RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 LRRC29Q8WV35 223 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 CCL17Q92583 94 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 VSIG2Q96IQ7 327 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 C18orf15Q96N68 181 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 HIST1H4GQ99525 98 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 CCL13Q99616 98 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 SMIM7Q9BQ49 75 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 UPK3BQ9BT76 320 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 RNF126Q9BV68 326 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 SLC25A15Q9Y619 301 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 TIAM2Q8IVF5 1701 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 NRXN2Q9P2S2 1712 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 COL1A1P02452 1464 aaPredicted RBP1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 RLFQ13129 1914 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 MYLKQ15746 1914 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 SCN1AP35498 2009 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 NYNRINQ9P2P1 1898 aaKnown RBP1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 MYO10Q9HD67 2058 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 CHD3Q12873 2000 aaKnown RBP1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 MICAL3Q7RTP6 2002 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 TRBV20OR9-2A0A075B6H5 130 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 IGHV3OR15-7A0A075B7D8 119 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 IGHV1OR21-1A0A087WYE8 117 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 A0A087WZ39 114 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 TRAV3A0A0B4J244 114 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 TRAV41A0A0B4J266 112 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 MDFIC2A0A1B0GVS7 189 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 IBA57-AS1B1ANH7 110 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 F6UB75 175 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 K7EM74 188 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 CCL24O00175 119 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 CCL16O15467 120 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 NUPR1O60356 82 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 FSTL3O95633 263 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 CPSF4O95639 269 aaKnown RBP1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 TCL1BO95988 128 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 NPYP01303 97 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 FCGR2CP31995 323 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 INSL3P51460 131 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 SYNJ2BPP57105 145 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 UBE2D3P61077 147 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 PCBD1P61457 104 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 SNRPD3P62318 126 aaKnown RBP1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 UBE2D2P62837 147 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 PRR3P79522 188 aaKnown RBP1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 SERF2P84101 59 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 ATP1A1-AS1Q5TC04 95 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 SLC48A1Q6P1K1 146 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 C6orf201Q7Z4U5 140 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 ATP5L2Q7Z4Y8 100 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 MARCH3Q86UD3 253 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 PDPNQ86YL7 162 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 MKXQ8IYA7 352 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 TMEM252Q8N6L7 170 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 TMEM75Q8N9X5 138 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 C10orf105Q8TEF2 133 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 ZNF721Q8TF20 911 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 KLK6Q92876 244 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 IFI27L1Q96BM0 104 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 RNF185Q96GF1 192 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 ODF3Q96PU9 254 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 DSCR8Q96T75 97 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 C11orf68Q9H3H3 251 aaKnown RBP1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 ESM1Q9NQ30 184 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 IL36BQ9NZH7 164 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 ARL2-SNX15V9GYD0 113 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 DLEC1Q9Y238 1755 aa1.41□□□□□ -2.18
HMGB3P17-201ENST00000504195 SIP14410 1827 aa1.4□□□□□ -2.18
HMGB3P17-201ENST00000504195 VWA8A3KMH1 1905 aa1.4□□□□□ -2.18
HMGB3P17-201ENST00000504195 FANCMQ8IYD8 2048 aa1.4□□□□□ -2.18
HMGB3P17-201ENST00000504195 TNRC6AQ8NDV7 1962 aaKnown RBP1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 PAPPA2Q9BXP8 1791 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 CD163L1Q9NR16 1453 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 MYMXA0A1B0GTQ4 84 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 LOC389332A0A1B0GUA5 103 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 TCRBV4S1A1TA0A5B7 111 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 C9JCJ5 164 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 E7EQL1 145 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 H3BP45 60 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 M0R378 163 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 M0R381 172 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 LST1O00453 97 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 FFAR1O14842 300 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 ZNF73O43830 326 aaPredicted RBP1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 LEPROTL1O95214 131 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 SLC25A14O95258 325 aaPredicted RBP1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGLV3-27P01718 113 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 TRBV12-3P01733 135 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 IL4P05112 153 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 SAA1P0DJI8 122 aaPredicted RBP1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 ZNF823P16415 610 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 S100A4P26447 101 aaKnown RBP1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 GCHFRP30047 84 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 PEBP1P30086 187 aaKnown RBP1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 CD70P32970 193 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 CKS2P33552 79 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 MP68P56378 58 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 DSCR4P56555 118 aaPredicted RBP1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms