■□□□□ 0.79
COL13A1-210ENST00000517713 Q6ZQT7 251 aa20■□□□□ 0.79
COL13A1-210ENST00000517713 CHCHD1Q96BP2 118 aaKnown RBP20■□□□□ 0.79
COL13A1-210ENST00000517713 FAM19A4Q96LR4 140 aa20■□□□□ 0.79
COL13A1-210ENST00000517713 KRTDAPP60985 99 aa20■□□□□ 0.79
COL13A1-210ENST00000517713 C18orf65Q6ZTR6 163 aa20■□□□□ 0.79
COL13A1-210ENST00000517713 AMN1Q8IY45 258 aa20■□□□□ 0.79
COL13A1-210ENST00000517713 M0R2Z0 102 aa19.99■□□□□ 0.79
COL13A1-210ENST00000517713 PRO1933Q9H354 126 aa19.99■□□□□ 0.79
COL13A1-210ENST00000517713 J3KRW8 73 aa19.98■□□□□ 0.79
COL13A1-210ENST00000517713 Q6ZSV7 163 aa19.98■□□□□ 0.79
COL13A1-210ENST00000517713 TSTD3H0UI37 97 aa19.98■□□□□ 0.79
COL13A1-210ENST00000517713 LINC00614P0C842 121 aa19.98■□□□□ 0.79
COL13A1-210ENST00000517713 ZNF664Q8N3J9 261 aa19.98■□□□□ 0.79
COL13A1-210ENST00000517713 C2orf70A6NJV1 201 aa19.97■□□□□ 0.79
COL13A1-210ENST00000517713 MSRB1Q9NZV6 116 aa19.97■□□□□ 0.79
COL13A1-210ENST00000517713 TRBV7-9A0A0J9YWB2 115 aa19.97■□□□□ 0.79
COL13A1-210ENST00000517713 TFPI2P48307 235 aa19.97■□□□□ 0.79
COL13A1-210ENST00000517713 DEFB136Q30KP8 78 aa19.97■□□□□ 0.79
COL13A1-210ENST00000517713 TMEM191AQ9H0A3 160 aa19.97■□□□□ 0.79
COL13A1-210ENST00000517713 U3KQK5 164 aa19.97■□□□□ 0.79
COL13A1-210ENST00000517713 TRAV21A0A0B4J279 112 aa19.96■□□□□ 0.79
COL13A1-210ENST00000517713 TCTEX1D4Q5JR98 221 aa19.96■□□□□ 0.79
COL13A1-210ENST00000517713 ESM1Q9NQ30 184 aa19.96■□□□□ 0.79
COL13A1-210ENST00000517713 D6R8Y8 96 aa19.95■□□□□ 0.78
COL13A1-210ENST00000517713 MRPL51Q4U2R6 128 aaKnown RBP19.95■□□□□ 0.78
COL13A1-210ENST00000517713 DMRTA1Q5VZB9 504 aa19.95■□□□□ 0.78
COL13A1-210ENST00000517713 HELZ2Q9BYK8 2649 aaKnown RBP19.95■□□□□ 0.78
COL13A1-210ENST00000517713 SLURP1P55000 103 aa19.95■□□□□ 0.78
COL13A1-210ENST00000517713 C4orf3Q8WVX3 66 aa19.95■□□□□ 0.78
COL13A1-210ENST00000517713 LINC01619G3V211 115 aa19.94■□□□□ 0.78
COL13A1-210ENST00000517713 CSN3P07498 182 aa19.94■□□□□ 0.78
COL13A1-210ENST00000517713 APRG1Q8IVJ8 170 aa19.94■□□□□ 0.78
COL13A1-210ENST00000517713 K7EQG2 157 aa19.93■□□□□ 0.78
COL13A1-210ENST00000517713 C3orf79P0CE67 100 aa19.93■□□□□ 0.78
COL13A1-210ENST00000517713 ORMDL3Q8N138 153 aa19.93■□□□□ 0.78
COL13A1-210ENST00000517713 RNASE4P34096 147 aaKnown RBP19.93■□□□□ 0.78
COL13A1-210ENST00000517713 SNRPD3P62318 126 aaKnown RBP19.93■□□□□ 0.78
COL13A1-210ENST00000517713 KHDC1LQ5JSQ8 128 aa19.93■□□□□ 0.78
COL13A1-210ENST00000517713 ZNF688P0C7X2 276 aa19.92■□□□□ 0.78
COL13A1-210ENST00000517713 PMCHL1Q16048 86 aa19.92■□□□□ 0.78
COL13A1-210ENST00000517713 PSMG4Q5JS54 123 aa19.92■□□□□ 0.78
COL13A1-210ENST00000517713 OR11H1Q8NG94 326 aa19.92■□□□□ 0.78
COL13A1-210ENST00000517713 PRELID3AQ96N28 172 aa19.92■□□□□ 0.78
COL13A1-210ENST00000517713 FLNAP21333 2647 aaKnown RBP19.92■□□□□ 0.78
COL13A1-210ENST00000517713 OR5AL1P0C617 328 aa19.92■□□□□ 0.78
COL13A1-210ENST00000517713 Q8N976 141 aa19.92■□□□□ 0.78
COL13A1-210ENST00000517713 DPF1Q92782 380 aa19.92■□□□□ 0.78
COL13A1-210ENST00000517713 IGHV1-24A0A0C4DH33 117 aa19.91■□□□□ 0.78
COL13A1-210ENST00000517713 TEX43Q6ZNM6 134 aa19.91■□□□□ 0.78
COL13A1-210ENST00000517713 SNAI2O43623 268 aa19.9■□□□□ 0.78
COL13A1-210ENST00000517713 ADAMTSL5Q6ZMM2 481 aa19.9■□□□□ 0.78
COL13A1-210ENST00000517713 OR1N2Q8NGR9 330 aa19.9■□□□□ 0.78
COL13A1-210ENST00000517713 OR10AG1Q8NH19 301 aa19.9■□□□□ 0.78
COL13A1-210ENST00000517713 CCDC168Q8NDH2 2452 aa19.9■□□□□ 0.78
COL13A1-210ENST00000517713 CKS2P33552 79 aa19.9■□□□□ 0.78
COL13A1-210ENST00000517713 KIR3DS1Q14943 382 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms