RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 RPS3P23396 243 aaKnown RBP eCLIP1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 SSR2P43308 183 aa1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 KLRD1Q13241 179 aa1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 CCDC153Q494R4 210 aa1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 HRCT1Q6UXD1 115 aa1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 LINC00311Q8N616 119 aa1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 TMEM229BQ8NBD8 167 aa1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 MAFIPQ8WZ33 124 aa1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 LZICQ8WZA0 190 aa1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 RETNLBQ9BQ08 111 aa1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 TAS2R7Q9NYW3 318 aa1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 JPT1Q9UK76 154 aa1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 DDX60Q8IY21 1712 aaKnown RBP1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 SSC5DA1L4H1 1573 aa1.78□□□□□ -2.12
TRAPPC13-208ENST00000505553 TRAV36DV7A0A075B6V5 113 aa1.78□□□□□ -2.12
TRAPPC13-208ENST00000505553 IGHV1-58A0A0C4DH39 117 aa1.78□□□□□ -2.12
TRAPPC13-208ENST00000505553 K7ERJ3 54 aa1.78□□□□□ -2.12
TRAPPC13-208ENST00000505553 OR1I1O60431 355 aa1.78□□□□□ -2.12
TRAPPC13-208ENST00000505553 PSG9Q00887 426 aa1.78□□□□□ -2.12
TRAPPC13-208ENST00000505553 OR8B8Q15620 311 aa1.78□□□□□ -2.12
TRAPPC13-208ENST00000505553 COA5Q86WW8 74 aa1.78□□□□□ -2.12
TRAPPC13-208ENST00000505553 Q8IYB0 196 aa1.78□□□□□ -2.12
TRAPPC13-208ENST00000505553 OR2T35Q8NGX2 323 aa1.78□□□□□ -2.12
TRAPPC13-208ENST00000505553 RASL12Q9NYN1 266 aa1.78□□□□□ -2.12
TRAPPC13-208ENST00000505553 ANKRD11Q6UB99 2663 aaPredicted RBP1.78□□□□□ -2.12
TRAPPC13-208ENST00000505553 HTTP42858 3142 aa1.78□□□□□ -2.12
TRAPPC13-208ENST00000505553 UNC79Q9P2D8 2635 aa1.78□□□□□ -2.12
TRAPPC13-208ENST00000505553 KIF20BQ96Q89 1820 aa1.78□□□□□ -2.13
TRAPPC13-208ENST00000505553 DDX60LQ5H9U9 1706 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 CENPFP49454 3210 aa1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 ZFHX2Q9C0A1 2572 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 SPTBN4Q9H254 2564 aa1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 TRAV14DV4A0A0A6YYC5 116 aa1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 TRAV12-1A0A0B4J245 112 aa1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 TRBV7-6A0A0J9YX20 115 aa1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 ARPC5O15511 151 aa1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 DBIP07108 87 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 RAB5CP51148 216 aa1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 VMA21Q3ZAQ7 101 aa1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 FP248Q71RG6 208 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 LINC00305Q7Z4B0 112 aa1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 TMEM254Q8TBM7 123 aa1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 SFT2D1Q8WV19 159 aa1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 CHCHD1Q96BP2 118 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 GSKIPQ9P0R6 139 aa1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 DUOX1Q9NRD9 1551 aa1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 MYH7BA7E2Y1 1941 aa1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 ALPK3Q96L96 1907 aa1.77□□□□□ -2.13
TRAPPC13-208ENST00000505553 TPRP12270 2363 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-208ENST00000505553 A0A087WX48 190 aa1.76□□□□□ -2.13
TRAPPC13-208ENST00000505553 LYRM1O43325 122 aa1.76□□□□□ -2.13
TRAPPC13-208ENST00000505553 MT-ND6P03923 174 aa1.76□□□□□ -2.13
TRAPPC13-208ENST00000505553 BRS3P32247 399 aa1.76□□□□□ -2.13
TRAPPC13-208ENST00000505553 SRP9P49458 86 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-208ENST00000505553 PDE6HQ13956 83 aa1.76□□□□□ -2.13
TRAPPC13-208ENST00000505553 OR8I2Q8N0Y5 310 aa1.76□□□□□ -2.13
TRAPPC13-208ENST00000505553 OR4B1Q8NGF8 309 aa1.76□□□□□ -2.13
TRAPPC13-208ENST00000505553 ZCCHC13Q8WW36 166 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-208ENST00000505553 NCOR2Q9Y618 2525 aa1.76□□□□□ -2.13
TRAPPC13-208ENST00000505553 NUP210LQ5VU65 1888 aa1.76□□□□□ -2.13
TRAPPC13-208ENST00000505553 MUC3AQ02505 3323 aa1.76□□□□□ -2.13
TRAPPC13-208ENST00000505553 PTPRZ1P23471 2315 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-208ENST00000505553 ACACBO00763 2458 aa1.76□□□□□ -2.13
TRAPPC13-208ENST00000505553 PTPRBP23467 1997 aa1.76□□□□□ -2.13
TRAPPC13-208ENST00000505553 C2orf70A6NJV1 201 aa1.75□□□□□ -2.13
TRAPPC13-208ENST00000505553 ROMO1P60602 79 aa1.75□□□□□ -2.13
TRAPPC13-208ENST00000505553 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
TRAPPC13-208ENST00000505553 C4orf22Q6V702 233 aa1.75□□□□□ -2.13
TRAPPC13-208ENST00000505553 FAM216BQ8N7L0 139 aa1.75□□□□□ -2.13
TRAPPC13-208ENST00000505553 OR5D14Q8NGL3 314 aa1.75□□□□□ -2.13
TRAPPC13-208ENST00000505553 OR5H6Q8NGV6 325 aa1.75□□□□□ -2.13
TRAPPC13-208ENST00000505553 POP5Q969H6 163 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-208ENST00000505553 LRRC37A2A6NM11 1700 aa1.75□□□□□ -2.13
TRAPPC13-208ENST00000505553 LAMA2P24043 3122 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-208ENST00000505553 MED23Q9ULK4 1368 aa1.75□□□□□ -2.13
TRAPPC13-208ENST00000505553 NUP98P52948 1817 aa1.75□□□□□ -2.13
TRAPPC13-208ENST00000505553 DOCK4Q8N1I0 1966 aa1.75□□□□□ -2.13
TRAPPC13-208ENST00000505553 FASNP49327 2511 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-208ENST00000505553 MYO9BQ13459 2157 aa1.75□□□□□ -2.13
TRAPPC13-208ENST00000505553 HEATR5AQ86XA9 2040 aa1.75□□□□□ -2.13
TRAPPC13-208ENST00000505553 LRRC37AA6NMS7 1700 aa1.75□□□□□ -2.13
TRAPPC13-208ENST00000505553 FAM208BQ5VWN6 2430 aa1.75□□□□□ -2.13
TRAPPC13-208ENST00000505553 TRAV13-1A0A0B4J241 112 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 LOC107984640A0A0U1RRK4 108 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 TMEM189A5PLL7 270 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 M0R233 179 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 DPM2O94777 84 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 DEFB103AP81534 67 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 MRPS36P82909 103 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 C2orf82Q6UX34 121 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 C4orf3Q8WVX3 66 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 BORCS5Q969J3 196 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 MUCL1Q96DR8 90 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 Q96M85 177 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 PRELID3AQ96N28 172 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 SOX21Q9Y651 276 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 MAST4O15021 2626 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 FLNBO75369 2602 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 NCKAP5O14513 1909 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 LAMB1P07942 1786 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms