RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 ANK1P16157 1881 aa2.33□□□□□ -2.04
RNU4-60P-201ENST00000517239 DOCK1Q14185 1865 aa2.33□□□□□ -2.04
RNU4-60P-201ENST00000517239 CASZ1Q86V15 1759 aa2.32□□□□□ -2.04
RNU4-60P-201ENST00000517239 IGLV10-54A0A075B6I4 117 aa2.32□□□□□ -2.04
RNU4-60P-201ENST00000517239 IBA57-AS1B1ANH7 110 aa2.32□□□□□ -2.04
RNU4-60P-201ENST00000517239 DSCR4P56555 118 aaPredicted RBP2.32□□□□□ -2.04
RNU4-60P-201ENST00000517239 DEFB134Q4QY38 66 aa2.32□□□□□ -2.04
RNU4-60P-201ENST00000517239 LINC00269Q8N2A0 174 aa2.32□□□□□ -2.04
RNU4-60P-201ENST00000517239 AQP10Q96PS8 301 aa2.32□□□□□ -2.04
RNU4-60P-201ENST00000517239 DSCR8Q96T75 97 aa2.32□□□□□ -2.04
RNU4-60P-201ENST00000517239 NDUFB11Q9NX14 153 aa2.32□□□□□ -2.04
RNU4-60P-201ENST00000517239 SCP2D1Q9UJQ7 156 aa2.32□□□□□ -2.04
RNU4-60P-201ENST00000517239 KIAA1549Q9HCM3 1950 aa2.32□□□□□ -2.04
RNU4-60P-201ENST00000517239 MED14O60244 1454 aa2.32□□□□□ -2.04
RNU4-60P-201ENST00000517239 FYCO1Q9BQS8 1478 aa2.32□□□□□ -2.04
RNU4-60P-201ENST00000517239 SMARCA4P51532 1647 aa2.31□□□□□ -2.04
RNU4-60P-201ENST00000517239 EML5Q05BV3 1969 aa2.31□□□□□ -2.04
RNU4-60P-201ENST00000517239 IGLV4-60A0A075B6I1 120 aa2.31□□□□□ -2.04
RNU4-60P-201ENST00000517239 IGKV3D-11A0A0A0MRZ8 115 aa2.31□□□□□ -2.04
RNU4-60P-201ENST00000517239 A0A1W2PNM2 257 aa2.31□□□□□ -2.04
RNU4-60P-201ENST00000517239 FAM24AA6NFZ4 105 aa2.31□□□□□ -2.04
RNU4-60P-201ENST00000517239 E7EUB6 86 aa2.31□□□□□ -2.04
RNU4-60P-201ENST00000517239 ERC2-IT1O76042 136 aa2.31□□□□□ -2.04
RNU4-60P-201ENST00000517239 GYPBP06028 91 aa2.31□□□□□ -2.04
RNU4-60P-201ENST00000517239 PRB4P10163 310 aaPredicted RBP2.31□□□□□ -2.04
RNU4-60P-201ENST00000517239 PIPP12273 146 aaPredicted RBP2.31□□□□□ -2.04
RNU4-60P-201ENST00000517239 HOXB6P17509 224 aaKnown RBP2.31□□□□□ -2.04
RNU4-60P-201ENST00000517239 VAMP8Q9BV40 100 aa2.31□□□□□ -2.04
RNU4-60P-201ENST00000517239 TP53TG3Q9ULZ0 132 aa2.31□□□□□ -2.04
RNU4-60P-201ENST00000517239 AP4S1Q9Y587 144 aa2.31□□□□□ -2.04
RNU4-60P-201ENST00000517239 SLIT3O75094 1523 aa2.31□□□□□ -2.04
RNU4-60P-201ENST00000517239 LRP5O75197 1615 aa2.31□□□□□ -2.04
RNU4-60P-201ENST00000517239 TRAV10A0A0B4J240 114 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 MUC21A0A0G2JKD1 596 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 MUC21A0A140T8X8 626 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 TCRBV3S1A0A5B6 114 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 TCRBV4S1A1TA0A5B7 111 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 E7EQL1 145 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 TMEM262E9PQX1 116 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 NDUFB6O95139 128 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 GAS8-AS1O95177 125 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 CTSGP08311 255 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 PIRTP0C851 137 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 ADCYAP1P18509 176 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 MT3P25713 68 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 RPL26P61254 145 aaKnown RBP2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 LY6EQ16553 131 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 S100A7L2Q5SY68 101 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 LCE1AQ5T7P2 110 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 ZCCHC23Q6ZST2 131 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 SLC25A26Q70HW3 274 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 FP248Q71RG6 208 aaPredicted RBP2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 CLECL1Q8IZS7 167 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 CMTM2Q8TAZ6 248 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 DYNLRB2Q8TF09 96 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 PRO1933Q9H354 126 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 PRR34Q9NV39 138 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 ARHGAP35Q9NRY4 1499 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 SLIT2O94813 1529 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 TOPAZ1Q8N9V7 1692 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 PLXNA4Q9HCM2 1894 aa2.3□□□□□ -2.04
RNU4-60P-201ENST00000517239 ADAMTS9Q9P2N4 1935 aa2.29□□□□□ -2.04
RNU4-60P-201ENST00000517239 PLXNA2O75051 1894 aa2.29□□□□□ -2.04
RNU4-60P-201ENST00000517239 LAMB2P55268 1798 aa2.29□□□□□ -2.04
RNU4-60P-201ENST00000517239 TRAV17A0A0B4J275 112 aa2.29□□□□□ -2.04
RNU4-60P-201ENST00000517239 C12orf73Q69YU5 71 aa2.29□□□□□ -2.04
RNU4-60P-201ENST00000517239 Q8TAT8 98 aa2.29□□□□□ -2.04
RNU4-60P-201ENST00000517239 Q9BRP9 147 aa2.29□□□□□ -2.04
RNU4-60P-201ENST00000517239 DPY30Q9C005 99 aa2.29□□□□□ -2.04
RNU4-60P-201ENST00000517239 LHFPL6Q9Y693 200 aa2.29□□□□□ -2.04
RNU4-60P-201ENST00000517239 ZSWIM8A7E2V4 1837 aa2.28□□□□□ -2.04
RNU4-60P-201ENST00000517239 PARP14Q460N5 1801 aa2.28□□□□□ -2.04
RNU4-60P-201ENST00000517239 TEX14Q8IWB6 1497 aa2.28□□□□□ -2.04
RNU4-60P-201ENST00000517239 TRAV14DV4A0A0A6YYC5 116 aa2.28□□□□□ -2.04
RNU4-60P-201ENST00000517239 TRAV12-1A0A0B4J245 112 aa2.28□□□□□ -2.04
RNU4-60P-201ENST00000517239 CXCL8P10145 99 aa2.28□□□□□ -2.04
RNU4-60P-201ENST00000517239 INSL4Q14641 139 aa2.28□□□□□ -2.04
RNU4-60P-201ENST00000517239 SPANXN1Q5VSR9 72 aa2.28□□□□□ -2.04
RNU4-60P-201ENST00000517239 C2orf82Q6UX34 121 aa2.28□□□□□ -2.04
RNU4-60P-201ENST00000517239 TSKUQ8WUA8 353 aa2.28□□□□□ -2.04
RNU4-60P-201ENST00000517239 KRTAP4-12Q9BQ66 201 aa2.28□□□□□ -2.04
RNU4-60P-201ENST00000517239 PSORS1C2Q9UIG4 136 aa2.28□□□□□ -2.04
RNU4-60P-201ENST00000517239 ARAP2Q8WZ64 1704 aa2.28□□□□□ -2.05
RNU4-60P-201ENST00000517239 CACNA1DQ01668 2161 aa2.27□□□□□ -2.05
RNU4-60P-201ENST00000517239 ADGRB3O60242 1522 aa2.27□□□□□ -2.05
RNU4-60P-201ENST00000517239 MAGI1Q96QZ7 1491 aaPredicted RBP2.27□□□□□ -2.05
RNU4-60P-201ENST00000517239 A0A087WSZ3 146 aa2.27□□□□□ -2.05
RNU4-60P-201ENST00000517239 UQCRHLA0A096LP55 91 aa2.27□□□□□ -2.05
RNU4-60P-201ENST00000517239 UQCRHP07919 91 aa2.27□□□□□ -2.05
RNU4-60P-201ENST00000517239 SNCAP37840 140 aa2.27□□□□□ -2.05
RNU4-60P-201ENST00000517239 MIR22HGQ0VDD5 57 aa2.27□□□□□ -2.05
RNU4-60P-201ENST00000517239 MOBPQ13875 183 aa2.27□□□□□ -2.05
RNU4-60P-201ENST00000517239 KRTAP11-1Q8IUC1 163 aa2.27□□□□□ -2.05
RNU4-60P-201ENST00000517239 Q8N8P6 123 aa2.27□□□□□ -2.05
RNU4-60P-201ENST00000517239 TMEM106BQ9NUM4 274 aa2.27□□□□□ -2.05
RNU4-60P-201ENST00000517239 PRO2289Q9P1D8 64 aa2.27□□□□□ -2.05
RNU4-60P-201ENST00000517239 NDUFA12Q9UI09 145 aa2.27□□□□□ -2.05
RNU4-60P-201ENST00000517239 MUC22E2RYF6 1773 aaPredicted RBP2.27□□□□□ -2.05
RNU4-60P-201ENST00000517239 CHD1O14646 1710 aa2.27□□□□□ -2.05
RNU4-60P-201ENST00000517239 MYH8P13535 1937 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms