RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ANAPC10Q9UM13 185 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 PUS1Q9Y606 427 aaKnown RBP eCLIP2.59□□□□□ -1.99
HTT-210ENST00000512909 NACAE9PAV3 2078 aa2.59□□□□□ -2
HTT-210ENST00000512909 ANK3Q12955 4377 aaKnown RBP2.58□□□□□ -2
HTT-210ENST00000512909 SVEP1Q4LDE5 3571 aa2.58□□□□□ -2
HTT-210ENST00000512909 DSCAML1Q8TD84 2053 aa2.58□□□□□ -2
HTT-210ENST00000512909 TRAV25A0A0B4J276 109 aa2.58□□□□□ -2
HTT-210ENST00000512909 IGHV7-4-1A0A0J9YVY3 117 aa2.58□□□□□ -2
HTT-210ENST00000512909 TMEM213A2RRL7 107 aa2.58□□□□□ -2
HTT-210ENST00000512909 CRYM-AS1A6NIL9 109 aa2.58□□□□□ -2
HTT-210ENST00000512909 FAM25EA8MYX2 175 aa2.58□□□□□ -2
HTT-210ENST00000512909 I3L2K1 104 aa2.58□□□□□ -2
HTT-210ENST00000512909 K7EIM0 57 aa2.58□□□□□ -2
HTT-210ENST00000512909 K7EMT4 169 aa2.58□□□□□ -2
HTT-210ENST00000512909 CORTO00230 105 aa2.58□□□□□ -2
HTT-210ENST00000512909 PLXNB1O43157 2135 aa2.58□□□□□ -2
HTT-210ENST00000512909 CDS2O95674 445 aa2.58□□□□□ -2
HTT-210ENST00000512909 RD3LP0DJH9 198 aa2.58□□□□□ -2
HTT-210ENST00000512909 RNASE2P10153 161 aaKnown RBP2.58□□□□□ -2
HTT-210ENST00000512909 OR10J1P30954 320 aa2.58□□□□□ -2
HTT-210ENST00000512909 EIF2B2P49770 351 aaKnown RBP2.58□□□□□ -2
HTT-210ENST00000512909 BCAP31P51572 246 aa2.58□□□□□ -2
HTT-210ENST00000512909 ZNF138P52744 262 aa2.58□□□□□ -2
HTT-210ENST00000512909 DEFB131AP59861 70 aa2.58□□□□□ -2
HTT-210ENST00000512909 RAB11AP62491 216 aa2.58□□□□□ -2
HTT-210ENST00000512909 DHRS2Q13268 280 aa2.58□□□□□ -2
HTT-210ENST00000512909 OR2F1Q13607 317 aa2.58□□□□□ -2
HTT-210ENST00000512909 SMCO1Q147U7 214 aa2.58□□□□□ -2
HTT-210ENST00000512909 SURF2Q15527 256 aaPredicted RBP2.58□□□□□ -2
HTT-210ENST00000512909 SPANXN5Q5MJ07 72 aa2.58□□□□□ -2
HTT-210ENST00000512909 LHFPL1Q86WI0 220 aa2.58□□□□□ -2
HTT-210ENST00000512909 OR11H7Q8NGC8 314 aa2.58□□□□□ -2
HTT-210ENST00000512909 LRRC20Q8TCA0 184 aa2.58□□□□□ -2
HTT-210ENST00000512909 DTD1Q8TEA8 209 aa2.58□□□□□ -2
HTT-210ENST00000512909 LINC00052Q96N35 136 aa2.58□□□□□ -2
HTT-210ENST00000512909 METTL26Q96S19 204 aa2.58□□□□□ -2
HTT-210ENST00000512909 GGTLC1Q9BX51 225 aa2.58□□□□□ -2
HTT-210ENST00000512909 ZNF436Q9C0F3 470 aaPredicted RBP2.58□□□□□ -2
HTT-210ENST00000512909 SLIRPQ9GZT3 109 aaKnown RBP2.58□□□□□ -2
HTT-210ENST00000512909 NXF2Q9GZY0 626 aaKnown RBP2.58□□□□□ -2
HTT-210ENST00000512909 DAZ1Q9NQZ3 744 aaKnown RBP2.58□□□□□ -2
HTT-210ENST00000512909 FLVCR2Q9UPI3 526 aa2.58□□□□□ -2
HTT-210ENST00000512909 TRAV6A0A075B6T7 132 aa2.57□□□□□ -2
HTT-210ENST00000512909 PIGBOS1A0A0B4J2F0 54 aa2.57□□□□□ -2
HTT-210ENST00000512909 A0A1B0GVX0 72 aa2.57□□□□□ -2
HTT-210ENST00000512909 NAP1L6A6NFF2 107 aa2.57□□□□□ -2
HTT-210ENST00000512909 KNCNA6PVL3 124 aa2.57□□□□□ -2
HTT-210ENST00000512909 SNRPGP15A8MWD9 76 aa2.57□□□□□ -2
HTT-210ENST00000512909 DEFB4AO15263 64 aa2.57□□□□□ -2
HTT-210ENST00000512909 SFT2D2O95562 160 aa2.57□□□□□ -2
HTT-210ENST00000512909 HBE1P02100 147 aa2.57□□□□□ -2
HTT-210ENST00000512909 FABP1P07148 127 aa2.57□□□□□ -2
HTT-210ENST00000512909 C8orf88P0DMB2 117 aa2.57□□□□□ -2
HTT-210ENST00000512909 SLC25A4P12235 298 aa2.57□□□□□ -2
HTT-210ENST00000512909 ORM2P19652 201 aa2.57□□□□□ -2
HTT-210ENST00000512909 TNFRSF9Q07011 255 aa2.57□□□□□ -2
HTT-210ENST00000512909 PPP1R1AQ13522 171 aa2.57□□□□□ -2
HTT-210ENST00000512909 ZNF846Q147U1 533 aa2.57□□□□□ -2
HTT-210ENST00000512909 DEFB135Q30KP9 77 aa2.57□□□□□ -2
HTT-210ENST00000512909 TMEM128Q5BJH2 165 aa2.57□□□□□ -2
HTT-210ENST00000512909 LHFPL5Q8TAF8 219 aa2.57□□□□□ -2
HTT-210ENST00000512909 OR10C1Q96KK4 312 aa2.57□□□□□ -2
HTT-210ENST00000512909 SLC25A21Q9BQT8 299 aaPredicted RBP2.57□□□□□ -2
HTT-210ENST00000512909 CHAC1Q9BUX1 264 aa2.57□□□□□ -2
HTT-210ENST00000512909 MS4A6AQ9H2W1 248 aa2.57□□□□□ -2
HTT-210ENST00000512909 SAV1Q9H4B6 383 aaPredicted RBP2.57□□□□□ -2
HTT-210ENST00000512909 PSENENQ9NZ42 101 aa2.57□□□□□ -2
HTT-210ENST00000512909 CACFD1Q9UGQ2 172 aa2.57□□□□□ -2
HTT-210ENST00000512909 TMEM56-RWDD3S4R434 201 aa2.57□□□□□ -2
HTT-210ENST00000512909 U3KQ87 197 aa2.57□□□□□ -2
HTT-210ENST00000512909 C9orf170A2RU37 121 aa2.56□□□□□ -2
HTT-210ENST00000512909 A8MWP6 167 aa2.56□□□□□ -2
HTT-210ENST00000512909 H3BP45 60 aa2.56□□□□□ -2
HTT-210ENST00000512909 RTL8CO15255 209 aa2.56□□□□□ -2
HTT-210ENST00000512909 SYNGR2O43760 224 aa2.56□□□□□ -2
HTT-210ENST00000512909 HSBP1O75506 76 aa2.56□□□□□ -2
HTT-210ENST00000512909 ADAP1O75689 374 aa2.56□□□□□ -2
HTT-210ENST00000512909 LY6G6CO95867 125 aa2.56□□□□□ -2
HTT-210ENST00000512909 APCSP02743 223 aa2.56□□□□□ -2
HTT-210ENST00000512909 CD5P06127 495 aa2.56□□□□□ -2
HTT-210ENST00000512909 OR5G3P0C626 314 aa2.56□□□□□ -2
HTT-210ENST00000512909 AP2S1P53680 142 aaPredicted RBP2.56□□□□□ -2
HTT-210ENST00000512909 FXYD7P58549 80 aa2.56□□□□□ -2
HTT-210ENST00000512909 RRAS2P62070 204 aaPredicted RBP2.56□□□□□ -2
HTT-210ENST00000512909 AKR1C1Q04828 323 aa2.56□□□□□ -2
HTT-210ENST00000512909 SYCNQ0VAF6 134 aa2.56□□□□□ -2
HTT-210ENST00000512909 IAH1Q2TAA2 248 aaPredicted RBP2.56□□□□□ -2
HTT-210ENST00000512909 PSMG4Q5JS54 123 aa2.56□□□□□ -2
HTT-210ENST00000512909 ACTL10Q5JWF8 245 aa2.56□□□□□ -2
HTT-210ENST00000512909 PRSS54Q6PEW0 395 aa2.56□□□□□ -2
HTT-210ENST00000512909 CEMP1Q6PRD7 247 aaPredicted RBP2.56□□□□□ -2
HTT-210ENST00000512909 OR8I2Q8N0Y5 310 aa2.56□□□□□ -2
HTT-210ENST00000512909 OR4B1Q8NGF8 309 aa2.56□□□□□ -2
HTT-210ENST00000512909 OR11H2Q8NH07 326 aa2.56□□□□□ -2
HTT-210ENST00000512909 OR4X1Q8NH49 305 aa2.56□□□□□ -2
HTT-210ENST00000512909 OR52E5Q8NH55 327 aa2.56□□□□□ -2
HTT-210ENST00000512909 RNASEH2CQ8TDP1 164 aaKnown RBP2.56□□□□□ -2
HTT-210ENST00000512909 TM2D3Q9BRN9 247 aa2.56□□□□□ -2
HTT-210ENST00000512909 MRPL36Q9P0J6 103 aaKnown RBP2.56□□□□□ -2
HTT-210ENST00000512909 LSM5Q9Y4Y9 91 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms