RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 C5orf51A6NDU8 294 aa5.57□□□□□ -1.52
CLCN3-208ENST00000512813 GAGE12JA6NER3 117 aa5.57□□□□□ -1.52
CLCN3-208ENST00000512813 TNFAIP8O95379 198 aa5.57□□□□□ -1.52
CLCN3-208ENST00000512813 LINC00869P0C866 280 aa5.57□□□□□ -1.52
CLCN3-208ENST00000512813 IGLC2P0DOY2 106 aa5.57□□□□□ -1.52
CLCN3-208ENST00000512813 INPP1P49441 399 aa5.57□□□□□ -1.52
CLCN3-208ENST00000512813 GAGE1Q13065 139 aa5.57□□□□□ -1.52
CLCN3-208ENST00000512813 GAGE4Q13068 117 aa5.57□□□□□ -1.52
CLCN3-208ENST00000512813 GAGE5Q13069 117 aa5.57□□□□□ -1.52
CLCN3-208ENST00000512813 GAGE13Q4V321 117 aa5.57□□□□□ -1.52
CLCN3-208ENST00000512813 CFAP126Q5VTH2 177 aa5.57□□□□□ -1.52
CLCN3-208ENST00000512813 BPIFA4PQ86YQ2 179 aa5.57□□□□□ -1.52
CLCN3-208ENST00000512813 LYSMD2Q8IV50 215 aa5.57□□□□□ -1.52
CLCN3-208ENST00000512813 PRSS3P2Q8NHM4 247 aa5.57□□□□□ -1.52
CLCN3-208ENST00000512813 LHFPL5Q8TAF8 219 aa5.57□□□□□ -1.52
CLCN3-208ENST00000512813 MRPL53Q96EL3 112 aaKnown RBP5.57□□□□□ -1.52
CLCN3-208ENST00000512813 RBKSQ9H477 322 aa5.57□□□□□ -1.52
CLCN3-208ENST00000512813 USH2AO75445 5202 aa5.56□□□□□ -1.52
CLCN3-208ENST00000512813 IGLV10-54A0A075B6I4 117 aa5.56□□□□□ -1.52
CLCN3-208ENST00000512813 PRSS46E5RG02 174 aa5.56□□□□□ -1.52
CLCN3-208ENST00000512813 M0R3E3 92 aa5.56□□□□□ -1.52
CLCN3-208ENST00000512813 TSPAN13O95857 204 aa5.56□□□□□ -1.52
CLCN3-208ENST00000512813 IL5P05113 134 aa5.56□□□□□ -1.52
CLCN3-208ENST00000512813 KRTAP1-4P0C5Y4 121 aa5.56□□□□□ -1.52
CLCN3-208ENST00000512813 SULT1A3P0DMM9 295 aa5.56□□□□□ -1.52
CLCN3-208ENST00000512813 SULT1A4P0DMN0 295 aa5.56□□□□□ -1.52
CLCN3-208ENST00000512813 PATE2Q6UY27 113 aa5.56□□□□□ -1.52
CLCN3-208ENST00000512813 CYP2G1PQ6ZSU1 146 aa5.56□□□□□ -1.52
CLCN3-208ENST00000512813 ZNF546Q86UE3 836 aa5.56□□□□□ -1.52
CLCN3-208ENST00000512813 C15orf54Q8N8G6 183 aa5.56□□□□□ -1.52
CLCN3-208ENST00000512813 OR5H6Q8NGV6 325 aa5.56□□□□□ -1.52
CLCN3-208ENST00000512813 YIPF6Q96EC8 236 aa5.56□□□□□ -1.52
CLCN3-208ENST00000512813 C20orf85Q9H1P6 137 aa5.56□□□□□ -1.52
CLCN3-208ENST00000512813 IGHV3-73A0A0B4J1V6 119 aa5.55□□□□□ -1.52
CLCN3-208ENST00000512813 H3BQ15 152 aa5.55□□□□□ -1.52
CLCN3-208ENST00000512813 UBE2D1P51668 147 aa5.55□□□□□ -1.52
CLCN3-208ENST00000512813 RAB11AP62491 216 aa5.55□□□□□ -1.52
CLCN3-208ENST00000512813 SRPXP78539 464 aa5.55□□□□□ -1.52
CLCN3-208ENST00000512813 AKR1C1Q04828 323 aa5.55□□□□□ -1.52
CLCN3-208ENST00000512813 ARV1Q9H2C2 271 aa5.55□□□□□ -1.52
CLCN3-208ENST00000512813 SYNE2Q8WXH0 6885 aaKnown RBP5.54□□□□□ -1.52
CLCN3-208ENST00000512813 A0A096LNI7 61 aa5.54□□□□□ -1.52
CLCN3-208ENST00000512813 TRBV7-9A0A0J9YWB2 115 aa5.54□□□□□ -1.52
CLCN3-208ENST00000512813 TRDV1A0A1B0GX56 115 aa5.54□□□□□ -1.52
CLCN3-208ENST00000512813 H0Y9J4 135 aa5.54□□□□□ -1.52
CLCN3-208ENST00000512813 HOXB5P09067 269 aa5.54□□□□□ -1.52
CLCN3-208ENST00000512813 TMEM78Q5T7P6 136 aa5.54□□□□□ -1.52
CLCN3-208ENST00000512813 ZFP1Q6P2D0 407 aa5.54□□□□□ -1.52
CLCN3-208ENST00000512813 FAM159AQ6UWV7 190 aa5.54□□□□□ -1.52
CLCN3-208ENST00000512813 SELENOHQ8IZQ5 122 aaKnown RBP5.54□□□□□ -1.52
CLCN3-208ENST00000512813 GLYATL2Q8WU03 294 aa5.54□□□□□ -1.52
CLCN3-208ENST00000512813 ARL6Q9H0F7 186 aa5.54□□□□□ -1.52
CLCN3-208ENST00000512813 ZNF492Q9P255 531 aa5.54□□□□□ -1.52
CLCN3-208ENST00000512813 COPZ2Q9P299 210 aa5.54□□□□□ -1.52
CLCN3-208ENST00000512813 PTGES3LE9PB15 166 aa5.53□□□□□ -1.52
CLCN3-208ENST00000512813 GNAO1P09471 354 aa5.53□□□□□ -1.52
CLCN3-208ENST00000512813 SELENOTP62341 195 aa5.53□□□□□ -1.52
CLCN3-208ENST00000512813 ZNF266Q14584 549 aa5.53□□□□□ -1.52
CLCN3-208ENST00000512813 ASB16-AS1Q495Z4 193 aa5.53□□□□□ -1.52
CLCN3-208ENST00000512813 C22orf42Q6IC83 251 aa5.53□□□□□ -1.52
CLCN3-208ENST00000512813 LINC00305Q7Z4B0 112 aa5.53□□□□□ -1.52
CLCN3-208ENST00000512813 C8orf59Q8N0T1 100 aaPredicted RBP5.53□□□□□ -1.52
CLCN3-208ENST00000512813 CCDC197Q8NCU1 140 aa5.53□□□□□ -1.52
CLCN3-208ENST00000512813 KRTAP4-12Q9BQ66 201 aa5.53□□□□□ -1.52
CLCN3-208ENST00000512813 LINC00474Q9P2X8 69 aa5.53□□□□□ -1.52
CLCN3-208ENST00000512813 MACF1Q9UPN3 7388 aaKnown RBP5.52□□□□□ -1.53
CLCN3-208ENST00000512813 CTDSPLO15194 276 aa5.52□□□□□ -1.53
CLCN3-208ENST00000512813 ANGP03950 147 aaKnown RBP5.52□□□□□ -1.53
CLCN3-208ENST00000512813 GNGT1P63211 74 aa5.52□□□□□ -1.53
CLCN3-208ENST00000512813 SURF2Q15527 256 aaPredicted RBP5.52□□□□□ -1.53
CLCN3-208ENST00000512813 TMEM268Q5VZI3 342 aa5.52□□□□□ -1.53
CLCN3-208ENST00000512813 Q6AWC8 147 aa5.52□□□□□ -1.53
CLCN3-208ENST00000512813 LHFPL1Q86WI0 220 aa5.52□□□□□ -1.53
CLCN3-208ENST00000512813 PRR34Q9NV39 138 aa5.52□□□□□ -1.53
CLCN3-208ENST00000512813 NDUFB11Q9NX14 153 aa5.52□□□□□ -1.53
CLCN3-208ENST00000512813 Q9UF83 564 aa5.52□□□□□ -1.53
CLCN3-208ENST00000512813 MT-ND6P03923 174 aa5.51□□□□□ -1.53
CLCN3-208ENST00000512813 HIST1H1EP10412 219 aaKnown RBP5.51□□□□□ -1.53
CLCN3-208ENST00000512813 FGF8P55075 233 aaPredicted RBP5.51□□□□□ -1.53
CLCN3-208ENST00000512813 ZNF876PQ49A33 203 aa5.51□□□□□ -1.53
CLCN3-208ENST00000512813 MPV17L2Q567V2 206 aa5.51□□□□□ -1.53
CLCN3-208ENST00000512813 PXDC1Q5TGL8 231 aa5.51□□□□□ -1.53
CLCN3-208ENST00000512813 SUN5Q8TC36 379 aa5.51□□□□□ -1.53
CLCN3-208ENST00000512813 ATP5SQ99766 215 aa5.51□□□□□ -1.53
CLCN3-208ENST00000512813 MLST8Q9BVC4 326 aa5.51□□□□□ -1.53
CLCN3-208ENST00000512813 SAMD10Q9BYL1 202 aa5.51□□□□□ -1.53
CLCN3-208ENST00000512813 PAIP2BQ9ULR5 123 aaKnown RBP5.51□□□□□ -1.53
CLCN3-208ENST00000512813 PRELID1Q9Y255 219 aa5.51□□□□□ -1.53
CLCN3-208ENST00000512813 IGKV2-40A0A087WW87 121 aaPredicted RBP5.5□□□□□ -1.53
CLCN3-208ENST00000512813 K7EPK0 472 aa5.5□□□□□ -1.53
CLCN3-208ENST00000512813 GNRH2O43555 120 aa5.5□□□□□ -1.53
CLCN3-208ENST00000512813 IGKV2D-40P01614 121 aaPredicted RBP5.5□□□□□ -1.53
CLCN3-208ENST00000512813 RPS10P46783 165 aaKnown RBP5.5□□□□□ -1.53
CLCN3-208ENST00000512813 SMCO1Q147U7 214 aa5.5□□□□□ -1.53
CLCN3-208ENST00000512813 KRTAP19-2Q3LHN2 52 aa5.5□□□□□ -1.53
CLCN3-208ENST00000512813 C1orf137Q5JT78 98 aa5.5□□□□□ -1.53
CLCN3-208ENST00000512813 GPX8Q8TED1 209 aa5.5□□□□□ -1.53
CLCN3-208ENST00000512813 DUSP21Q9H596 190 aa5.5□□□□□ -1.53
CLCN3-208ENST00000512813 SLC39A9Q9NUM3 307 aa5.5□□□□□ -1.53
CLCN3-208ENST00000512813 DIRC3C9JPN6 131 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms