RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 MEF2BQ02080 365 aaPredicted RBP10.44□□□□□ -0.74
USP11-212ENST00000497179 Q86TA4 180 aa10.44□□□□□ -0.74
USP11-212ENST00000497179 C2CD4CQ8TF44 421 aa10.44□□□□□ -0.74
USP11-212ENST00000497179 C11orf52Q96A22 123 aa10.44□□□□□ -0.74
USP11-212ENST00000497179 FMC1Q96HJ9 113 aa10.44□□□□□ -0.74
USP11-212ENST00000497179 NIPSNAP3BQ9BS92 247 aa10.44□□□□□ -0.74
USP11-212ENST00000497179 NDFIP1Q9BT67 221 aa10.44□□□□□ -0.74
USP11-212ENST00000497179 TRBV6-1A0A0K0K1D8 114 aa10.43□□□□□ -0.74
USP11-212ENST00000497179 ZNF324O75467 553 aaPredicted RBP10.43□□□□□ -0.74
USP11-212ENST00000497179 RNASE4P34096 147 aaKnown RBP10.43□□□□□ -0.74
USP11-212ENST00000497179 PRNTQ86SH4 94 aa10.43□□□□□ -0.74
USP11-212ENST00000497179 LINC01587Q99440 93 aa10.43□□□□□ -0.74
USP11-212ENST00000497179 TREM1Q9NP99 234 aa10.43□□□□□ -0.74
USP11-212ENST00000497179 VAX2Q9UIW0 290 aa10.43□□□□□ -0.74
USP11-212ENST00000497179 A0A0J9YWU9 116 aa10.42□□□□□ -0.74
USP11-212ENST00000497179 PDE6DO43924 150 aa10.42□□□□□ -0.74
USP11-212ENST00000497179 TAS2R60P59551 318 aa10.42□□□□□ -0.74
USP11-212ENST00000497179 UBE2G1P62253 170 aa10.42□□□□□ -0.74
USP11-212ENST00000497179 TMEM183BQ1AE95 376 aa10.42□□□□□ -0.74
USP11-212ENST00000497179 RRN3P1Q2M238 152 aa10.42□□□□□ -0.74
USP11-212ENST00000497179 SAPCD1Q5SSQ6 148 aa10.42□□□□□ -0.74
USP11-212ENST00000497179 Q6AWC8 147 aa10.42□□□□□ -0.74
USP11-212ENST00000497179 S100A9P06702 114 aaKnown RBP10.41□□□□□ -0.74
USP11-212ENST00000497179 PCNPQ8WW12 178 aaKnown RBP10.41□□□□□ -0.74
USP11-212ENST00000497179 PYGO2Q9BRQ0 406 aa10.41□□□□□ -0.74
USP11-212ENST00000497179 LINC00467Q9BRT7 94 aa10.41□□□□□ -0.74
USP11-212ENST00000497179 TMEM189A5PLL7 270 aa10.4□□□□□ -0.74
USP11-212ENST00000497179 RBFOX3A6NFN3 312 aa10.4□□□□□ -0.74
USP11-212ENST00000497179 ZNF705GA8MUZ8 300 aaPredicted RBP10.4□□□□□ -0.74
USP11-212ENST00000497179 DEFB4AO15263 64 aa10.4□□□□□ -0.74
USP11-212ENST00000497179 LTAP01374 205 aa10.4□□□□□ -0.74
USP11-212ENST00000497179 SMUG1Q53HV7 270 aa10.4□□□□□ -0.74
USP11-212ENST00000497179 ZNF506Q5JVG8 444 aa10.4□□□□□ -0.74
USP11-212ENST00000497179 Q6ZQT7 251 aa10.4□□□□□ -0.74
USP11-212ENST00000497179 COX8CQ7Z4L0 72 aa10.4□□□□□ -0.74
USP11-212ENST00000497179 C8orf49Q96NF6 230 aa10.4□□□□□ -0.74
USP11-212ENST00000497179 WWC2-AS2Q96NR7 200 aa10.4□□□□□ -0.74
USP11-212ENST00000497179 ZFP30Q9Y2G7 519 aa10.4□□□□□ -0.74
USP11-212ENST00000497179 GCGP01275 180 aa10.39□□□□□ -0.75
USP11-212ENST00000497179 PRM2P04554 102 aa10.39□□□□□ -0.75
USP11-212ENST00000497179 IFITM2Q01629 132 aa10.39□□□□□ -0.75
USP11-212ENST00000497179 TOR2AQ5JU69 321 aa10.39□□□□□ -0.75
USP11-212ENST00000497179 ZNF767PQ75MW2 155 aa10.39□□□□□ -0.75
USP11-212ENST00000497179 FAM210AQ96ND0 272 aa10.39□□□□□ -0.75
USP11-212ENST00000497179 IGHV1OR15-1A0A075B7D0 117 aa10.38□□□□□ -0.75
USP11-212ENST00000497179 TRAV21A0A0B4J279 112 aa10.38□□□□□ -0.75
USP11-212ENST00000497179 NDUFS6O75380 124 aaKnown RBP10.38□□□□□ -0.75
USP11-212ENST00000497179 AZU1P20160 251 aa10.38□□□□□ -0.75
USP11-212ENST00000497179 RPL35P42766 123 aaKnown RBP10.38□□□□□ -0.75
USP11-212ENST00000497179 ZNF80P51504 273 aaPredicted RBP10.38□□□□□ -0.75
USP11-212ENST00000497179 ZNF493Q6ZR52 646 aa10.38□□□□□ -0.75
USP11-212ENST00000497179 EIF4E3Q8N5X7 224 aaKnown RBP10.38□□□□□ -0.75
USP11-212ENST00000497179 RNASE8Q8TDE3 154 aaKnown RBP10.38□□□□□ -0.75
USP11-212ENST00000497179 TMEM263Q8WUH6 116 aaKnown RBP10.38□□□□□ -0.75
USP11-212ENST00000497179 C16orf74Q96GX8 76 aa10.38□□□□□ -0.75
USP11-212ENST00000497179 DERL1Q9BUN8 251 aa10.38□□□□□ -0.75
USP11-212ENST00000497179 ANXA2RQ3ZCQ2 193 aa10.37□□□□□ -0.75
USP11-212ENST00000497179 ZC2HC1AQ96GY0 325 aa10.37□□□□□ -0.75
USP11-212ENST00000497179 MED9Q9NWA0 146 aa10.37□□□□□ -0.75
USP11-212ENST00000497179 PLAC8L1A1L4L8 177 aa10.36□□□□□ -0.75
USP11-212ENST00000497179 TMEM250H0YL14 139 aa10.36□□□□□ -0.75
USP11-212ENST00000497179 RGS13O14921 159 aa10.36□□□□□ -0.75
USP11-212ENST00000497179 PFN1P07737 140 aaKnown RBP10.36□□□□□ -0.75
USP11-212ENST00000497179 HTN1P15515 57 aa10.36□□□□□ -0.75
USP11-212ENST00000497179 RAB14P61106 215 aa10.36□□□□□ -0.75
USP11-212ENST00000497179 TDRG1Q3Y452 100 aa10.36□□□□□ -0.75
USP11-212ENST00000497179 TMEM183AQ8IXX5 376 aa10.36□□□□□ -0.75
USP11-212ENST00000497179 MLST8Q9BVC4 326 aa10.36□□□□□ -0.75
USP11-212ENST00000497179 EIF5A2Q9GZV4 153 aaKnown RBP10.36□□□□□ -0.75
USP11-212ENST00000497179 CBY3A6NI87 242 aa10.35□□□□□ -0.75
USP11-212ENST00000497179 EMP1P54849 157 aa10.35□□□□□ -0.75
USP11-212ENST00000497179 CENPWQ5EE01 88 aa10.35□□□□□ -0.75
USP11-212ENST00000497179 MUC21Q5SSG8 566 aa10.35□□□□□ -0.75
USP11-212ENST00000497179 FAM159AQ6UWV7 190 aa10.35□□□□□ -0.75
USP11-212ENST00000497179 BAGE2Q86Y30 109 aa10.35□□□□□ -0.75
USP11-212ENST00000497179 IL17DQ8TAD2 202 aa10.35□□□□□ -0.75
USP11-212ENST00000497179 CELA1Q9UNI1 258 aa10.35□□□□□ -0.75
USP11-212ENST00000497179 TEX48A0A1B0GUV7 120 aa10.34□□□□□ -0.75
USP11-212ENST00000497179 CLLU1Q5K131 121 aa10.34□□□□□ -0.75
USP11-212ENST00000497179 NHLRC2Q8NBF2 726 aa10.34□□□□□ -0.75
USP11-212ENST00000497179 C11orf72Q8NBR9 251 aa10.34□□□□□ -0.75
USP11-212ENST00000497179 C11orf45Q8TAV5 145 aa10.34□□□□□ -0.75
USP11-212ENST00000497179 C11orf21Q9P2W6 132 aa10.34□□□□□ -0.75
USP11-212ENST00000497179 DKK2Q9UBU2 259 aa10.34□□□□□ -0.75
USP11-212ENST00000497179 NAGKQ9UJ70 344 aa10.34□□□□□ -0.75
USP11-212ENST00000497179 TRBV20OR9-2A0A075B6H5 130 aa10.33□□□□□ -0.76
USP11-212ENST00000497179 TRGV11A0A075B6L2 103 aa10.33□□□□□ -0.76
USP11-212ENST00000497179 RAB19A4D1S5 217 aa10.33□□□□□ -0.76
USP11-212ENST00000497179 LYRM9A8MSI8 78 aa10.33□□□□□ -0.76
USP11-212ENST00000497179 FABP5P3A8MUU1 101 aa10.33□□□□□ -0.76
USP11-212ENST00000497179 SPART-AS1P0CW21 52 aa10.33□□□□□ -0.76
USP11-212ENST00000497179 GNG4P50150 75 aa10.33□□□□□ -0.76
USP11-212ENST00000497179 CRIP1P50238 77 aa10.33□□□□□ -0.76
USP11-212ENST00000497179 ZNF674Q2M3X9 581 aa10.33□□□□□ -0.76
USP11-212ENST00000497179 IBA57Q5T440 356 aaKnown RBP10.33□□□□□ -0.76
USP11-212ENST00000497179 FAM162BQ5T6X4 162 aa10.33□□□□□ -0.76
USP11-212ENST00000497179 FAM222AQ5U5X8 452 aa10.33□□□□□ -0.76
USP11-212ENST00000497179 SMIM12Q96EX1 92 aa10.33□□□□□ -0.76
USP11-212ENST00000497179 KCNS1Q96KK3 526 aa10.33□□□□□ -0.76
USP11-212ENST00000497179 TP53TG3Q9ULZ0 132 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms