RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 ZNF256Q9Y2P7 627 aaPredicted RBP5.88□□□□□ -1.47
PDLIM5-219ENST00000514743 ZGRF1Q86YA3 2104 aa5.88□□□□□ -1.47
PDLIM5-219ENST00000514743 LOC107984156A0A0G2JMH3 177 aa5.88□□□□□ -1.47
PDLIM5-219ENST00000514743 SCGB1C2P0DMR2 95 aa5.88□□□□□ -1.47
PDLIM5-219ENST00000514743 APRG1Q8IVJ8 170 aa5.88□□□□□ -1.47
PDLIM5-219ENST00000514743 ARL17AQ8IVW1 177 aa5.88□□□□□ -1.47
PDLIM5-219ENST00000514743 ZCCHC24Q8N2G6 241 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-219ENST00000514743 BRK1Q8WUW1 75 aa5.88□□□□□ -1.47
PDLIM5-219ENST00000514743 SSMEM1Q8WWF3 244 aa5.88□□□□□ -1.47
PDLIM5-219ENST00000514743 URB1-AS1Q96HZ7 61 aa5.88□□□□□ -1.47
PDLIM5-219ENST00000514743 BEX4Q9NWD9 120 aaPredicted RBP5.88□□□□□ -1.47
PDLIM5-219ENST00000514743 TRGV8A0A0C4DH27 118 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 SCO2A0A1W2PP80 73 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 hADV29S1A0JD25 119 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 C15orf61A6NNL5 157 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 NPIPB6E9PJ23 425 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 H7C1H1 209 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 TREML4Q6UXN2 200 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 HHLA3Q9XRX5 114 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 ZFHX2Q9C0A1 2572 aaPredicted RBP5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 ARFGEF3Q5TH69 2177 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 K7ENP7 123 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 IL4P05112 153 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 LINC01620Q4KN68 170 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 GTSCR1Q86UQ5 136 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 C10orf105Q8TEF2 133 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 S1PR3Q99500 378 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 CCL13Q99616 98 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 MGST2Q99735 147 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 ZNRD1Q9P1U0 126 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 SPTBN2O15020 2390 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 TRGV11A0A075B6L2 103 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 TMEM155Q4W5P6 130 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 MIC13Q5XKP0 118 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 MOB3BQ86TA1 216 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 AMN1Q8IY45 258 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 LINC01561Q8N1V8 128 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 ODF3Q96PU9 254 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 HEYLQ9NQ87 328 aaPredicted RBP5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 TMEM14BQ9NUH8 114 aa5.87□□□□□ -1.47
PDLIM5-219ENST00000514743 LRBAP50851 2863 aa5.86□□□□□ -1.47
PDLIM5-219ENST00000514743 NCR2O95944 276 aa5.86□□□□□ -1.47
PDLIM5-219ENST00000514743 FCER1GP30273 86 aa5.86□□□□□ -1.47
PDLIM5-219ENST00000514743 MFAP2P55001 183 aa5.86□□□□□ -1.47
PDLIM5-219ENST00000514743 SFTA2Q6UW10 78 aa5.86□□□□□ -1.47
PDLIM5-219ENST00000514743 ZZEF1O43149 2961 aa5.86□□□□□ -1.47
PDLIM5-219ENST00000514743 IZUMO1RA6ND01 250 aa5.86□□□□□ -1.47
PDLIM5-219ENST00000514743 DEFB108BQ8NET1 73 aa5.86□□□□□ -1.47
PDLIM5-219ENST00000514743 PLEKHA3Q9HB20 300 aa5.86□□□□□ -1.47
PDLIM5-219ENST00000514743 HIGD1BQ9P298 99 aa5.86□□□□□ -1.47
PDLIM5-219ENST00000514743 CRYGAP11844 174 aa5.86□□□□□ -1.47
PDLIM5-219ENST00000514743 GCHFRP30047 84 aa5.86□□□□□ -1.47
PDLIM5-219ENST00000514743 SLC25A48Q6ZT89 311 aaKnown RBP5.86□□□□□ -1.47
PDLIM5-219ENST00000514743 LINC00482Q8N8I6 264 aa5.86□□□□□ -1.47
PDLIM5-219ENST00000514743 LINC00527Q9UJ94 153 aa5.86□□□□□ -1.47
PDLIM5-219ENST00000514743 IGKV1-16P04430 117 aa5.85□□□□□ -1.47
PDLIM5-219ENST00000514743 ARL14EPLP0DKL9 152 aa5.85□□□□□ -1.47
PDLIM5-219ENST00000514743 COX7CP15954 63 aa5.85□□□□□ -1.47
PDLIM5-219ENST00000514743 ERVK-16P61578 105 aa5.85□□□□□ -1.47
PDLIM5-219ENST00000514743 CCL8P80075 99 aa5.85□□□□□ -1.47
PDLIM5-219ENST00000514743 ZNF56Q15929 161 aa5.85□□□□□ -1.47
PDLIM5-219ENST00000514743 MORN3Q6PF18 240 aaPredicted RBP5.85□□□□□ -1.47
PDLIM5-219ENST00000514743 OR8A1Q8NGG7 326 aa5.85□□□□□ -1.47
PDLIM5-219ENST00000514743 PLEKHB2Q96CS7 222 aa5.85□□□□□ -1.47
PDLIM5-219ENST00000514743 RPUSD1Q9UJJ7 312 aaKnown RBP5.85□□□□□ -1.47
PDLIM5-219ENST00000514743 SRRM4A7MD48 611 aaKnown RBP5.85□□□□□ -1.47
PDLIM5-219ENST00000514743 BSPH1Q075Z2 132 aa5.85□□□□□ -1.47
PDLIM5-219ENST00000514743 PIEZO2Q9H5I5 2752 aa5.85□□□□□ -1.47
PDLIM5-219ENST00000514743 TNCP24821 2201 aa5.85□□□□□ -1.47
PDLIM5-219ENST00000514743 C17orf100A8MU93 164 aa5.84□□□□□ -1.47
PDLIM5-219ENST00000514743 LY6LH3BQJ8 138 aa5.84□□□□□ -1.47
PDLIM5-219ENST00000514743 ELANEP08246 267 aa5.84□□□□□ -1.47
PDLIM5-219ENST00000514743 HLA-DRB4P13762 266 aa5.84□□□□□ -1.47
PDLIM5-219ENST00000514743 ASPHD1Q5U4P2 390 aa5.84□□□□□ -1.47
PDLIM5-219ENST00000514743 NPIPB3Q92617 1050 aa5.84□□□□□ -1.47
PDLIM5-219ENST00000514743 HLA-DRB4X5D2U9 266 aa5.84□□□□□ -1.47
PDLIM5-219ENST00000514743 TACC2O95359 2948 aa5.84□□□□□ -1.47
PDLIM5-219ENST00000514743 LTAP01374 205 aa5.84□□□□□ -1.47
PDLIM5-219ENST00000514743 LGALS1P09382 135 aaKnown RBP5.84□□□□□ -1.47
PDLIM5-219ENST00000514743 HERVK_113P61574 105 aa5.84□□□□□ -1.47
PDLIM5-219ENST00000514743 ZNF833PQ6ZTB9 187 aa5.84□□□□□ -1.47
PDLIM5-219ENST00000514743 MUC6Q6W4X9 2439 aa5.84□□□□□ -1.47
PDLIM5-219ENST00000514743 NDUFS7O75251 213 aa5.84□□□□□ -1.48
PDLIM5-219ENST00000514743 NDUFC2O95298 119 aa5.84□□□□□ -1.48
PDLIM5-219ENST00000514743 IGKCP01834 107 aa5.84□□□□□ -1.48
PDLIM5-219ENST00000514743 CEMP1Q6PRD7 247 aaPredicted RBP5.84□□□□□ -1.48
PDLIM5-219ENST00000514743 RIF1Q5UIP0 2472 aaKnown RBP5.84□□□□□ -1.48
PDLIM5-219ENST00000514743 HRNRQ86YZ3 2850 aaPredicted RBP5.84□□□□□ -1.48
PDLIM5-219ENST00000514743 PCNX1Q96RV3 2341 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 P01737 135 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 CD164Q04900 197 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 PMAIP1Q13794 54 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 KHDC1LQ5JSQ8 128 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 LINC00311Q8N616 119 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 PKDREJQ9NTG1 2253 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 TRBV7-7A0A0K0K1E9 115 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 CCL3L1P16619 93 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 CACNG7P62955 275 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 TMEM30BQ3MIR4 351 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 MRPL53Q96EL3 112 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms