RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 PYGO2Q9BRQ0 406 aa12.97□□□□□ -0.33
PDLIM7-216ENST00000506537 LENEPQ9Y5L5 61 aa12.97□□□□□ -0.33
PDLIM7-216ENST00000506537 VPS13DQ5THJ4 4388 aa12.96□□□□□ -0.33
PDLIM7-216ENST00000506537 LYRM9A8MSI8 78 aa12.96□□□□□ -0.33
PDLIM7-216ENST00000506537 C9orf62Q8N4C0 152 aa12.96□□□□□ -0.33
PDLIM7-216ENST00000506537 SGK494Q96LW2 274 aa12.96□□□□□ -0.33
PDLIM7-216ENST00000506537 LINC00467Q9BRT7 94 aa12.96□□□□□ -0.33
PDLIM7-216ENST00000506537 DEFB131BA0A096LNP1 70 aa12.95□□□□□ -0.34
PDLIM7-216ENST00000506537 FAM74A7A6NL05 159 aa12.95□□□□□ -0.34
PDLIM7-216ENST00000506537 MBD3L1Q8WWY6 194 aa12.95□□□□□ -0.34
PDLIM7-216ENST00000506537 EPDR1Q9UM22 224 aa12.95□□□□□ -0.34
PDLIM7-216ENST00000506537 SERTM2A0A1B0GWG4 89 aa12.94□□□□□ -0.34
PDLIM7-216ENST00000506537 IGLV2-11P01706 119 aa12.94□□□□□ -0.34
PDLIM7-216ENST00000506537 DAD1P61803 113 aa12.94□□□□□ -0.34
PDLIM7-216ENST00000506537 CCDC28AQ8IWP9 274 aa12.94□□□□□ -0.34
PDLIM7-216ENST00000506537 NOP10Q9NPE3 64 aaKnown RBP12.94□□□□□ -0.34
PDLIM7-216ENST00000506537 TIMM8BQ9Y5J9 83 aaPredicted RBP12.94□□□□□ -0.34
PDLIM7-216ENST00000506537 IGLL5B9A064 214 aa12.93□□□□□ -0.34
PDLIM7-216ENST00000506537 Q6AWC8 147 aa12.93□□□□□ -0.34
PDLIM7-216ENST00000506537 DPPA3Q6W0C5 159 aa12.93□□□□□ -0.34
PDLIM7-216ENST00000506537 EIF4E3Q8N5X7 224 aaKnown RBP12.93□□□□□ -0.34
PDLIM7-216ENST00000506537 CYB561D1Q8N8Q1 229 aa12.93□□□□□ -0.34
PDLIM7-216ENST00000506537 C11orf72Q8NBR9 251 aa12.93□□□□□ -0.34
PDLIM7-216ENST00000506537 SFT2D1Q8WV19 159 aa12.93□□□□□ -0.34
PDLIM7-216ENST00000506537 LINC00476Q8WZB0 136 aa12.93□□□□□ -0.34
PDLIM7-216ENST00000506537 ATG101Q9BSB4 218 aa12.93□□□□□ -0.34
PDLIM7-216ENST00000506537 TP53TG3Q9ULZ0 132 aa12.93□□□□□ -0.34
PDLIM7-216ENST00000506537 IGHV1OR15-1A0A075B7D0 117 aa12.92□□□□□ -0.34
PDLIM7-216ENST00000506537 A0A1B0GV50 99 aa12.92□□□□□ -0.34
PDLIM7-216ENST00000506537 F6UZH7 168 aa12.92□□□□□ -0.34
PDLIM7-216ENST00000506537 DEFB130BP0DP73 79 aa12.92□□□□□ -0.34
PDLIM7-216ENST00000506537 DEFB130AP0DP74 79 aa12.92□□□□□ -0.34
PDLIM7-216ENST00000506537 ANXA2RQ3ZCQ2 193 aa12.92□□□□□ -0.34
PDLIM7-216ENST00000506537 ZFP69Q49AA0 526 aa12.92□□□□□ -0.34
PDLIM7-216ENST00000506537 APLNQ9ULZ1 77 aa12.92□□□□□ -0.34
PDLIM7-216ENST00000506537 IGHV4-4A0A075B6R2 117 aa12.91□□□□□ -0.34
PDLIM7-216ENST00000506537 CBY3A6NI87 242 aa12.91□□□□□ -0.34
PDLIM7-216ENST00000506537 RGS13O14921 159 aa12.91□□□□□ -0.34
PDLIM7-216ENST00000506537 IFNA7P01567 189 aa12.91□□□□□ -0.34
PDLIM7-216ENST00000506537 SLC51BQ86UW2 128 aa12.91□□□□□ -0.34
PDLIM7-216ENST00000506537 LINC00612Q8N6U2 182 aa12.91□□□□□ -0.34
PDLIM7-216ENST00000506537 TMEM75Q8N9X5 138 aa12.91□□□□□ -0.34
PDLIM7-216ENST00000506537 LINC00479Q96M42 142 aa12.91□□□□□ -0.34
PDLIM7-216ENST00000506537 C8orf49Q96NF6 230 aa12.91□□□□□ -0.34
PDLIM7-216ENST00000506537 TREM1Q9NP99 234 aa12.91□□□□□ -0.34
PDLIM7-216ENST00000506537 PSG8Q9UQ74 426 aa12.91□□□□□ -0.34
PDLIM7-216ENST00000506537 K7EQM0 130 aa12.9□□□□□ -0.34
PDLIM7-216ENST00000506537 PEX7O00628 323 aa12.9□□□□□ -0.34
PDLIM7-216ENST00000506537 H2AFB1P0C5Y9 115 aa12.9□□□□□ -0.34
PDLIM7-216ENST00000506537 HTN3P15516 51 aa12.9□□□□□ -0.34
PDLIM7-216ENST00000506537 ATP5G3P48201 142 aa12.9□□□□□ -0.34
PDLIM7-216ENST00000506537 FLI1Q01543 452 aaPredicted RBP12.9□□□□□ -0.34
PDLIM7-216ENST00000506537 MUC21Q5SSG8 566 aa12.9□□□□□ -0.34
PDLIM7-216ENST00000506537 ZNF680Q8NEM1 530 aa12.9□□□□□ -0.34
PDLIM7-216ENST00000506537 NKX6-2Q9C056 277 aaPredicted RBP12.9□□□□□ -0.34
PDLIM7-216ENST00000506537 GSN-AS1Q9NRJ2 163 aa12.9□□□□□ -0.34
PDLIM7-216ENST00000506537 ARL2-SNX15V9GYD0 113 aa12.9□□□□□ -0.34
PDLIM7-216ENST00000506537 KMT2AQ03164 3969 aa12.89□□□□□ -0.35
PDLIM7-216ENST00000506537 TRAV34A0A0B4J273 112 aa12.89□□□□□ -0.35
PDLIM7-216ENST00000506537 SNURFLB1AK76 121 aa12.89□□□□□ -0.35
PDLIM7-216ENST00000506537 DAZ2Q13117 558 aaKnown RBP12.89□□□□□ -0.35
PDLIM7-216ENST00000506537 PAGE4O60829 102 aa12.88□□□□□ -0.35
PDLIM7-216ENST00000506537 SULT1A2P50226 295 aa12.88□□□□□ -0.35
PDLIM7-216ENST00000506537 ZNF80P51504 273 aaPredicted RBP12.88□□□□□ -0.35
PDLIM7-216ENST00000506537 NKX2-5P52952 324 aaPredicted RBP12.88□□□□□ -0.35
PDLIM7-216ENST00000506537 TCTAP57738 103 aa12.88□□□□□ -0.35
PDLIM7-216ENST00000506537 CST9LP1Q5W188 147 aa12.88□□□□□ -0.35
PDLIM7-216ENST00000506537 EIF5AL1Q6IS14 154 aaKnown RBP12.88□□□□□ -0.35
PDLIM7-216ENST00000506537 PRNTQ86SH4 94 aa12.88□□□□□ -0.35
PDLIM7-216ENST00000506537 KLF12Q9Y4X4 402 aa12.88□□□□□ -0.35
PDLIM7-216ENST00000506537 DNAH6Q9C0G6 4158 aa12.88□□□□□ -0.35
PDLIM7-216ENST00000506537 BIRC6Q9NR09 4857 aa12.87□□□□□ -0.35
PDLIM7-216ENST00000506537 RAB5CP51148 216 aa12.87□□□□□ -0.35
PDLIM7-216ENST00000506537 TCL1AP56279 114 aa12.87□□□□□ -0.35
PDLIM7-216ENST00000506537 CCL20P78556 96 aa12.87□□□□□ -0.35
PDLIM7-216ENST00000506537 IBA57Q5T440 356 aaKnown RBP12.87□□□□□ -0.35
PDLIM7-216ENST00000506537 Q6ZTI0 123 aa12.87□□□□□ -0.35
PDLIM7-216ENST00000506537 Q86TA4 180 aa12.87□□□□□ -0.35
PDLIM7-216ENST00000506537 HIST1H2BAQ96A08 127 aa12.87□□□□□ -0.35
PDLIM7-216ENST00000506537 NDFIP1Q9BT67 221 aa12.87□□□□□ -0.35
PDLIM7-216ENST00000506537 TRAV21A0A0B4J279 112 aa12.86□□□□□ -0.35
PDLIM7-216ENST00000506537 GAGE12BA1L429 117 aa12.86□□□□□ -0.35
PDLIM7-216ENST00000506537 FBLL1A6NHQ2 334 aaKnown RBP12.86□□□□□ -0.35
PDLIM7-216ENST00000506537 GAGE7O76087 117 aa12.86□□□□□ -0.35
PDLIM7-216ENST00000506537 LY6G6CO95867 125 aa12.86□□□□□ -0.35
PDLIM7-216ENST00000506537 GAGE12FP0CL80 117 aa12.86□□□□□ -0.35
PDLIM7-216ENST00000506537 GAGE12GP0CL81 117 aa12.86□□□□□ -0.35
PDLIM7-216ENST00000506537 GAGE12IP0CL82 117 aa12.86□□□□□ -0.35
PDLIM7-216ENST00000506537 NAGKQ9UJ70 344 aa12.86□□□□□ -0.35
PDLIM7-216ENST00000506537 EPPK1P58107 5090 aaKnown RBP12.85□□□□□ -0.35
PDLIM7-216ENST00000506537 TRAV1-1A0A0B4J248 108 aa12.85□□□□□ -0.35
PDLIM7-216ENST00000506537 GCGP01275 180 aa12.85□□□□□ -0.35
PDLIM7-216ENST00000506537 ATP5G1P05496 136 aa12.85□□□□□ -0.35
PDLIM7-216ENST00000506537 TMEM183BQ1AE95 376 aa12.85□□□□□ -0.35
PDLIM7-216ENST00000506537 TDRG1Q3Y452 100 aa12.85□□□□□ -0.35
PDLIM7-216ENST00000506537 TMEM88Q6PEY1 159 aa12.85□□□□□ -0.35
PDLIM7-216ENST00000506537 TMEM183AQ8IXX5 376 aa12.85□□□□□ -0.35
PDLIM7-216ENST00000506537 TCEAL7Q9BRU2 100 aa12.85□□□□□ -0.35
PDLIM7-216ENST00000506537 NDUFAF3Q9BU61 184 aa12.85□□□□□ -0.35
PDLIM7-216ENST00000506537 MDFICQ9P1T7 246 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms