RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 A0A087X0K7 114 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 TRAV2A0A0B4J234 112 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 TRAV1-1A0A0B4J248 108 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 A0A1B0GV50 99 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 OR4C46A6NHA9 309 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 TSPAN4O14817 238 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 MRPS12O15235 138 aaKnown RBP3.69□□□□□ -1.82
FXN-205ENST00000498653 OR10J4P0C629 311 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 NBEAP1P0C6P0 100 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 PYYP10082 97 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 ID1P41134 155 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 TFPI2P48307 235 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 PPT1P50897 306 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 FGF8P55075 233 aaPredicted RBP3.69□□□□□ -1.82
FXN-205ENST00000498653 IFITM2Q01629 132 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 GUCA2BQ16661 112 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 SAMD13Q5VXD3 122 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 TMEM61Q8N0U2 210 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 GBGT1Q8N5D6 347 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 C11orf45Q8TAV5 145 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 BLNKQ8WV28 456 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 FXYD5Q96DB9 178 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 SPAG8Q99932 426 aaPredicted RBP3.69□□□□□ -1.82
FXN-205ENST00000498653 SLC50A1Q9BRV3 221 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 MS4A6AQ9H2W1 248 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 HRH4Q9H3N8 390 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 NRN1Q9NPD7 142 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 TMEM167BQ9NRX6 74 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 TP53TG1Q9Y2A0 90 aa3.69□□□□□ -1.82
FXN-205ENST00000498653 FCGBPQ9Y6R7 5405 aaPredicted RBP3.68□□□□□ -1.82
FXN-205ENST00000498653 TRBV19A0A075B6N1 114 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 LOC102723971A0A1B0GUV8 181 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 IZUMO1RA6ND01 250 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 H3BQ15 152 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 H3BTX0 84 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 K7EQG2 157 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 ISLRO14498 428 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 ZNF253O75346 499 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 IFNA1P01562 189 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 AMBPP02760 352 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 SNRPCP09234 159 aaKnown RBP3.68□□□□□ -1.82
FXN-205ENST00000498653 IGLC2P0DOY2 106 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 PSMB3P49720 205 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 CMC4P56277 68 aaPredicted RBP3.68□□□□□ -1.82
FXN-205ENST00000498653 PSG9Q00887 426 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 FOXI1Q12951 378 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 PDE6HQ13956 83 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 SUN5Q8TC36 379 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 AAMDCQ9H7C9 122 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 ZNF586Q9NXT0 402 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 CLEC5AQ9NY25 188 aa3.68□□□□□ -1.82
FXN-205ENST00000498653 A0A1W2PRE2 83 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 PGPA6NDG6 321 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 SLC17A3O00476 420 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 SOCS3O14543 225 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 PAGE4O60829 102 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 NDUFB4O95168 129 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 NMBP08949 121 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 TAGLN2P37802 199 aaKnown RBP3.67□□□□□ -1.82
FXN-205ENST00000498653 CSN1S1P47710 185 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 CD81P60033 236 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 UBE2G2P60604 165 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 SNRPD3P62318 126 aaKnown RBP3.67□□□□□ -1.82
FXN-205ENST00000498653 RANP62826 216 aaKnown RBP3.67□□□□□ -1.82
FXN-205ENST00000498653 CCL20P78556 96 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 PSG3Q16557 428 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 DEFB135Q30KP9 77 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 CLLU1Q5K131 121 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 CST9LP1Q5W188 147 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 ZNF738Q8NE65 137 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 DCANP1Q8TF63 244 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 PCNPQ8WW12 178 aaKnown RBP3.67□□□□□ -1.82
FXN-205ENST00000498653 LINC00052Q96N35 136 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 NKX6-2Q9C056 277 aaPredicted RBP3.67□□□□□ -1.82
FXN-205ENST00000498653 Q9H3A6 140 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 MANBALQ9NQG1 85 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 ZNF331Q9NQX6 463 aaPredicted RBP3.67□□□□□ -1.82
FXN-205ENST00000498653 OTORQ9NRC9 128 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 GNG13Q9P2W3 67 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 PRELID1Q9Y255 219 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 ARL2-SNX15V9GYD0 113 aa3.67□□□□□ -1.82
FXN-205ENST00000498653 TRAV8-2A0A0B4J237 113 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 RBFOX3A6NFN3 312 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 FAM74A7A6NL05 159 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 OR11H12B2RN74 326 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 SPRY2O43597 315 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 NUDT3O95989 172 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 SLC25A5P05141 298 aaKnown RBP3.66□□□□□ -1.82
FXN-205ENST00000498653 CD7P09564 240 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 ZNF688P0C7X2 276 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 HLA-DMBP28068 263 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 DEFB131AP59861 70 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 PSMG4Q5JS54 123 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 EXOC3-AS1Q8N2X6 119 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 FAM24BQ8N5W8 94 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 RNF182Q8N6D2 247 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 ARL6IP6Q8N6S5 226 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 LYPD6BQ8NI32 183 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 CMTM2Q8TAZ6 248 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms