RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 NKX6-2Q9C056 277 aaPredicted RBP11.99□□□□□ -0.49
PRKCB-210ENST00000498739 PLAC8L1A1L4L8 177 aa11.98□□□□□ -0.49
PRKCB-210ENST00000498739 CST9LP1Q5W188 147 aa11.98□□□□□ -0.49
PRKCB-210ENST00000498739 ZNF493Q6ZR52 646 aa11.98□□□□□ -0.49
PRKCB-210ENST00000498739 RNASE8Q8TDE3 154 aaKnown RBP11.98□□□□□ -0.49
PRKCB-210ENST00000498739 NDFIP1Q9BT67 221 aa11.98□□□□□ -0.49
PRKCB-210ENST00000498739 TREM1Q9NP99 234 aa11.98□□□□□ -0.49
PRKCB-210ENST00000498739 C11orf94C9JXX5 98 aa11.97□□□□□ -0.49
PRKCB-210ENST00000498739 F6UZH7 168 aa11.97□□□□□ -0.49
PRKCB-210ENST00000498739 PEX7O00628 323 aa11.97□□□□□ -0.49
PRKCB-210ENST00000498739 RGS13O14921 159 aa11.97□□□□□ -0.49
PRKCB-210ENST00000498739 PAGE4O60829 102 aa11.97□□□□□ -0.49
PRKCB-210ENST00000498739 FLI1Q01543 452 aaPredicted RBP11.97□□□□□ -0.49
PRKCB-210ENST00000498739 Q6ZQT7 251 aa11.97□□□□□ -0.49
PRKCB-210ENST00000498739 EIF4E3Q8N5X7 224 aaKnown RBP11.97□□□□□ -0.49
PRKCB-210ENST00000498739 TMEM75Q8N9X5 138 aa11.97□□□□□ -0.49
PRKCB-210ENST00000498739 TVP23CQ96ET8 276 aa11.97□□□□□ -0.49
PRKCB-210ENST00000498739 PSG8Q9UQ74 426 aa11.97□□□□□ -0.49
PRKCB-210ENST00000498739 KLK5Q9Y337 293 aaPredicted RBP11.97□□□□□ -0.49
PRKCB-210ENST00000498739 ARL2-SNX15V9GYD0 113 aa11.97□□□□□ -0.49
PRKCB-210ENST00000498739 STARD9Q9P2P6 4700 aa11.96□□□□□ -0.49
PRKCB-210ENST00000498739 TRAV10A0A0B4J240 114 aa11.96□□□□□ -0.49
PRKCB-210ENST00000498739 CBY3A6NI87 242 aa11.96□□□□□ -0.49
PRKCB-210ENST00000498739 LYRM9A8MSI8 78 aa11.96□□□□□ -0.49
PRKCB-210ENST00000498739 IGLV2-11P01706 119 aa11.96□□□□□ -0.49
PRKCB-210ENST00000498739 ATP5G3P48201 142 aa11.96□□□□□ -0.49
PRKCB-210ENST00000498739 PRNTQ86SH4 94 aa11.96□□□□□ -0.49
PRKCB-210ENST00000498739 HIST1H2BAQ96A08 127 aa11.96□□□□□ -0.49
PRKCB-210ENST00000498739 LINC00479Q96M42 142 aa11.96□□□□□ -0.49
PRKCB-210ENST00000498739 LINC00467Q9BRT7 94 aa11.96□□□□□ -0.49
PRKCB-210ENST00000498739 BOLA1Q9Y3E2 137 aa11.96□□□□□ -0.49
PRKCB-210ENST00000498739 IGHV1OR15-1A0A075B7D0 117 aa11.95□□□□□ -0.5
PRKCB-210ENST00000498739 TRAV34A0A0B4J273 112 aa11.95□□□□□ -0.5
PRKCB-210ENST00000498739 FBLL1A6NHQ2 334 aaKnown RBP11.95□□□□□ -0.5
PRKCB-210ENST00000498739 TEX46H3BTG2 121 aa11.95□□□□□ -0.5
PRKCB-210ENST00000498739 PPT1P50897 306 aa11.95□□□□□ -0.5
PRKCB-210ENST00000498739 DAD1P61803 113 aa11.95□□□□□ -0.5
PRKCB-210ENST00000498739 Q6AWC8 147 aa11.95□□□□□ -0.5
PRKCB-210ENST00000498739 NOP10Q9NPE3 64 aaKnown RBP11.95□□□□□ -0.5
PRKCB-210ENST00000498739 TIMM8BQ9Y5J9 83 aaPredicted RBP11.95□□□□□ -0.5
PRKCB-210ENST00000498739 SNURFLB1AK76 121 aa11.94□□□□□ -0.5
PRKCB-210ENST00000498739 ANXA2RQ3ZCQ2 193 aa11.94□□□□□ -0.5
PRKCB-210ENST00000498739 MUC21Q5SSG8 566 aa11.94□□□□□ -0.5
PRKCB-210ENST00000498739 ALKAL2Q6UX46 152 aa11.94□□□□□ -0.5
PRKCB-210ENST00000498739 C2CD4CQ8TF44 421 aa11.94□□□□□ -0.5
PRKCB-210ENST00000498739 C8orf49Q96NF6 230 aa11.94□□□□□ -0.5
PRKCB-210ENST00000498739 CSMD3Q7Z407 3707 aa11.94□□□□□ -0.5
PRKCB-210ENST00000498739 DEFB131BA0A096LNP1 70 aa11.93□□□□□ -0.5
PRKCB-210ENST00000498739 TRAV1-1A0A0B4J248 108 aa11.93□□□□□ -0.5
PRKCB-210ENST00000498739 DEFB130BP0DP73 79 aa11.93□□□□□ -0.5
PRKCB-210ENST00000498739 DEFB130AP0DP74 79 aa11.93□□□□□ -0.5
PRKCB-210ENST00000498739 CCL20P78556 96 aa11.93□□□□□ -0.5
PRKCB-210ENST00000498739 ZNF680Q8NEM1 530 aa11.93□□□□□ -0.5
PRKCB-210ENST00000498739 TCEAL7Q9BRU2 100 aa11.93□□□□□ -0.5
PRKCB-210ENST00000498739 GNG13Q9P2W3 67 aa11.93□□□□□ -0.5
PRKCB-210ENST00000498739 NAGKQ9UJ70 344 aa11.93□□□□□ -0.5
PRKCB-210ENST00000498739 TP53TG3Q9ULZ0 132 aa11.93□□□□□ -0.5
PRKCB-210ENST00000498739 TRAV21A0A0B4J279 112 aa11.92□□□□□ -0.5
PRKCB-210ENST00000498739 UBE2G1P62253 170 aa11.92□□□□□ -0.5
PRKCB-210ENST00000498739 SAPCD1Q5SSQ6 148 aa11.92□□□□□ -0.5
PRKCB-210ENST00000498739 FAM159AQ6UWV7 190 aa11.92□□□□□ -0.5
PRKCB-210ENST00000498739 Q86TA4 180 aa11.92□□□□□ -0.5
PRKCB-210ENST00000498739 MANBALQ9NQG1 85 aa11.92□□□□□ -0.5
PRKCB-210ENST00000498739 GSN-AS1Q9NRJ2 163 aa11.92□□□□□ -0.5
PRKCB-210ENST00000498739 IGLL5B9A064 214 aa11.91□□□□□ -0.5
PRKCB-210ENST00000498739 GCGP01275 180 aa11.91□□□□□ -0.5
PRKCB-210ENST00000498739 HTN3P15516 51 aa11.91□□□□□ -0.5
PRKCB-210ENST00000498739 AKR1C3P42330 323 aa11.91□□□□□ -0.5
PRKCB-210ENST00000498739 SMUG1Q53HV7 270 aa11.91□□□□□ -0.5
PRKCB-210ENST00000498739 C11orf72Q8NBR9 251 aa11.91□□□□□ -0.5
PRKCB-210ENST00000498739 FMC1Q96HJ9 113 aa11.91□□□□□ -0.5
PRKCB-210ENST00000498739 ZNF80P51504 273 aaPredicted RBP11.9□□□□□ -0.5
PRKCB-210ENST00000498739 IBA57Q5T440 356 aaKnown RBP11.9□□□□□ -0.5
PRKCB-210ENST00000498739 SCO2A0A1W2PP80 73 aa11.89□□□□□ -0.51
PRKCB-210ENST00000498739 IFNA1P01562 189 aa11.89□□□□□ -0.51
PRKCB-210ENST00000498739 TCL1AP56279 114 aa11.89□□□□□ -0.51
PRKCB-210ENST00000498739 ZNF415Q09FC8 603 aa11.89□□□□□ -0.51
PRKCB-210ENST00000498739 DAZ2Q13117 558 aaKnown RBP11.89□□□□□ -0.51
PRKCB-210ENST00000498739 TMEM183BQ1AE95 376 aa11.89□□□□□ -0.51
PRKCB-210ENST00000498739 TMEM183AQ8IXX5 376 aa11.89□□□□□ -0.51
PRKCB-210ENST00000498739 KLF12Q9Y4X4 402 aa11.89□□□□□ -0.51
PRKCB-210ENST00000498739 TRGV11A0A075B6L2 103 aa11.88□□□□□ -0.51
PRKCB-210ENST00000498739 GAGE12BA1L429 117 aa11.88□□□□□ -0.51
PRKCB-210ENST00000498739 GAGE7O76087 117 aa11.88□□□□□ -0.51
PRKCB-210ENST00000498739 PFN1P07737 140 aaKnown RBP11.88□□□□□ -0.51
PRKCB-210ENST00000498739 GAGE12FP0CL80 117 aa11.88□□□□□ -0.51
PRKCB-210ENST00000498739 GAGE12GP0CL81 117 aa11.88□□□□□ -0.51
PRKCB-210ENST00000498739 GAGE12IP0CL82 117 aa11.88□□□□□ -0.51
PRKCB-210ENST00000498739 DYNC2H1Q8NCM8 4307 aaKnown RBP11.87□□□□□ -0.51
PRKCB-210ENST00000498739 IGHV4-4A0A075B6R2 117 aa11.87□□□□□ -0.51
PRKCB-210ENST00000498739 LCE6AA0A183 80 aa11.87□□□□□ -0.51
PRKCB-210ENST00000498739 ATP5G1P05496 136 aa11.87□□□□□ -0.51
PRKCB-210ENST00000498739 BLOC1S1P78537 153 aa11.87□□□□□ -0.51
PRKCB-210ENST00000498739 TDRG1Q3Y452 100 aa11.87□□□□□ -0.51
PRKCB-210ENST00000498739 KCNS1Q96KK3 526 aa11.87□□□□□ -0.51
PRKCB-210ENST00000498739 SDF2L1Q9HCN8 221 aa11.87□□□□□ -0.51
PRKCB-210ENST00000498739 MDFICQ9P1T7 246 aa11.87□□□□□ -0.51
PRKCB-210ENST00000498739 ZFP30Q9Y2G7 519 aa11.87□□□□□ -0.51
PRKCB-210ENST00000498739 TRGV1A0A0A0MS02 117 aa11.86□□□□□ -0.51
PRKCB-210ENST00000498739 TRBV6-1A0A0K0K1D8 114 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms