RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 RBMY1BA6NDE4 496 aaKnown RBP6.92□□□□□ -1.3
DHFR-206ENST00000513048 RBMY1EA6NEQ0 496 aaKnown RBP6.92□□□□□ -1.3
DHFR-206ENST00000513048 KNCNA6PVL3 124 aa6.92□□□□□ -1.3
DHFR-206ENST00000513048 RBMY1DP0C7P1 496 aaKnown RBP6.92□□□□□ -1.3
DHFR-206ENST00000513048 HLA-DRB4P13762 266 aa6.92□□□□□ -1.3
DHFR-206ENST00000513048 CD33P20138 364 aa6.92□□□□□ -1.3
DHFR-206ENST00000513048 BTN1A1Q13410 526 aa6.92□□□□□ -1.3
DHFR-206ENST00000513048 TMEM88Q6PEY1 159 aa6.92□□□□□ -1.3
DHFR-206ENST00000513048 ZNF575Q86XF7 245 aa6.92□□□□□ -1.3
DHFR-206ENST00000513048 ODF3Q96PU9 254 aa6.92□□□□□ -1.3
DHFR-206ENST00000513048 MDFIQ99750 246 aa6.92□□□□□ -1.3
DHFR-206ENST00000513048 FAM110AQ9BQ89 295 aa6.92□□□□□ -1.3
DHFR-206ENST00000513048 TUBA4BQ9H853 241 aa6.92□□□□□ -1.3
DHFR-206ENST00000513048 HLA-DRB4X5D2U9 266 aa6.92□□□□□ -1.3
DHFR-206ENST00000513048 CXorf65A6NEN9 183 aa6.91□□□□□ -1.3
DHFR-206ENST00000513048 KLLNB2CW77 178 aa6.91□□□□□ -1.3
DHFR-206ENST00000513048 H3BMM0 161 aa6.91□□□□□ -1.3
DHFR-206ENST00000513048 H7BYZ3 331 aa6.91□□□□□ -1.3
DHFR-206ENST00000513048 PPP1R2P9O14990 202 aa6.91□□□□□ -1.3
DHFR-206ENST00000513048 DUSP14O95147 198 aaKnown RBP6.91□□□□□ -1.3
DHFR-206ENST00000513048 PFN1P07737 140 aaKnown RBP6.91□□□□□ -1.3
DHFR-206ENST00000513048 CD7P09564 240 aa6.91□□□□□ -1.3
DHFR-206ENST00000513048 ERVFC1-1P60608 527 aa6.91□□□□□ -1.3
DHFR-206ENST00000513048 KIR3DS1Q14943 382 aa6.91□□□□□ -1.3
DHFR-206ENST00000513048 SMUG1Q53HV7 270 aa6.91□□□□□ -1.3
DHFR-206ENST00000513048 IBA57Q5T440 356 aaKnown RBP6.91□□□□□ -1.3
DHFR-206ENST00000513048 PRR27Q6MZM9 219 aa6.91□□□□□ -1.3
DHFR-206ENST00000513048 EBLN2Q6P2I7 272 aa6.91□□□□□ -1.3
DHFR-206ENST00000513048 CLUHP3Q96NS8 147 aa6.91□□□□□ -1.3
DHFR-206ENST00000513048 NDFIP1Q9BT67 221 aa6.91□□□□□ -1.3
DHFR-206ENST00000513048 MCRIP2Q9BUT9 160 aaKnown RBP6.91□□□□□ -1.3
DHFR-206ENST00000513048 BIN3Q9NQY0 253 aa6.91□□□□□ -1.3
DHFR-206ENST00000513048 SMCO4Q9NRQ5 59 aa6.91□□□□□ -1.3
DHFR-206ENST00000513048 NOTCH3Q9UM47 2321 aa6.9□□□□□ -1.3
DHFR-206ENST00000513048 SH2D1AO60880 128 aa6.9□□□□□ -1.3
DHFR-206ENST00000513048 IGLL1P15814 213 aa6.9□□□□□ -1.3
DHFR-206ENST00000513048 CMC4P56277 68 aaPredicted RBP6.9□□□□□ -1.3
DHFR-206ENST00000513048 ACTL10Q5JWF8 245 aa6.9□□□□□ -1.3
DHFR-206ENST00000513048 Q6ZQT7 251 aa6.9□□□□□ -1.3
DHFR-206ENST00000513048 C15orf54Q8N8G6 183 aa6.9□□□□□ -1.3
DHFR-206ENST00000513048 C11orf21Q9P2W6 132 aa6.9□□□□□ -1.3
DHFR-206ENST00000513048 SMIM27A0A1W2PRY6 76 aa6.89□□□□□ -1.31
DHFR-206ENST00000513048 COLCA2A8K830 154 aa6.89□□□□□ -1.31
DHFR-206ENST00000513048 OR11H12B2RN74 326 aa6.89□□□□□ -1.31
DHFR-206ENST00000513048 GATCO43716 136 aaKnown RBP6.89□□□□□ -1.31
DHFR-206ENST00000513048 CA1P00915 261 aaPredicted RBP6.89□□□□□ -1.31
DHFR-206ENST00000513048 ELOBQ15370 118 aa6.89□□□□□ -1.31
DHFR-206ENST00000513048 CT83Q5H943 113 aa6.89□□□□□ -1.31
DHFR-206ENST00000513048 FAM162BQ5T6X4 162 aa6.89□□□□□ -1.31
DHFR-206ENST00000513048 Q6AWC8 147 aa6.89□□□□□ -1.31
DHFR-206ENST00000513048 OR4B1Q8NGF8 309 aa6.89□□□□□ -1.31
DHFR-206ENST00000513048 IMMP2LQ96T52 175 aa6.89□□□□□ -1.31
DHFR-206ENST00000513048 PYGO2Q9BRQ0 406 aa6.89□□□□□ -1.31
DHFR-206ENST00000513048 WFDC10AQ9H1F0 79 aa6.89□□□□□ -1.31
DHFR-206ENST00000513048 RPP21Q9H633 154 aaKnown RBP6.89□□□□□ -1.31
DHFR-206ENST00000513048 IL36BQ9NZH7 164 aa6.89□□□□□ -1.31
DHFR-206ENST00000513048 FABP5P3A8MUU1 101 aa6.88□□□□□ -1.31
DHFR-206ENST00000513048 ZNF705GA8MUZ8 300 aaPredicted RBP6.88□□□□□ -1.31
DHFR-206ENST00000513048 CRXO43186 299 aaPredicted RBP6.88□□□□□ -1.31
DHFR-206ENST00000513048 IGKV3-20P01619 116 aa6.88□□□□□ -1.31
DHFR-206ENST00000513048 P01737 135 aa6.88□□□□□ -1.31
DHFR-206ENST00000513048 LEPP41159 167 aa6.88□□□□□ -1.31
DHFR-206ENST00000513048 RPL19P84098 196 aaKnown RBP6.88□□□□□ -1.31
DHFR-206ENST00000513048 TRPT1Q86TN4 253 aaKnown RBP6.88□□□□□ -1.31
DHFR-206ENST00000513048 TGIF2-C20orf24A0A0A6YYL0 155 aa6.87□□□□□ -1.31
DHFR-206ENST00000513048 IGKV3D-20A0A0C4DH25 116 aa6.87□□□□□ -1.31
DHFR-206ENST00000513048 M0R2Z0 102 aa6.87□□□□□ -1.31
DHFR-206ENST00000513048 ZNF324O75467 553 aaPredicted RBP6.87□□□□□ -1.31
DHFR-206ENST00000513048 GPX1P07203 203 aa6.87□□□□□ -1.31
DHFR-206ENST00000513048 CXCL1P09341 107 aa6.87□□□□□ -1.31
DHFR-206ENST00000513048 RNASE4P34096 147 aaKnown RBP6.87□□□□□ -1.31
DHFR-206ENST00000513048 FAM3BP58499 235 aaPredicted RBP6.87□□□□□ -1.31
DHFR-206ENST00000513048 SPINK13Q1W4C9 94 aa6.87□□□□□ -1.31
DHFR-206ENST00000513048 PRR31Q5SQ13 230 aa6.87□□□□□ -1.31
DHFR-206ENST00000513048 GFI1BQ5VTD9 330 aa6.87□□□□□ -1.31
DHFR-206ENST00000513048 Q8N1Y9 231 aa6.87□□□□□ -1.31
DHFR-206ENST00000513048 OR2D3Q8NGH3 330 aa6.87□□□□□ -1.31
DHFR-206ENST00000513048 TSKUQ8WUA8 353 aa6.87□□□□□ -1.31
DHFR-206ENST00000513048 GTSF1Q8WW33 167 aa6.87□□□□□ -1.31
DHFR-206ENST00000513048 DAZAP1Q96EP5 407 aaKnown RBP6.87□□□□□ -1.31
DHFR-206ENST00000513048 URGCP-MRPS24S4R325 110 aa6.87□□□□□ -1.31
DHFR-206ENST00000513048 TRBV24-1A0A075B6N3 115 aa6.86□□□□□ -1.31
DHFR-206ENST00000513048 TRAV21A0A0B4J279 112 aa6.86□□□□□ -1.31
DHFR-206ENST00000513048 C7orf71A4D174 169 aa6.86□□□□□ -1.31
DHFR-206ENST00000513048 TMEM189A5PLL7 270 aa6.86□□□□□ -1.31
DHFR-206ENST00000513048 J3KRW8 73 aa6.86□□□□□ -1.31
DHFR-206ENST00000513048 RBMY1A1P0DJD3 496 aaKnown RBP6.86□□□□□ -1.31
DHFR-206ENST00000513048 RBMY1CP0DJD4 496 aa6.86□□□□□ -1.31
DHFR-206ENST00000513048 GZMBP10144 247 aa6.86□□□□□ -1.31
DHFR-206ENST00000513048 TSPOP30536 169 aa6.86□□□□□ -1.31
DHFR-206ENST00000513048 CDKN1BP46527 198 aa6.86□□□□□ -1.31
DHFR-206ENST00000513048 FOXA3P55318 350 aaPredicted RBP6.86□□□□□ -1.31
DHFR-206ENST00000513048 EGFEM1PQ0D2K5 195 aa6.86□□□□□ -1.31
DHFR-206ENST00000513048 RBMY1FQ15415 496 aaKnown RBP6.86□□□□□ -1.31
DHFR-206ENST00000513048 NEU1Q99519 415 aa6.86□□□□□ -1.31
DHFR-206ENST00000513048 GFRA4Q9GZZ7 299 aa6.86□□□□□ -1.31
DHFR-206ENST00000513048 TRAV12-2A0A075B6T6 113 aa6.85□□□□□ -1.31
DHFR-206ENST00000513048 TRAV9-1A0A075B6T8 112 aa6.85□□□□□ -1.31
DHFR-206ENST00000513048 FAM231BA6NCW3 169 aa6.85□□□□□ -1.31
DHFR-206ENST00000513048 A8MWL6 223 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms