RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 PRNTQ86SH4 94 aa6.91□□□□□ -1.3
FN1-227ENST00000498719 EEF1AKMT3Q96AZ1 226 aa6.91□□□□□ -1.3
FN1-227ENST00000498719 FMC1Q96HJ9 113 aa6.91□□□□□ -1.3
FN1-227ENST00000498719 RASL11BQ9BPW5 248 aa6.91□□□□□ -1.3
FN1-227ENST00000498719 MRPL27Q9P0M9 148 aaKnown RBP6.91□□□□□ -1.3
FN1-227ENST00000498719 FAM181BA6NEQ2 426 aa6.91□□□□□ -1.3
FN1-227ENST00000498719 LY6LH3BQJ8 138 aa6.91□□□□□ -1.3
FN1-227ENST00000498719 K7EIM0 57 aa6.91□□□□□ -1.3
FN1-227ENST00000498719 IGLV2-11P01706 119 aa6.91□□□□□ -1.3
FN1-227ENST00000498719 CA7P43166 264 aa6.91□□□□□ -1.3
FN1-227ENST00000498719 HBBP68871 147 aa6.91□□□□□ -1.3
FN1-227ENST00000498719 A8MWL6 223 aa6.9□□□□□ -1.3
FN1-227ENST00000498719 K7ENP7 123 aa6.9□□□□□ -1.3
FN1-227ENST00000498719 CCL21O00585 134 aa6.9□□□□□ -1.3
FN1-227ENST00000498719 IGLC2P0DOY2 106 aa6.9□□□□□ -1.3
FN1-227ENST00000498719 IGLC3P0DOY3 106 aa6.9□□□□□ -1.3
FN1-227ENST00000498719 HTR1DP28221 377 aa6.9□□□□□ -1.3
FN1-227ENST00000498719 LINC00173Q6ZV60 143 aa6.9□□□□□ -1.3
FN1-227ENST00000498719 Q86TA4 180 aa6.9□□□□□ -1.3
FN1-227ENST00000498719 NEXN-AS1Q8NBZ9 246 aa6.9□□□□□ -1.3
FN1-227ENST00000498719 MRAP2Q96G30 205 aa6.9□□□□□ -1.3
FN1-227ENST00000498719 SPANXB1Q9NS25 103 aaPredicted RBP6.9□□□□□ -1.3
FN1-227ENST00000498719 TP73-AS1Q9UF72 201 aa6.9□□□□□ -1.3
FN1-227ENST00000498719 ITPR1Q14643 2758 aa6.9□□□□□ -1.3
FN1-227ENST00000498719 COL8A1P27658 744 aa6.9□□□□□ -1.31
FN1-227ENST00000498719 SAA4P35542 130 aa6.9□□□□□ -1.31
FN1-227ENST00000498719 ZNF138P52744 262 aa6.9□□□□□ -1.31
FN1-227ENST00000498719 ATP5L2Q7Z4Y8 100 aa6.9□□□□□ -1.31
FN1-227ENST00000498719 hDV102S1A0JD36 115 aa6.89□□□□□ -1.31
FN1-227ENST00000498719 C2orf70A6NJV1 201 aa6.89□□□□□ -1.31
FN1-227ENST00000498719 M0R3E3 92 aa6.89□□□□□ -1.31
FN1-227ENST00000498719 NUDT3O95989 172 aa6.89□□□□□ -1.31
FN1-227ENST00000498719 SEC61BP60468 96 aaKnown RBP6.89□□□□□ -1.31
FN1-227ENST00000498719 Q6ZN92 141 aa6.89□□□□□ -1.31
FN1-227ENST00000498719 OR8B2Q96RD0 313 aa6.89□□□□□ -1.31
FN1-227ENST00000498719 PRO0628Q9UI54 55 aa6.89□□□□□ -1.31
FN1-227ENST00000498719 IL4P05112 153 aa6.89□□□□□ -1.31
FN1-227ENST00000498719 HES1Q14469 280 aa6.89□□□□□ -1.31
FN1-227ENST00000498719 OR8B3Q8NGG8 313 aa6.89□□□□□ -1.31
FN1-227ENST00000498719 ZC2HC1AQ96GY0 325 aa6.89□□□□□ -1.31
FN1-227ENST00000498719 OTORQ9NRC9 128 aa6.89□□□□□ -1.31
FN1-227ENST00000498719 IGHV3-23P01764 117 aa6.88□□□□□ -1.31
FN1-227ENST00000498719 STPG4Q8N801 248 aa6.88□□□□□ -1.31
FN1-227ENST00000498719 ZNF491Q8N8L2 437 aa6.88□□□□□ -1.31
FN1-227ENST00000498719 ARPC1AQ92747 370 aa6.88□□□□□ -1.31
FN1-227ENST00000498719 ZNF492Q9P255 531 aa6.88□□□□□ -1.31
FN1-227ENST00000498719 CELSR2Q9HCU4 2923 aa6.88□□□□□ -1.31
FN1-227ENST00000498719 TRBV19A0A075B6N1 114 aa6.88□□□□□ -1.31
FN1-227ENST00000498719 A0A087WZ39 114 aa6.88□□□□□ -1.31
FN1-227ENST00000498719 SMAGPQ0VAQ4 97 aa6.88□□□□□ -1.31
FN1-227ENST00000498719 TMEM86BQ8N661 226 aa6.88□□□□□ -1.31
FN1-227ENST00000498719 GATD1Q8NB37 220 aa6.88□□□□□ -1.31
FN1-227ENST00000498719 SHANK2-AS3Q9BTD1 123 aa6.88□□□□□ -1.31
FN1-227ENST00000498719 TMEM14CQ9P0S9 112 aa6.88□□□□□ -1.31
FN1-227ENST00000498719 UQCR10Q9UDW1 63 aa6.88□□□□□ -1.31
FN1-227ENST00000498719 IGHV1-24A0A0C4DH33 117 aa6.87□□□□□ -1.31
FN1-227ENST00000498719 ARMS2P0C7Q2 107 aa6.87□□□□□ -1.31
FN1-227ENST00000498719 IGLL1P15814 213 aa6.87□□□□□ -1.31
FN1-227ENST00000498719 HNRNPA3P51991 378 aaKnown RBP6.87□□□□□ -1.31
FN1-227ENST00000498719 NDPQ00604 133 aa6.87□□□□□ -1.31
FN1-227ENST00000498719 TMEM97Q5BJF2 176 aa6.87□□□□□ -1.31
FN1-227ENST00000498719 C1orf195Q5TG92 126 aa6.87□□□□□ -1.31
FN1-227ENST00000498719 BPIFA4PQ86YQ2 179 aa6.87□□□□□ -1.31
FN1-227ENST00000498719 DYNAPQ8N1N2 210 aa6.87□□□□□ -1.31
FN1-227ENST00000498719 LY6G5BQ8NDX9 201 aa6.87□□□□□ -1.31
FN1-227ENST00000498719 DPM3Q9P2X0 92 aa6.87□□□□□ -1.31
FN1-227ENST00000498719 PSG8Q9UQ74 426 aa6.87□□□□□ -1.31
FN1-227ENST00000498719 TIMM8BQ9Y5J9 83 aaPredicted RBP6.87□□□□□ -1.31
FN1-227ENST00000498719 IGHV3OR16-8A0A075B7F1 116 aa6.87□□□□□ -1.31
FN1-227ENST00000498719 LOC102724200A0A096LPH7 203 aaPredicted RBP6.87□□□□□ -1.31
FN1-227ENST00000498719 H3BRN7 92 aa6.87□□□□□ -1.31
FN1-227ENST00000498719 HLA-DRB1P01911 266 aa6.87□□□□□ -1.31
FN1-227ENST00000498719 CRIP1P50238 77 aa6.87□□□□□ -1.31
FN1-227ENST00000498719 RIGQ13278 110 aa6.87□□□□□ -1.31
FN1-227ENST00000498719 BEAN1Q3B7T3 259 aa6.87□□□□□ -1.31
FN1-227ENST00000498719 Q6ZVQ6 151 aa6.87□□□□□ -1.31
FN1-227ENST00000498719 MAP6D1Q9H9H5 199 aa6.87□□□□□ -1.31
FN1-227ENST00000498719 SAMD13Q5VXD3 122 aa6.86□□□□□ -1.31
FN1-227ENST00000498719 C8orf49Q96NF6 230 aa6.86□□□□□ -1.31
FN1-227ENST00000498719 GFRA4Q9GZZ7 299 aa6.86□□□□□ -1.31
FN1-227ENST00000498719 LAMTOR2Q9Y2Q5 125 aa6.86□□□□□ -1.31
FN1-227ENST00000498719 IGHV3-35A0A0C4DH35 117 aa6.86□□□□□ -1.31
FN1-227ENST00000498719 NCBP2LA6PVI3 153 aaKnown RBP6.86□□□□□ -1.31
FN1-227ENST00000498719 SMKR1H3BMG3 65 aa6.86□□□□□ -1.31
FN1-227ENST00000498719 MRPS12O15235 138 aaKnown RBP6.86□□□□□ -1.31
FN1-227ENST00000498719 ZNF207O43670 478 aaKnown RBP6.86□□□□□ -1.31
FN1-227ENST00000498719 GNG7O60262 68 aa6.86□□□□□ -1.31
FN1-227ENST00000498719 IGHV4-31P0DP07 118 aa6.86□□□□□ -1.31
FN1-227ENST00000498719 TSPOP30536 169 aa6.86□□□□□ -1.31
FN1-227ENST00000498719 HINT1P49773 126 aaPredicted RBP6.86□□□□□ -1.31
FN1-227ENST00000498719 OR11H6Q8NGC7 330 aa6.86□□□□□ -1.31
FN1-227ENST00000498719 ZNF414Q96IQ9 312 aa6.86□□□□□ -1.31
FN1-227ENST00000498719 RNF5Q99942 180 aa6.86□□□□□ -1.31
FN1-227ENST00000498719 TMEM70Q9BUB7 260 aa6.86□□□□□ -1.31
FN1-227ENST00000498719 TRAV9-2A0A087WT02 112 aa6.85□□□□□ -1.31
FN1-227ENST00000498719 TMSB15BA0A087X1C1 80 aa6.85□□□□□ -1.31
FN1-227ENST00000498719 MUC21A0A0G2JKD1 596 aa6.85□□□□□ -1.31
FN1-227ENST00000498719 MUC21A0A140T8X8 626 aa6.85□□□□□ -1.31
FN1-227ENST00000498719 CKS1BP61024 79 aa6.85□□□□□ -1.31
FN1-227ENST00000498719 MUC21Q5SSG8 566 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 548.8 ms