RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 SNURFLB1AK76 121 aa11.33□□□□□ -0.6
PDLIM5-212ENST00000509333 ZNF726P1Q15940 193 aa11.33□□□□□ -0.6
PDLIM5-212ENST00000509333 TVP23CQ96ET8 276 aa11.33□□□□□ -0.6
PDLIM5-212ENST00000509333 ST6GAL2Q96JF0 529 aa11.33□□□□□ -0.6
PDLIM5-212ENST00000509333 TP53TG3Q9ULZ0 132 aa11.33□□□□□ -0.6
PDLIM5-212ENST00000509333 BIRC6Q9NR09 4857 aa11.33□□□□□ -0.6
PDLIM5-212ENST00000509333 IGHV1OR15-1A0A075B7D0 117 aa11.32□□□□□ -0.6
PDLIM5-212ENST00000509333 GAGE12BA1L429 117 aa11.32□□□□□ -0.6
PDLIM5-212ENST00000509333 HMSDA8MTL9 139 aa11.32□□□□□ -0.6
PDLIM5-212ENST00000509333 GAGE7O76087 117 aa11.32□□□□□ -0.6
PDLIM5-212ENST00000509333 CXorf1O96002 111 aa11.32□□□□□ -0.6
PDLIM5-212ENST00000509333 GAGE12FP0CL80 117 aa11.32□□□□□ -0.6
PDLIM5-212ENST00000509333 GAGE12GP0CL81 117 aa11.32□□□□□ -0.6
PDLIM5-212ENST00000509333 GAGE12IP0CL82 117 aa11.32□□□□□ -0.6
PDLIM5-212ENST00000509333 GOLT1AQ6ZVE7 132 aa11.32□□□□□ -0.6
PDLIM5-212ENST00000509333 KCNRGQ8N5I3 272 aa11.32□□□□□ -0.6
PDLIM5-212ENST00000509333 KLF12Q9Y4X4 402 aa11.32□□□□□ -0.6
PDLIM5-212ENST00000509333 RGS13O14921 159 aa11.31□□□□□ -0.6
PDLIM5-212ENST00000509333 SUMO1P63165 101 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-212ENST00000509333 GNG5P63218 68 aa11.31□□□□□ -0.6
PDLIM5-212ENST00000509333 Q6AWC8 147 aa11.31□□□□□ -0.6
PDLIM5-212ENST00000509333 Q6ZTI0 123 aa11.31□□□□□ -0.6
PDLIM5-212ENST00000509333 ZNF680Q8NEM1 530 aa11.31□□□□□ -0.6
PDLIM5-212ENST00000509333 TMEM167BQ9NRX6 74 aa11.31□□□□□ -0.6
PDLIM5-212ENST00000509333 TRAV8-1A0A0A6YYK1 113 aa11.3□□□□□ -0.6
PDLIM5-212ENST00000509333 SPINK4O60575 86 aa11.3□□□□□ -0.6
PDLIM5-212ENST00000509333 RNF212Q495C1 297 aa11.3□□□□□ -0.6
PDLIM5-212ENST00000509333 C15orf53Q8NAA6 179 aa11.3□□□□□ -0.6
PDLIM5-212ENST00000509333 C18orf15Q96N68 181 aa11.3□□□□□ -0.6
PDLIM5-212ENST00000509333 TMPRSS5Q9H3S3 457 aa11.3□□□□□ -0.6
PDLIM5-212ENST00000509333 EPDR1Q9UM22 224 aa11.3□□□□□ -0.6
PDLIM5-212ENST00000509333 RPH3ALQ9UNE2 315 aa11.3□□□□□ -0.6
PDLIM5-212ENST00000509333 DNAH17Q9UFH2 4485 aa11.3□□□□□ -0.6
PDLIM5-212ENST00000509333 CTXND1A0A1B0GTU2 59 aa11.29□□□□□ -0.6
PDLIM5-212ENST00000509333 A0A1W2PRE2 83 aa11.29□□□□□ -0.6
PDLIM5-212ENST00000509333 TCRAP04437 139 aa11.29□□□□□ -0.6
PDLIM5-212ENST00000509333 HOXA5P20719 270 aa11.29□□□□□ -0.6
PDLIM5-212ENST00000509333 TCL1AP56279 114 aa11.29□□□□□ -0.6
PDLIM5-212ENST00000509333 OR5I1Q13606 314 aa11.29□□□□□ -0.6
PDLIM5-212ENST00000509333 IBA57Q5T440 356 aaKnown RBP11.29□□□□□ -0.6
PDLIM5-212ENST00000509333 C5orf17Q8NAS9 161 aa11.29□□□□□ -0.6
PDLIM5-212ENST00000509333 SGK494Q96LW2 274 aa11.29□□□□□ -0.6
PDLIM5-212ENST00000509333 DNAH2Q9P225 4427 aa11.28□□□□□ -0.6
PDLIM5-212ENST00000509333 IGLV2-11P01706 119 aa11.28□□□□□ -0.6
PDLIM5-212ENST00000509333 ZNF345Q14585 488 aa11.28□□□□□ -0.6
PDLIM5-212ENST00000509333 MUC21Q5SSG8 566 aa11.28□□□□□ -0.6
PDLIM5-212ENST00000509333 AKR1C8PQ5T2L2 129 aa11.28□□□□□ -0.6
PDLIM5-212ENST00000509333 ARPC5LQ9BPX5 153 aa11.28□□□□□ -0.6
PDLIM5-212ENST00000509333 TREM1Q9NP99 234 aa11.28□□□□□ -0.6
PDLIM5-212ENST00000509333 MDFICQ9P1T7 246 aa11.28□□□□□ -0.6
PDLIM5-212ENST00000509333 A0A0D9SG52 128 aa11.27□□□□□ -0.61
PDLIM5-212ENST00000509333 SERTM2A0A1B0GWG4 89 aa11.27□□□□□ -0.61
PDLIM5-212ENST00000509333 GGTLC3B5MD39 225 aa11.27□□□□□ -0.61
PDLIM5-212ENST00000509333 LGALS9BQ3B8N2 356 aa11.27□□□□□ -0.61
PDLIM5-212ENST00000509333 TDRG1Q3Y452 100 aa11.27□□□□□ -0.61
PDLIM5-212ENST00000509333 FRAS1Q86XX4 4008 aa11.26□□□□□ -0.61
PDLIM5-212ENST00000509333 MUC4Q99102 2169 aa11.26□□□□□ -0.61
PDLIM5-212ENST00000509333 TRGV1A0A0A0MS02 117 aa11.26□□□□□ -0.61
PDLIM5-212ENST00000509333 GNRH2O43555 120 aa11.26□□□□□ -0.61
PDLIM5-212ENST00000509333 NUDT3O95989 172 aa11.26□□□□□ -0.61
PDLIM5-212ENST00000509333 FGF8P55075 233 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-212ENST00000509333 PSG8Q9UQ74 426 aa11.26□□□□□ -0.61
PDLIM5-212ENST00000509333 TRAV26-1A0A087WT03 109 aa11.25□□□□□ -0.61
PDLIM5-212ENST00000509333 SEC11BP0C7V7 166 aa11.25□□□□□ -0.61
PDLIM5-212ENST00000509333 FAM159AQ6UWV7 190 aa11.25□□□□□ -0.61
PDLIM5-212ENST00000509333 Q6ZNX1 250 aa11.25□□□□□ -0.61
PDLIM5-212ENST00000509333 LINC00479Q96M42 142 aa11.25□□□□□ -0.61
PDLIM5-212ENST00000509333 TRGV2A0A075B6R0 118 aa11.24□□□□□ -0.61
PDLIM5-212ENST00000509333 TRAV21A0A0B4J279 112 aa11.24□□□□□ -0.61
PDLIM5-212ENST00000509333 K7EQM0 130 aa11.24□□□□□ -0.61
PDLIM5-212ENST00000509333 FHITP49789 147 aa11.24□□□□□ -0.61
PDLIM5-212ENST00000509333 ZNF80P51504 273 aaPredicted RBP11.24□□□□□ -0.61
PDLIM5-212ENST00000509333 TMEM183BQ1AE95 376 aa11.24□□□□□ -0.61
PDLIM5-212ENST00000509333 UBE2DNLQ8IWF7 75 aa11.24□□□□□ -0.61
PDLIM5-212ENST00000509333 IQCF2Q8IXL9 164 aa11.24□□□□□ -0.61
PDLIM5-212ENST00000509333 TMEM183AQ8IXX5 376 aa11.24□□□□□ -0.61
PDLIM5-212ENST00000509333 VSIG2Q96IQ7 327 aa11.24□□□□□ -0.61
PDLIM5-212ENST00000509333 NACAE9PAV3 2078 aa11.24□□□□□ -0.61
PDLIM5-212ENST00000509333 A0A0J9YY99 117 aa11.23□□□□□ -0.61
PDLIM5-212ENST00000509333 FAM74A7A6NL05 159 aa11.23□□□□□ -0.61
PDLIM5-212ENST00000509333 H3BNG1 76 aa11.23□□□□□ -0.61
PDLIM5-212ENST00000509333 M0R2N4 97 aa11.23□□□□□ -0.61
PDLIM5-212ENST00000509333 FAM3BP58499 235 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-212ENST00000509333 UBE2G2P60604 165 aa11.23□□□□□ -0.61
PDLIM5-212ENST00000509333 FLI1Q01543 452 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-212ENST00000509333 Q6ZR54 194 aa11.23□□□□□ -0.61
PDLIM5-212ENST00000509333 TMUB2Q71RG4 321 aa11.23□□□□□ -0.61
PDLIM5-212ENST00000509333 CYB561D1Q8N8Q1 229 aa11.23□□□□□ -0.61
PDLIM5-212ENST00000509333 MBD3L1Q8WWY6 194 aa11.23□□□□□ -0.61
PDLIM5-212ENST00000509333 RASL10AQ92737 203 aa11.23□□□□□ -0.61
PDLIM5-212ENST00000509333 C8orf49Q96NF6 230 aa11.23□□□□□ -0.61
PDLIM5-212ENST00000509333 SPXQ9BT56 116 aa11.23□□□□□ -0.61
PDLIM5-212ENST00000509333 NKX6-2Q9C056 277 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-212ENST00000509333 TRAV34A0A0B4J273 112 aa11.22□□□□□ -0.61
PDLIM5-212ENST00000509333 IGHV3-16A0A0C4DH30 117 aa11.22□□□□□ -0.61
PDLIM5-212ENST00000509333 MAP1LC3B2A6NCE7 125 aa11.22□□□□□ -0.61
PDLIM5-212ENST00000509333 FBLL1A6NHQ2 334 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-212ENST00000509333 F6UZH7 168 aa11.22□□□□□ -0.61
PDLIM5-212ENST00000509333 BCL2L11O43521 198 aa11.22□□□□□ -0.61
PDLIM5-212ENST00000509333 ZNF415Q09FC8 603 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms